| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 971,679 | A→G | 7.3% | intergenic (+34/‑30) | yajC → / → secD | protein translocase subunit YajC/protein translocase subunit SecD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 971,679 | 0 | A | G | 7.3% | 237.5 / 6.4 | 82 | intergenic (+34/‑30) | yajC/secD | protein translocase subunit YajC/protein translocase subunit SecD |
| Reads supporting (aligned to +/- strand): ref base A (44/31); new base G (3/3); total (47/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.92e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.81e-01 | |||||||||||
TTCCGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGATCAGCGGT > NC_002947/971540‑971825 | ttCCGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGTTGCGCGcccc > 4:247081/1‑148 (MQ=255) ccGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCGGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGTTGCGCGCCCcga < 5:263914/148‑2 (MQ=255) cGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGTTGCGCGcccc < 8:134286/145‑1 (MQ=255) cGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGTTGCGCGcccc > 7:134286/1‑145 (MQ=255) gATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTc > 2:55723/1‑149 (MQ=255) aCTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGTTGCGCGCCCcgactggaa < 3:247081/148‑8 (MQ=255) gtgCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGggcg < 1:132202/148‑1 (MQ=255) cTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGt > 8:35778/1‑149 (MQ=255) gAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTg < 1:55723/147‑1 (MQ=255) gAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGAt > 4:286420/1‑149 (MQ=255) gAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGAt > 1:336144/1‑149 (MQ=255) aaGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATg > 6:356490/1‑149 (MQ=255) aGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGc > 7:220166/1‑149 (MQ=255) tgtCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTg < 2:271760/149‑1 (MQ=255) tgcccGACACTCTCTAGCTTATGTACAACCTGGGCGCCATGGCTGCCACCGTGCCAAAAGTAACCCGCACGGCATTCTTAGTTACCGGTTTTATTTTCCCGTCGGGGCCCGCACCGCCCCCCGCGTCTTGAACGGGCGGCGTGATGCt < 8:211881/145‑1 (MQ=255) tCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGaa > 4:100186/1‑149 (MQ=255) cGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTTAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAAc < 5:356490/148‑1 (MQ=255) cacTGTCGAGCTTAAGTTCCAGAAGGGTGCCATTGCTGCGACCGTGCAAAAAGGTACGCTCAAGGCTATCTGATTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACaaa < 7:292821/148‑1 (MQ=255) tGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATc > 8:93535/1‑149 (MQ=255) tGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATc > 3:70578/1‑149 (MQ=255) tCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCct > 2:4260/1‑149 (MQ=255) aGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCCGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCGTGAACGGGCGGCGTGATGCTGAACAAATATCGTCtg > 8:233476/1‑149 (MQ=255) gCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCtgt < 3:286420/149‑1 (MQ=255) cTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCtgtg < 7:35778/149‑1 (MQ=255) aaGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCACGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGa > 1:158135/1‑148 (MQ=255) gTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGaaa > 7:38633/1‑148 (MQ=255) ttCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAata > 4:154526/1‑149 (MQ=255) cAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGCTGCTGAACAAATATCCTCTGTGGAATTATg > 4:281619/1‑148 (MQ=255) cAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATg < 3:100186/148‑1 (MQ=255) cAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATg < 7:93535/148‑1 (MQ=255) gAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCCCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCAc < 2:158135/149‑1 (MQ=255) tGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATc > 6:116294/1‑125 (MQ=255) tGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATc > 6:111124/1‑125 (MQ=255) aTTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCt > 1:6855/1‑149 (MQ=255) aTTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCt > 4:166818/1‑149 (MQ=255) aTTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCt > 7:223890/1‑149 (MQ=255) gcGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAat < 7:17980/127‑1 (MQ=255) gcGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGAGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAat > 8:17980/1‑127 (MQ=255) cccTGCCAAAAGGTCCGCTCACGGCTATCTGATTTCCCGTTTTTATTTTCCAGGCGGGGCGCGAAACGGGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACtggtg < 2:336144/149‑1 (MQ=255) tGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTggtggtt > 3:39276/1‑148 (MQ=255) cAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAat > 5:53890/1‑117 (MQ=255) cAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGt > 4:112837/1‑149 (MQ=255) cAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGt > 6:29257/1‑149 (MQ=255) cAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCACCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCTTGCTGGTACTGGTGGTCGGt > 5:214578/1‑149 (MQ=255) aaaaGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGtt < 5:316024/149‑1 (MQ=255) aGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCa < 3:296126/149‑1 (MQ=255) ggTACGCTCAAGGCTATCTTAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCAt < 8:223890/149‑1 (MQ=255) ggTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTg < 3:134331/90‑1 (MQ=255) ggTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTg > 4:134331/1‑90 (MQ=255) gTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTAc < 3:215912/132‑1 (MQ=255) gTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTAc > 4:215912/1‑132 (MQ=255) gCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTAtt < 8:220166/149‑1 (MQ=255) tCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTcc > 7:187131/1‑149 (MQ=255) gCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCAt < 7:292594/137‑1 (MQ=255) gCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCAt > 8:292594/1‑137 (MQ=255) gCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTcc < 3:154526/149‑1 (MQ=255) tATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTccc > 4:119744/1‑148 (MQ=255) gAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTATCATTTATTCCGCTCCCAACctc > 3:165999/1‑149 (MQ=255) aGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACctc > 3:161126/1‑148 (MQ=255) gTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTa > 6:64713/1‑149 (MQ=255) cGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTTGGTTTCATTTATTCCGCTCCCAACCTCTACCCgg < 4:39276/149‑1 (MQ=255) cGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCg > 5:181923/1‑148 (MQ=255) ggTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGa < 1:4260/149‑1 (MQ=255) gTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGAt > 2:194111/1‑149 (MQ=255) gTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCGCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGTTTTAATTTATTCCGCTCCCAACATCTACCCGGAt > 2:199647/1‑149 (MQ=255) ttttATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTACTCCGCTCCCAACCTCTAcc > 6:246439/1‑143 (MQ=255) ttttATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTACTCCGCTCCCAACCTCTAcc < 5:246439/143‑1 (MQ=255) tATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGTCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCTTGCTGGTCCTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGAc < 5:251219/148‑1 (MQ=255) ttCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCcgg < 4:161126/148‑1 (MQ=255) ttCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCcgg < 8:187131/148‑1 (MQ=255) gacgcGGGGCGCGTTGCGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTTGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGCACcggcgg > 1:155282/5‑148 (MQ=255) cAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCcggcgg > 2:182420/1‑148 (MQ=255) aGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTa < 8:38633/149‑1 (MQ=255) gggCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTa > 2:223016/1‑144 (MQ=255) gggCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGAt < 4:70578/149‑1 (MQ=255) gcgcgcAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGAt > 5:8043/1‑147 (MQ=255) gcgcAACGCGCCGAGCGTCTTGAACGGGCGGCGTGATGCTGCACAAATATCCTCTGGGGTAATATGCACTGATCGTGCTGGTACTGGAGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACACGGATGCCCCGGCGGTACaagatcgg > 6:116357/1‑142 (MQ=255) gcgcAACGCGCCCCGCGTCTTTAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGAGCCGGCGGTAc < 5:116357/141‑1 (MQ=255) gcgcAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACtgg < 8:238197/87‑1 (MQ=255) gcgcAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACtgg > 7:238197/1‑87 (MQ=255) gcgcAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTCGTACTGGTGGGCGGTTGCATTATTTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGGACAGATCAGc > 5:30929/1‑149 (MQ=255) cAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGATCAGCGGt < 5:64713/149‑1 (MQ=255) | TTCCGATGACTTCGTGGTGCTGGAAGTGTCCGACACTGTCGAGCTGAAGTTCCAGAAGGGTGCCATTGCTGCGACCCTGCCAAAAGGTACGCTCAAGGCTATCTGAGTTACCGGTTTTATTTTCCAGTCGGGGCGCGCAACGCGCCCCGCGTCTTGAACGGGCGGCGTGATGCTGAACAAATATCCTCTGTGGAAATATGCACTGATCGTGCTGGTACTGGTGGTCGGTTTCATTTATTCCGCTCCCAACCTCTACCCGGATGACCCGGCGGTACAGATCAGCGGT > NC_002947/971540‑971825 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |