| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,356,633 | A→T | 5.5% | N170I (AAC→ATC) | PP_1181 → | two‑component system response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,356,633 | 0 | A | T | 5.5% | 214.0 / 3.0 | 73 | N170I (AAC→ATC) | PP_1181 | two‑component system response regulator |
| Reads supporting (aligned to +/- strand): ref base A (29/40); new base T (2/2); total (31/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01 | |||||||||||
GCAGCGAAACCGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCAAG > NC_002947/1356489‑1356778 | gcAGCGAAACCGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCt > 6:13718/1‑149 (MQ=255) gAAACCGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCcg > 5:280455/1‑149 (MQ=255) ccGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTg > 5:231069/1‑149 (MQ=255) ccGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTg < 4:44781/149‑1 (MQ=255) ccGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTg < 8:134496/149‑1 (MQ=255) ggACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCcgcgatctgc > 8:247613/1‑143 (MQ=255) gACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCcgc < 1:153595/141‑1 (MQ=255) gACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCcgc > 2:153595/1‑141 (MQ=255) cAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGATCTGACCGGCGCCGAATTCGACATGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGAccc > 6:368739/1‑149 (MQ=255) aGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCg > 5:333082/1‑149 (MQ=255) cAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTg < 3:151849/149‑1 (MQ=255) ggtccAGGCCCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAAc < 2:290321/146‑1 (MQ=255) gcgcCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAAc < 6:280455/149‑1 (MQ=255) gcCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCGTTGCTGGc > 3:80450/1‑128 (MQ=255) gcCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCGTTGCTGGc < 4:80450/128‑1 (MQ=255) ccAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCGTTGCTGGccaa > 3:225746/1‑128 (MQ=255) ccAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCGTTGCTGGccaa < 4:225746/130‑3 (MQ=255) cAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGaa > 6:336030/1‑144 (MQ=255) cAGGACCTGGCCTTCGGTGCGCTGCATATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGAt < 1:24767/149‑1 (MQ=255) aGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGaa < 7:105795/143‑1 (MQ=255) aGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGaa > 8:105795/1‑143 (MQ=255) aCCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTc < 5:336030/149‑1 (MQ=255) ccTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCa < 4:303153/149‑1 (MQ=255) cTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCAc < 6:231069/149‑1 (MQ=255) cTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCAc < 4:187408/149‑1 (MQ=255) cTGGCCATAGGTGCGCTGCGTATAGACAACCGCCAGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCCAATTAGACCAGCTCTGGCTGTTTGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATcataac > 8:2537/1‑144 (MQ=255) tGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCAcc > 5:78482/1‑149 (MQ=255) ggCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGt < 4:269356/123‑1 (MQ=255) ggCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGt > 3:269356/1‑123 (MQ=255) ttCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATc < 2:5261/138‑1 (MQ=255) ttCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATc > 1:5261/1‑138 (MQ=255) cGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACt < 7:247613/147‑1 (MQ=255) tGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTgcgtg < 8:39749/149‑1 (MQ=255) tGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTgcgtg < 3:233686/149‑1 (MQ=255) cTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGATGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTCGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTgcgtggcgt > 6:197380/1‑149 (MQ=255) cGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTgcgtggcgtg < 3:23245/147‑1 (MQ=255) tCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTac > 2:233974/1‑149 (MQ=255) gACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTacg < 7:2537/148‑1 (MQ=255) aCAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTacgac > 4:262898/1‑149 (MQ=255) aCAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTacgac > 5:235003/1‑149 (MQ=255) aCAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTacgac < 5:227628/149‑1 (MQ=255) ccGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGc > 6:48725/1‑148 (MQ=255) ccGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGc > 2:299091/1‑148 (MQ=255) cGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGc > 7:74172/1‑147 (MQ=255) cGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGc > 6:102788/1‑147 (MQ=255) gTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTg < 8:322996/99‑1 (MQ=255) aGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTcc < 6:235003/149‑1 (MQ=255) gcgcgcCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCAt < 6:78482/149‑1 (MQ=255) gcgcgcCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCAt < 1:299091/149‑1 (MQ=255) gcCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGat < 5:13718/149‑1 (MQ=255) ggCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATcc < 5:48725/148‑1 (MQ=255) gCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCg > 4:124608/1‑148 (MQ=255) gCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGc < 8:74172/149‑1 (MQ=255) cAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCAtctc < 7:195778/149‑1 (MQ=255) gATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGaaa < 5:102788/148‑1 (MQ=255) aGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGc < 3:124608/149‑1 (MQ=255) gcccGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGcccc > 6:123585/3‑148 (MQ=255) gAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGa < 5:368739/149‑1 (MQ=255) aaTTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGAt < 1:233974/149‑1 (MQ=255) ttCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGcc < 4:290231/133‑1 (MQ=255) ttCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGcc > 3:290231/1‑133 (MQ=255) aCCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCg > 5:262786/1‑149 (MQ=255) ccTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGc < 5:123585/149‑1 (MQ=255) ccTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAAATCGGCGATGACCCGc > 3:234025/1‑149 (MQ=255) tGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGcc > 2:8108/1‑149 (MQ=255) tGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATc < 6:90314/125‑1 (MQ=255) tGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATc > 5:90314/1‑125 (MQ=255) gTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGt > 2:358859/1‑149 (MQ=255) ccAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATc < 3:262898/149‑1 (MQ=255) aGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAAATCGGCGATGACCCGCTTCAGCCGCGGTTGATCaa < 4:234025/149‑1 (MQ=255) aGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCAATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCaa < 5:197380/149‑1 (MQ=255) gCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCAAg < 6:262786/149‑1 (MQ=255) gCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCAAg < 1:8108/149‑1 (MQ=255) aaCGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCa > 2:127846/1‑68 (MQ=255) aaCGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCa < 1:127846/68‑1 (MQ=255) aaCGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGc > 4:214620/1‑90 (MQ=255) aaCGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGc < 3:214620/90‑1 (MQ=255) aaCGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGAt < 4:225190/120‑1 (MQ=255) aaCGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGAt > 3:225190/1‑120 (MQ=255) | GCAGCGAAACCGTGGACAGCAAGCGCCAGGACCTGGCCTTCGGTGCGCTGCGTATCGACAACCGCCTGCGTGAGGCGCGCCTGGGCGAGCAGTTGATCGAGCTGACCGGCGCCGAATTCGACCTGCTCTGGCTGTTGGCCAGCAACGCTGGCCGCGTGCTGACCCGTGAACAGATCTTCACCGCACTGCGTGGCGTGGGCTACGACGGCCAGGACCGCTCCATCGATATCCGCATCTCGAAAATCCGCCCCAAGATCGGCGATGACCCGCTTCAGCCGCGGTTGATCAAG > NC_002947/1356489‑1356778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |