| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,777,524 | C→G | 7.6% | intergenic (+258/+34) | PP_5476 → / ← PP_1585 | hypothetical protein/antidote protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,777,524 | 0 | C | G | 7.6% | 242.0 / 7.6 | 79 | intergenic (+258/+34) | PP_5476/PP_1585 | hypothetical protein/antidote protein |
| Reads supporting (aligned to +/- strand): ref base C (29/44); new base G (2/4); total (31/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
GCTTTAGTCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTCCA > NC_002947/1777376‑1777670 | gCTTTAGTCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑c < 6:6885/149‑1 (MQ=255) gTCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTgg > 7:209582/1‑149 (MQ=255) tCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGgc < 5:55118/149‑1 (MQ=255) ttAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGcccc > 5:63251/1‑149 (MQ=255) aaCTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑GGCGTGGCGccgcg < 6:145467/148‑4 (MQ=255) aCTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑GGCGTGGCGccgcga < 1:117745/148‑5 (MQ=255) ggCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTa < 5:343257/148‑1 (MQ=255) ggCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTa < 4:82312/148‑1 (MQ=255) ggCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCACGCGGCGCCACG‑CCCGTGGCGCCCCTGttt < 1:32737/147‑1 (MQ=255) gCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTAtt < 4:315091/149‑1 (MQ=255) gCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTAt < 1:81852/148‑1 (MQ=255) cccAGGCTTTGATGCCGTAGAGAGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCCCG‑CCCGTGGGGCACCTGTTTATTGAt > 8:227205/1‑148 (MQ=255) ccAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGAt > 4:273021/1‑147 (MQ=255) cAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAg > 1:25988/1‑149 (MQ=255) aGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAg > 1:358690/1‑148 (MQ=255) ggCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATc < 5:59640/145‑1 (MQ=255) ggCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATc > 6:59640/1‑145 (MQ=255) cTTTGAAGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGAt < 7:87762/148‑1 (MQ=255) tGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGAtgt < 7:65709/147‑1 (MQ=255) gCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGAtgt < 8:107056/143‑1 (MQ=255) gCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGAtgt > 7:107056/1‑143 (MQ=255) ccGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCaa < 6:264478/148‑1 (MQ=255) cGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGc < 8:209582/149‑1 (MQ=255) gagCGTGTAGGTCATTGGTTCCATTGGGGTTGCAACTAGCCCCAATCTCTCCGTTTTTCGTAGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGAc < 8:154202/148‑1 (MQ=255) cGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGAAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGa > 2:289429/1‑149 (MQ=255) gTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGga > 5:123375/1‑149 (MQ=255) aTTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCaa < 7:44989/130‑1 (MQ=255) aTTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCaa > 8:44989/1‑130 (MQ=255) ttGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGgaccga < 3:131888/149‑1 (MQ=255) gtgtACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGgaccgacc > 5:110782/1‑149 (MQ=255) tACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCga > 3:239495/1‑149 (MQ=255) tACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCga < 3:230912/149‑1 (MQ=255) cATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCgatg < 3:273021/149‑1 (MQ=255) cATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGAAACGATCCTCGCGGCGCCACGACCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCga < 1:289429/148‑1 (MQ=255) aTTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCgatga < 4:239495/149‑1 (MQ=255) ttGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCTCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCgatgat < 2:330200/149‑1 (MQ=255) ggggTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATAAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGAtct > 3:60690/1‑149 (MQ=255) cttgcaaccccAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGcc < 5:261053/142‑1 (MQ=255) cAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGcc < 6:110782/149‑1 (MQ=255) aaGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCg < 6:123375/149‑1 (MQ=255) tAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTTTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCgtgt < 6:11227/149‑1 (MQ=255) tAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGAt > 5:294615/1‑99 (MQ=255) tAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGAt < 6:294615/99‑1 (MQ=255) ccccAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGc > 1:23221/1‑149 (MQ=255) cccAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGAGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCt > 2:275216/1‑149 (MQ=255) ccAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGTGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGTCCAGACGCTGGACCGACCCGATGAtctc < 1:157399/134‑1 (MQ=255) ccAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCg < 8:229094/105‑1 (MQ=255) ccAATCTCTCCGTTTTTCGATGGCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCg > 7:229094/1‑105 (MQ=255) cAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGt > 6:179493/1‑149 (MQ=255) cAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGt > 2:118823/1‑149 (MQ=255) aaTCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGAGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGtt < 6:63251/149‑1 (MQ=255) tctcCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGc > 7:40317/1‑149 (MQ=255) ctcCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCt > 5:242744/1‑149 (MQ=255) tcCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCtg > 3:15883/1‑149 (MQ=255) tcCGTTTTTCGATGTCAGTCGCGCTATTATGCTGGAACGATCCTCGCGGCGACCCG‑CCCGTGGCCGCCCTGTTTATTGAAAAGGATGTCTTCAATCGACCAGACGCTGGGCCGAACCGCTGATCTCATCGCCGTGTTTCTGTTAGGCtg > 6:4387/1‑149 (MQ=255) cGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGAGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCtgt < 1:275216/148‑1 (MQ=255) gTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGCCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTgc > 1:253842/1‑149 (MQ=255) tttttCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTgcg < 6:242744/149‑1 (MQ=255) ttCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGc < 1:152924/140‑1 (MQ=255) ttCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACC‑CCCGTTGCGCCCCAGTTTTTTGATGAGGATGTGTTAAACCGACCCAACCCGGGACCCGCCCGATGATCTAAAAGCCGTGTTTCTGTTGGGCtaggaagg > 2:152924/1‑141 (MQ=255) tCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGaa < 4:15883/148‑1 (MQ=255) aGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAgg < 6:344152/148‑1 (MQ=255) gTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGcc < 3:325707/149‑1 (MQ=255) tCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCg > 4:329011/1‑149 (MQ=255) gATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCa < 8:40317/149‑1 (MQ=255) aTGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGt < 2:358690/148‑1 (MQ=255) cGGGAACGATCCTCGCGTCGGCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGGGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGa < 5:244940/148‑1 (MQ=255) gggAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGc < 3:329011/149‑1 (MQ=255) aaCGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGc > 7:91735/1‑146 (MQ=255) tCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAg > 8:2722/1‑148 (MQ=255) gcggcgCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAgg < 5:179493/147‑1 (MQ=255) gcggcgCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAg < 7:2722/146‑1 (MQ=255) gggcgCCACG‑GGCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGggt > 8:179113/2‑149 (MQ=255) ggcgCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGAACAGACGCTGGACCGACCCGATTATCTGATCGCCGTGTTGCTGTTCGGCTGTGCGCTGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGggtg < 5:4387/149‑1 (MQ=255) gcgcCACG‑GGCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAggg > 6:190805/1‑145 (MQ=255) gcgcCACG‑GGCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAggg < 5:190805/145‑1 (MQ=255) cgcCACG‑GGCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGggtggt < 7:179113/149‑1 (MQ=255) cgcCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGggtggt < 2:23221/149‑1 (MQ=255) cg‑cgcgTGGCGCCCCTGTTTATTTTTCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTCCa < 4:60690/149‑1 (MQ=255) cG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTCCa < 2:25988/149‑1 (MQ=255) cG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTCCa < 1:118823/149‑1 (MQ=255) cccGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGgac > 5:35882/1‑55 (MQ=255) cccGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGgac < 6:35882/55‑1 (MQ=255) | GCTTTAGTCGGTTTAACTTGGCGTCCCAGGCTTTGATGCCGTAGAGCGTGTAGGTCATTGTGTACATTGGGGTTGCAAGTAGCCCCAATCTCTCCGTTTTTCGATGTCAGTCGCGGGATTATGCGGGAACGATCCTCGCGGCGCCACG‑CCCGTGGCGCCCCTGTTTATTGATCAGGATGTGTTCAAGCGACCAGACGCTGGACCGACCCGATGATCTCATCGCCGTGTTGCTGTTCGGCTGTGCGCAGATCGAAGGCCGTCTGCAGGTTGAGCCAGAACTCAGGGGTGGTGTCCA > NC_002947/1777376‑1777670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |