| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,562,169 | T→G | 7.6% | intergenic (‑79/‑90) | pctA ← / → PP_1372 | methyl‑accepting chemotaxis protein PctA/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,562,169 | 0 | T | G | 7.6% | 242.4 / 9.1 | 79 | intergenic (‑79/‑90) | pctA/PP_1372 | methyl‑accepting chemotaxis protein PctA/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (39/34); new base G (3/3); total (42/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01 | |||||||||||
TGAAGGCGAGTATCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGGCCAGCCAGTCGGGC > NC_002947/1562021‑1562316 | tGAAGGCGAGTATCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGt > 4:22192/1‑149 (MQ=255) aGGCGAGTATCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGAACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTccc > 3:252899/1‑149 (MQ=255) gCGAGTATCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCtt > 5:237833/1‑149 (MQ=255) aGTATCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTc < 6:237833/149‑1 (MQ=255) gTATCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCg < 4:218998/149‑1 (MQ=255) gTATCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCg < 1:69632/149‑1 (MQ=255) gTATCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGGGACTTTTCg < 7:12565/149‑1 (MQ=255) tATCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGGGACTTTTCgg < 7:178066/149‑1 (MQ=255) aTCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCgg < 4:63343/148‑1 (MQ=255) tCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCt > 4:31574/1‑149 (MQ=255) aCGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGt > 4:106595/1‑149 (MQ=255) gATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGtt > 4:162539/1‑148 (MQ=255) gATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGtt > 4:167941/1‑148 (MQ=255) aTCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTc < 8:247207/133‑1 (MQ=255) aTCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTc > 7:247207/1‑133 (MQ=255) tGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTAtt < 6:277404/149‑1 (MQ=255) gccgccAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTAtt > 2:227384/1‑148 (MQ=255) ccgccAAAAGAATATTGTTGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTaa < 3:207145/149‑1 (MQ=255) gccAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCgg < 8:117462/130‑1 (MQ=255) gccAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCgg > 7:117462/1‑130 (MQ=255) aaaaGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCg > 2:259757/1‑148 (MQ=255) aaaaGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGa < 4:307258/149‑1 (MQ=255) aaaaGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATACCGAAAAGTACCTTTTAGGCTGTTACTCTCTATTAATGCg > 3:292856/1‑148 (MQ=255) aaaGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGaa < 3:122218/149‑1 (MQ=255) aaaGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGaa < 2:301001/149‑1 (MQ=255) aaaGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGaa < 1:259757/149‑1 (MQ=255) aaGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAAt < 3:167941/149‑1 (MQ=255) aaGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAAt < 3:162539/149‑1 (MQ=255) gtgGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACAcc < 5:273666/146‑1 (MQ=255) gtgGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCca < 3:31574/148‑1 (MQ=255) gCTGAAACGAAGGCTTTTGTTCATTGCGTAATCGGTTCCGCTAAGGTTTTATATCAGTCGTTCGCACGAGTGGATCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAg < 5:304403/148‑1 (MQ=255) gAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCACGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGcc > 5:337237/1‑149 (MQ=255) ttttGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGGGACTTTTc > 6:315931/1‑97 (MQ=255) ttttGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGGGACTTTTc < 5:315931/97‑1 (MQ=255) caaggCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGAGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTAATAAGGCGAATCACACCCACAGCTATCGGCAGAATTAAGCTaaa > 6:86149/4‑149 (MQ=255) cATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTa > 7:256735/1‑147 (MQ=255) tGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGc < 2:204289/149‑1 (MQ=255) cGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCctctct < 6:249386/93‑1 (MQ=255) cGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCctctct > 5:249386/1‑93 (MQ=255) ggTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCaga < 3:22192/148‑1 (MQ=255) cTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGc < 2:348849/132‑1 (MQ=255) cTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGc > 1:348849/1‑132 (MQ=255) cTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTaaa > 8:147927/1‑149 (MQ=255) cTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTaaa < 1:227384/149‑1 (MQ=255) cTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTa > 1:58642/1‑147 (MQ=255) tAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTa > 6:204027/1‑146 (MQ=255) aGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCTAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTaaa < 5:204027/146‑1 (MQ=255) aGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAagag < 2:58642/149‑1 (MQ=255) ttttATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGa > 5:5049/1‑113 (MQ=255) ttttATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGa < 6:5049/113‑1 (MQ=255) atatCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCg < 8:256735/148‑1 (MQ=255) atatCAGGCGTTCGAACGAGTGGAGCCGTAGGTTGTGCGACATCCCGAAAAGTCACATTTCGTCTGTTCCTCTCTATTAAg > 4:287915/1‑81 (MQ=255) tCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAAt > 2:180290/1‑149 (MQ=255) aGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGACGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAAttt > 2:291815/1‑149 (MQ=255) gCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTc > 4:115430/1‑149 (MQ=255) gCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTc < 6:337237/149‑1 (MQ=255) gTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCgg > 4:222340/1‑54 (MQ=255) gTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCgg < 3:222340/54‑1 (MQ=255) gTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGa > 3:75602/1‑149 (MQ=255) cGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTaa > 6:151039/1‑102 (MQ=255) gCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCAt > 3:177695/1‑149 (MQ=255) gAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGtt < 7:147927/149‑1 (MQ=255) gAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAgg > 8:268795/1‑149 (MQ=255) gAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTATTCGGCGGTTCCTCGCTATTAAGGGGAATAACACCCACAGGGATCGGCCGCATTAAGCGAAAGCTTGAGCAGAGGATTAAAGAGCTGTCGGAATTTTCGACCATAGTTGTAgg > 1:235644/1‑149 (MQ=255) tAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCT‑AAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGc > 3:199480/1‑149 (MQ=255) tgCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGAt < 7:268795/149‑1 (MQ=255) gCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACGATCGTTGTAGGCGCGGGCCCGGATg > 4:147701/1‑149 (MQ=255) aaCATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATgg < 4:292856/148‑1 (MQ=255) cATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGgcca > 8:246307/1‑149 (MQ=255) aTCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGgccag > 6:61648/1‑149 (MQ=255) aTCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGgc < 3:65857/146‑1 (MQ=255) aTCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGgc > 4:65857/1‑146 (MQ=255) tCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGgccagc > 7:142987/1‑149 (MQ=255) ccGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCTAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGgccagc > 1:300517/1‑147 (MQ=255) ccGAAAAGGGACTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGgccagc > 6:242274/1‑147 (MQ=255) ccGAAAAGGGACTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGgccagc > 6:237058/1‑147 (MQ=255) cGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCCGCCGAATTAAGCTAAAGCTTGAGCAGAGGa < 1:29742/89‑1 (MQ=255) cGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACACACAGGTATCCGCCGAATTAAGCTAAAGCTTGAGCAGAGGa > 2:29742/1‑89 (MQ=255) gAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGGCCAGCCAGt > 1:44314/1‑149 (MQ=255) gTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGGCCAGCCAGTCGGgc < 1:180290/149‑1 (MQ=255) tCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGTGCGGGCCCGGATGGCCAGCCAGTCGGgc > 7:270834/1‑148 (MQ=255) tCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGGCCAGCCAGTCGGgc > 2:274367/1‑148 (MQ=255) | TGAAGGCGAGTATCACGATCAGTGATGCCGCCAAAAGAATCTTGTGGCTGAAACGAAGGCTTTTGTTCATGGCGTAATCGGTTCCGCTAAGGTTTTATATCAGGCGTTCGCACGAGTGGAGCCGTAGGTTGTGCAACATCCCGAAAAGTCCCTTTTCGGCTGTTCCTCTCTATTAAGGCGAATAACACCCACAGGTATCGGCCGAATTAAGCTAAAGCTTGAGCAGAGGATTAAAGAGATGTCGGAATTTTCGACCATCGTTGTAGGCGCGGGCCCGGATGGCCAGCCAGTCGGGC > NC_002947/1562021‑1562316 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |