| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,825,091 | G→C | 7.8% | R55G (CGC→GGC) | mutS ← | DNA mismatch repair protein MutS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,825,091 | 0 | G | C | 7.8% | 192.3 / 6.4 | 64 | R55G (CGC→GGC) | mutS | DNA mismatch repair protein MutS |
| Reads supporting (aligned to +/- strand): ref base G (29/29); new base C (3/2); total (32/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.72e-01 | |||||||||||
CACCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGGTGTGTG > NC_002947/1824945‑1825237 | cACCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCgcggg < 2:228359/149‑1 (MQ=255) aCCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCgcgggc > 2:232160/1‑149 (MQ=255) tgCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGTTCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGTTGGACTGGCCGGCCGACTGACCGCTGGCGGTc < 1:227246/148‑1 (MQ=255) ccTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAgg < 1:232160/149‑1 (MQ=255) ccTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAgg > 6:14239/1‑149 (MQ=255) ccTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAgg < 5:14239/149‑1 (MQ=255) cTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGat < 1:363635/149‑1 (MQ=255) tggtggCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGCGTGata > 8:104097/1‑149 (MQ=255) cGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCcagc < 4:155545/149‑1 (MQ=255) gCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATcc > 3:173304/1‑139 (MQ=255) gCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATcc < 4:173304/139‑1 (MQ=255) gCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTcg > 4:262510/1‑149 (MQ=255) gCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGACCGGAATCCCGCACATGGGGATGGACTGGACGGCCGCCTGACCGCGGGCGGTGAGGGGGATTTGCAGCAGTTTGGCGGCCttt > 7:222174/1‑149 (MQ=255) cTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCtttt < 2:161023/149‑1 (MQ=255) acaGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTc < 3:152989/148‑1 (MQ=255) aGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCa > 2:87959/1‑149 (MQ=255) aTCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATGCAGCAGTTTCGCGGCCTTTTTCGCATc > 6:17563/1‑149 (MQ=255) caccGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCg > 5:168427/1‑148 (MQ=255) accGACTCGCCGAGTATGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCg > 2:170257/1‑147 (MQ=255) tCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGAt > 5:360958/1‑149 (MQ=255) gCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGAtct > 2:73337/1‑149 (MQ=255) cGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCg < 3:273939/149‑1 (MQ=255) aGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTa < 6:168427/149‑1 (MQ=255) gACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTcgcg > 2:134773/1‑112 (MQ=255) gACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTcgcg < 1:134773/112‑1 (MQ=255) gACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTAAGGGTGATATCCAGCAGTTTAGCGGCCTTTTTCGCATA‑TTCGTAGAAGATATCGTAGAAg > 6:232244/1‑148 (MQ=255) ccAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTTATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTc < 5:232244/148‑1 (MQ=255) cAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGc > 8:273749/1‑149 (MQ=255) gCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGc < 7:104097/148‑1 (MQ=255) ccAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCgg < 1:170257/149‑1 (MQ=255) aGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTa < 6:360958/149‑1 (MQ=255) gCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAAc < 4:315123/148‑1 (MQ=255) gCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACa > 6:87962/1‑149 (MQ=255) ttCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAt > 2:305656/1‑147 (MQ=255) ccAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAg < 7:273749/148‑1 (MQ=255) cAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATCTTTCGTAGACGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGc < 1:73337/149‑1 (MQ=255) aGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGGAGTCGCCCATGCGGTAGAACAT‑CAGCTg > 6:164547/1‑149 (MQ=255) tGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑ATCTACGAAGAtgcg < 7:85062/110‑4 (MQ=255) tGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑ATCTACGAAGAtgcg > 8:85062/1‑107 (MQ=255) gAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTTATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGt < 5:339161/149‑1 (MQ=255) gAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGt > 6:302984/1‑149 (MQ=255) aaCGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCt < 7:164992/139‑1 (MQ=255) aaCGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTg > 5:147183/1‑149 (MQ=255) aCGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGc > 1:104773/1‑149 (MQ=255) ccGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGCTATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGttttt > 2:199228/1‑149 (MQ=255) cGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTc < 1:87959/149‑1 (MQ=255) tGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGGCAGGGTGATATCCCGCAGTTTCGCGGCCTTTTTAGCATC‑TTCGTTGAAGATATCGTAGAAGTAGCCCATGCGGGAGAACAT‑CAGCTGGTCCGGGGGGTGGGTTTTGAGCtga > 6:224755/1‑147 (MQ=255) gggATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGGAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCa < 5:164547/149‑1 (MQ=255) gggATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCa < 3:262510/149‑1 (MQ=255) aTGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTa < 5:87962/149‑1 (MQ=255) aTGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTa < 5:224755/149‑1 (MQ=255) ccggccgACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCgg < 8:293195/96‑1 (MQ=255) ccggccgACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCgg > 7:293195/1‑96 (MQ=255) cggccgACTGACGGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCGTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGcatc < 5:17563/149‑1 (MQ=255) cacccTGACCGCCCGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCatcatc > 8:206869/5‑149 (MQ=255) cgACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCg > 7:344262/1‑149 (MQ=255) acccTGACCGCCCGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGc < 5:26255/124‑1 (MQ=255) acccTGACCGCCCGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGc > 6:26255/4‑127 (MQ=255) gACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTTGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCgg > 2:259990/1‑149 (MQ=255) gACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCgg > 1:359573/1‑149 (MQ=255) tGACCGCGGGCGGTCATGGTGATATACATGATTTTCGCGGCCTTTTTCGGATC‑TTAGTATAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACATCCAGCTGGTCCGGGTGCTGGTTTTTCAGCtt < 1:27255/126‑1 (MQ=255) tGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCtt > 2:27255/1‑125 (MQ=255) tGACCGCCCGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAg > 1:64862/1‑90 (MQ=255) tGACCGCCCGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAg < 2:64862/90‑1 (MQ=255) aCCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCa < 7:161015/126‑1 (MQ=255) aCCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCa > 8:161015/1‑126 (MQ=255) cgcgGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCt < 2:120297/96‑1 (MQ=255) gcgggcggTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGGtgtgtg > 3:141949/1‑149 (MQ=255) | CACCGGGCCCTTGCTGGTGGCGGGGTCGCCGATCTGCTCACAGATCACCACCGACTCGCCGAGCTTGACCAGCTTGGCCAGGTAGCCTTCCAGCGAATGGAACGGAATCCCGCACATGGGGATGGACTGGCCGGCCGACTGACCGCGGGCGGTCAGGGTGATATCCAGCAGTTTCGCGGCCTTTTTCGCATC‑TTCGTAGAAGATCTCGTAGAAGTCGCCCATGCGGTAGAACAT‑CAGCTGGTCCGGGTGCTGGTTTTTCAGCTTCCAGTACTGCTGCATCATCGGGGTGTGTG > NC_002947/1824945‑1825237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |