| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,506,930 | T→C | 11.2% | intergenic (+51/‑66) | petC → / → sspA | ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,506,930 | 0 | T | C | 11.2% | 181.5 / 12.3 | 71 | intergenic (+51/‑66) | petC/sspA | ubiquinol‑‑cytochrome c reductase cytochrome c1 subunit/stringent starvation protein A |
| Reads supporting (aligned to +/- strand): ref base T (28/35); new base C (3/5); total (31/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.99e-01 | |||||||||||
AAAGCCAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCTGGTTCTGGCCGAG > NC_002947/1506782‑1507076 | aaaGCCAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTAt > 4:286771/1‑149 (MQ=255)aaaGCCAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTAt > 6:26303/1‑149 (MQ=255) ccAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGc > 5:287675/1‑148 (MQ=255) cAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGACGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCa < 5:26303/149‑1 (MQ=255) cAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTGGCAATACTGcta < 5:48851/149‑3 (MQ=255) cAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTGGCAATACTGcta < 5:54193/149‑3 (MQ=255) cAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCa < 3:286771/149‑1 (MQ=255) gcgcATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAgg > 1:266801/1‑149 (MQ=255) cgcATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTGGCAATACTGCTAGGc < 2:122630/149‑1 (MQ=255) gcATCGGCACCTATTTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGCACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGcc < 4:264867/149‑1 (MQ=255) gcATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTGGCAATACTGc > 7:28675/1‑143 (MQ=255) gcATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTGGCAATACTGc < 8:28675/143‑1 (MQ=255) cATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCa < 6:287675/149‑1 (MQ=255) aTCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAg > 6:140710/1‑144 (MQ=255) aTCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAg < 5:140710/144‑1 (MQ=255) tCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCAcc > 2:122779/1‑149 (MQ=255) tCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCAcc < 3:308093/149‑1 (MQ=255) aTGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑cgcg > 8:223926/1‑149 (MQ=255) tgtgTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGATTACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGt > 5:198107/1‑149 (MQ=255) ttGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTc < 2:307786/149‑1 (MQ=255) gCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGAAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCAt > 3:201740/1‑149 (MQ=255) tGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCAtt > 5:203381/1‑148 (MQ=255) tATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCAttt < 2:35452/147‑1 (MQ=255) tATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTa > 7:171257/1‑148 (MQ=255) tCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTTAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTaaa < 7:202427/148‑1 (MQ=255) tCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTaaa < 2:266801/148‑1 (MQ=255) atttCTTCTTCGTATTCGCCTACTTGCTCAAGCGTTAATACTGGAAGGACGTGCACTCATCACGCAGTAGTTTCTGGTTGTTCAACGCGCCCGGGGGGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGca < 3:3620/148‑1 (MQ=255) tttCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCCGG‑CGCGGTTTCATTTAAAGTTGca > 6:41358/1‑148 (MQ=255) cttcttcGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACaa < 3:215588/148‑1 (MQ=255) cttcttcGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACaa < 1:112921/148‑1 (MQ=255) tcttcGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTATGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCa > 8:227911/1‑149 (MQ=255) cttcGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGGCCGCGTTTTCATTTAAAGTTGCACaa < 7:223926/146‑1 (MQ=255) ttcGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTAATTTAAAGTTTCACAAGCAta > 8:226159/1‑148 (MQ=255) aTTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGc > 7:217961/1‑149 (MQ=255) gCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCgag < 6:203381/148‑1 (MQ=255) ccTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCATTATTGCCAGGCAACCCCGGG‑CGCGGTTTCATTTAAAGTTGCACAAGCATACCTGCgatga > 6:26242/1‑149 (MQ=255) cTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCg < 4:201740/149‑1 (MQ=255) tCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGc < 2:292203/145‑1 (MQ=255) tCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGc > 1:292203/1‑145 (MQ=255) tCAAGCGTGAATACTCGAAGGACGTGCACTGATCACGAAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGCCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTAATTTAAAGTTGCACAAGCATCCTTACGAGGAGCCGCTACa > 7:164926/1‑149 (MQ=255) aGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATgg < 6:198107/149‑1 (MQ=255) tGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGc < 2:224267/128‑1 (MQ=255) tGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGc > 1:224267/1‑128 (MQ=255) gACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTa < 5:26242/149‑1 (MQ=255) cGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCCCCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGAGCGACGAGCCGCTACATGGGCGCACCCAACAGGATAGc > 7:238528/1‑149 (MQ=255) cACTGATCACGCATTAGTTGCTGGTTGTTGAACGCGCCCGGGGTGGCCTCGCAGTATGGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTg < 5:41358/148‑1 (MQ=255) tGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTAt > 8:135876/1‑149 (MQ=255) tgcactgagtagtTTCTGGTTGTTTAAGGGGCCCGGGGTGGCCTAGCAGTTTTGCCAGGCCACCCGGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCGGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTAtt < 8:164926/141‑1 (MQ=255) ctCACGCAGTAGTTTCTGGTTGTGGACCGCGCCCGGGGTGGCCTAGCAGTATGGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTGGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTc < 8:238528/148‑1 (MQ=255) aTCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCt > 8:203600/1‑115 (MQ=255) aTCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCt < 7:203600/115‑1 (MQ=255) tCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTc < 8:171257/148‑1 (MQ=255) cACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGc > 4:93635/1‑112 (MQ=255) cACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGc < 3:93635/112‑1 (MQ=255) cACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTcc > 4:246666/1‑148 (MQ=255) cGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGAt > 2:116295/1‑149 (MQ=255) tagtTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGc < 1:122779/149‑1 (MQ=255) tGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCATGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGATGATCCGCTACATGGGCGCAACCAACATGTTATCCTGCTATTCCGATCCCGCTGATCa < 7:227911/148‑1 (MQ=39) gttgttGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTa < 7:135876/149‑1 (MQ=255) gttgAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTcc > 1:113229/1‑129 (MQ=255) gttgAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTcc < 2:113229/129‑1 (MQ=255) tgAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATtct > 1:212136/1‑148 (MQ=255) aCGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATc < 7:226159/149‑1 (MQ=255) gcCCGGGGTGGCCTGGCAATACTGCTAGGCCCCCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGATGATCACTATTATCATCGGGt > 5:23125/1‑149 (MQ=38) ccGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTc > 2:129356/1‑149 (MQ=255) ggggTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGc < 3:246666/149‑1 (MQ=255) tGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCTgg > 6:313129/1‑149 (MQ=255) ggCCTGGCAATTCTGCTAGGCCACCCCGGG‑CGCGTTTTGATTTAAAGTTGCACAAGCATCCGTTCGAGGAGCCGCTAAATGGGCGCAACCAACAGGTTAGCCTGCTATTACGATACCGCGGATAACTATTCTAAACGGGttgagatag > 4:205539/1‑141 (MQ=255) ggCCTGGCAATTCTGCTAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGtt < 3:205539/141‑1 (MQ=255) gCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCTGGTTCTgg < 8:217961/148‑1 (MQ=255) cAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCTGGTTCTGGcc < 2:212136/149‑1 (MQ=255) gTATTGCCAGGCCACCCCGTG‑CGCGTTTTCATTTAAAGTTTCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACa < 3:89403/85‑1 (MQ=255) gTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACa > 4:89403/1‑85 (MQ=255) ttGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGCTCACTATTCTCATCGGGTTCGCCTGGTTCTGGCCgag > 5:157729/1‑147 (MQ=255) | AAAGCCAGCGCATCGGCACCTATGTGTTGCTGTATCTGGCTTTCTTCTTCGTATTCGCCTACTTGCTCAAGCGTGAATACTGGAAGGACGTGCACTGATCACGCAGTAGTTTCTGGTTGTTGAACGCGCCCGGGGTGGCCTAGCAGTATTGCCAGGCCACCCCGGG‑CGCGTTTTCATTTAAAGTTGCACAAGCATCCGTGCGAGGAGCCGCTACATGGGCGCAACCAACAGGTTAGCCTGCTATTCCGATCCCGCTGATCACTATTCTCATCGGGTTCGCCTGGTTCTGGCCGAG > NC_002947/1506782‑1507076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |