Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,535,859 G→T 8.3% G290C (GGC→TGC)  argJ → glutamate N‑acetyltransferase/amino acid acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,535,8590GT 8.3% 149.8 / 3.5 48G290C (GGC→TGC) argJglutamate N‑acetyltransferase/amino acid acetyltransferase
Reads supporting (aligned to +/- strand):  ref base G (24/20);  new base T (2/2);  total (26/22)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.10e-01

GACCTGCCGGAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGATGTGAGCCTGAT  >  NC_002947/1535712‑1536007
                                                                                                                                                   |                                                                                                                                                    
gACCTGCCGGAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGtggtgg                                                                                                                                                     >  6:108647/1‑149 (MQ=255)
    tGCCGGAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTTGCCac                                                                                                                                                 >  6:16246/1‑149 (MQ=255)
     gCCGGAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAacc                                                                                                                                                <  2:317472/149‑1 (MQ=255)
     gCCGGAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAac                                                                                                                                                 >  1:356464/1‑148 (MQ=255)
      ccGGAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTTGCCac                                                                                                                                                 <  5:16246/147‑1 (MQ=255)
        ggAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAaccac                                                                                                                                              >  2:232593/1‑148 (MQ=255)
            gTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGa                                                                                                                                         <  2:356464/149‑1 (MQ=255)
              gACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGgtggtg                                                                                                                                                      >  4:316165/1‑134 (MQ=255)
              gACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGgtggtg                                                                                                                                                      <  3:316165/134‑1 (MQ=255)
               aCCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGt                                                                                                                                       <  5:225946/148‑1 (MQ=255)
                    aGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTgg                                                                                                                                 <  1:232593/149‑1 (MQ=255)
                    aGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGCGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTgg                                                                                                                                 <  3:102683/149‑1 (MQ=255)
                                  ttttCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGcc                                                                                                                   >  2:221340/1‑149 (MQ=255)
                                      cGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAATGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTg                                                                                                                <  8:145808/148‑1 (MQ=255)
                                              tGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTcg                                                                                                       >  2:232287/1‑149 (MQ=255)
                                               gAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTcgc                                                                                                      >  5:164839/1‑149 (MQ=255)
                                                aaaaaGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTcgcc                                                                                                     >  5:207518/1‑149 (MQ=255)
                                                      gCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGAt                                                                                               >  8:241630/1‑149 (MQ=255)
                                                          tgtTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATc                                                                                              >  6:169312/1‑146 (MQ=255)
                                                                          ggAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGt                                                                                                                             <  5:303134/99‑1 (MQ=255)
                                                                          ggAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGt                                                                                                                             >  6:303134/1‑99 (MQ=255)
                                                                            aaGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTcc                                                                         <  5:81580/149‑1 (MQ=255)
                                                                            aaGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTcc                                                                         >  5:2610/1‑149 (MQ=255)
                                                                            aaGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTcc                                                                         >  7:132656/1‑149 (MQ=255)
                                                                               tGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGAc                                                                      <  5:169312/149‑1 (MQ=255)
                                                                                ggCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGAc                                                                      <  1:221340/148‑1 (MQ=255)
                                                                                  cccAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGAccc                                                                    >  3:270360/1‑148 (MQ=255)
                                                                                  cccAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACCCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCg                                                                   >  8:21029/1‑149 (MQ=255)
                                                                                   ccAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCg                                                                   >  6:292221/1‑148 (MQ=255)
                                                                                    cAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTc                                                                               >  5:6851/1‑135 (MQ=255)
                                                                                    cAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTc                                                                               <  6:6851/135‑1 (MQ=255)
                                                                                     aGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAAc                                                                <  1:106531/149‑1 (MQ=255)
                                                                                     aGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAAc                                                                <  1:232287/149‑1 (MQ=255)
                                                                                      ggCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACt                                                               <  8:132656/149‑1 (MQ=255)
                                                                                       gCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTg                                                              >  5:193042/1‑149 (MQ=255)
                                                                                       gCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTAGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTcc                                                                         <  5:344081/138‑1 (MQ=255)
                                                                                       gCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTAGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTcc                                                                         >  6:344081/1‑138 (MQ=255)
                                                                                         cATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTggg                                                            <  6:207518/149‑1 (MQ=255)
                                                                                              tCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGc                                                       <  5:108647/149‑1 (MQ=255)
                                                                                                         gAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTcgccgc                                            >  5:136137/1‑149 (MQ=255)
                                                                                                              tGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGGATCCTCGCCGCCGTAg                                       <  7:21029/149‑1 (MQ=255)
                                                                                                                       gTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCTAACTGGGGTCGCATCCTCGCCGCCGTAGGCCGTGCCg                              <  6:193042/149‑1 (MQ=255)
                                                                                                                        ttCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCgg                             >  5:83977/1‑149 (MQ=255)
                                                                                                                                 gtgcagtgcaTCGGCCGTGCCACCCACCAGGCTTGCCTGGACTGCGGCTACCCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGACCTGGGGCCGCATACTCGCCGCCGTAGGCCGTGCCGGTGTACCg                      <  4:277107/147‑1 (MQ=255)
                                                                                                                                 gTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCAGGTGTACCg                      >  3:277107/1‑147 (MQ=255)
                                                                                                                                  tGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAg                   >  3:31292/1‑149 (MQ=255)
                                                                                                                                         tcctggtggtTGCCACCACCGGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACt                                                               >  6:124394/5‑98 (MQ=255)
                                                                                                                                         tcctggtggtTGCCACCACCGGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACt                                                               <  5:124394/94‑1 (MQ=255)
                                                                                                                                          aaCGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGAtgt           >  2:269994/1‑149 (MQ=255)
                                                                                                                                            cGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGAtgt           >  5:194897/1‑147 (MQ=255)
                                                                                                                                            cGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCATCCGCCCCGAACTGCGGCCGCATCCTCGCCGCCGTACGCCGTGCCGGTGTCCCGGAGCTGGAtgt           >  8:86856/1‑147 (MQ=255)
                                                                                                                                              gtggtgGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGATGTGAGc       <  6:136137/149‑1 (MQ=255)
                                                                                                                                                  tggCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCCCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGATGTGAGCCTGa   <  7:241630/149‑1 (MQ=255)
                                                                                                                                                   ggCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACAAGCCACAAATAAAAACCGCGCTGTTAGCTAACGACCCGAACATGGGCCGCAAACACCCCGCCGTAGGCCGAGACGGAGTACCCGACCAGGAAGTGAGCCAGaa  >  8:228428/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GACCTGCCGGAAGTGACCGAAGCCAGCGGCGCGCTTTTCGAAGCGCTGAAAAAGGCCGTGTTCGAAGTGTGCATGGAAGTGGCCCAGGCCATCGTCCGTGACGGCGAAGGTGCGACCAAGTTCGTGACCGTGCAGGTCAACGGTGGTGGCAACCACCAGGAGTGCCTGGACGTCGGCTACGCCGTGGCCCACTCGCCGCTGATCAAGACCGCGCTGTTCGCTTCCGACCCGAACTGGGGCCGCATCCTCGCCGCCGTAGGCCGTGCCGGTGTACCGGAGCTGGATGTGAGCCTGAT  >  NC_002947/1535712‑1536007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑