| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 195,236 | T→C | 5.8% | S248P (TCG→CCG) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 195,236 | 0 | T | C | 5.8% | 201.9 / 2.1 | 69 | S248P (TCG→CCG) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base T (33/31); new base C (2/2); total (35/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.32e-01 | |||||||||||
CGCCACCGTTGGTCAGGCGCCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGTGGCGTGATCA > NC_002947/195088‑195383 | cGCCACCGTTGGTCAGGCGCCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGAttt < 6:363753/149‑1 (MQ=255)cGCCACCGTTGGTCAGGCGCCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGAttt > 5:165201/1‑149 (MQ=255)cGCCACCGTTGGTCAGGCGCCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGAttt > 5:363753/1‑149 (MQ=255)cGCCACCGTTGGTCAGGCGCCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGAttt < 2:360997/149‑1 (MQ=255) cGTTGGTCAGGCGCCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCa < 3:328420/149‑1 (MQ=255) gTTGGTCAGGCGCCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACAGCTTACATCGACGGTGGCCAGATTTCGGCCAc > 8:107741/1‑149 (MQ=255) gcgcCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGCCCAGTGGTAGCGTCAACGTCGCAGTTCCGCCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCAACGTGCCAgg > 3:91794/1‑149 (MQ=255) gcgcCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAgg > 4:154649/1‑149 (MQ=255) gcCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCgg > 5:8695/1‑134 (MQ=255) gcCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCgg < 6:8695/134‑1 (MQ=255) gACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGgtagta > 2:287583/1‑149 (MQ=255) caccaACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCAcc > 3:52619/1‑133 (MQ=255) caccaACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCAcc < 4:52619/133‑1 (MQ=255) caccaACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCg > 1:282508/1‑149 (MQ=255) caccaACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTAGGCCACCGTGACAGGTAGTACCg > 2:89022/1‑149 (MQ=255) caccaACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACCGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCg < 1:245285/149‑1 (MQ=255) ccaACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCAGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCggt > 8:51145/1‑149 (MQ=255) aaCCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCggtgg < 1:287583/149‑1 (MQ=255) aCCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCggtggt < 7:50919/149‑1 (MQ=255) ccTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGgtggtg > 6:268787/1‑149 (MQ=255) tAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCGACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCggc > 8:206309/1‑148 (MQ=255) tAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGc > 4:87928/1‑146 (MQ=255) tAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGc < 3:87928/146‑1 (MQ=255) aaTTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCggg < 4:138303/148‑1 (MQ=255) aaTTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGc > 7:239679/1‑149 (MQ=255) aTTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCt < 2:282508/149‑1 (MQ=255) aCTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGa < 3:154649/148‑1 (MQ=255) ctctGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGAc < 7:333856/148‑1 (MQ=255) ctctGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGAc < 5:104591/148‑1 (MQ=255) tCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGAc < 3:225824/149‑1 (MQ=255) tCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGAc < 7:51145/149‑1 (MQ=255) aaTGGTGCCGTGATCGTCATTCCGGCTGGGCAGCCCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGAAGTACCGGTGGTGGCGGGCTGCCGGTGACAtt > 6:288955/1‑149 (MQ=255) ggTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGcc > 5:348897/1‑149 (MQ=255) tGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGc < 6:348897/149‑1 (MQ=255) cGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCaaa < 8:239679/149‑1 (MQ=255) gTGATCGTCTTTCCGGCTGGGCAGACCAGTGGTAGCGTCAAGGTCGCAGGTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCTGGCTGACGGTGACATTGCCGCAAAc < 5:288955/149‑1 (MQ=255) aTCGTCATTCCGGGTGGGAAGACCAGTTGTAGCGTCAACGTCCCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACGGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGc < 4:91794/148‑1 (MQ=255) tCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGc > 6:257181/1‑147 (MQ=255) ttCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGt > 1:166648/1‑148 (MQ=255) ccGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTTATACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTa < 1:89022/148‑1 (MQ=255) cGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTAcc > 3:73682/1‑149 (MQ=255) gggCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCg > 4:237825/1‑75 (MQ=255) gggCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCg < 3:237825/75‑1 (MQ=255) aGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGAcc < 2:166648/149‑1 (MQ=255) aGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCg < 8:264411/139‑1 (MQ=255) aGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCg > 7:264411/1‑139 (MQ=255) aGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGa > 7:293129/1‑149 (MQ=255) tCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGacac > 5:174232/1‑148 (MQ=255) tCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGacac > 8:219349/1‑148 (MQ=255) aCGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTAc > 5:34419/1‑148 (MQ=255) aGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGa > 3:329353/1‑149 (MQ=255) ttCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGAcc < 6:174232/149‑1 (MQ=255) aaaCGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCg > 5:160137/1‑149 (MQ=255) acacacCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTAccc > 2:61384/1‑102 (MQ=255) acacacCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTAccc < 1:61384/102‑1 (MQ=255) cacacCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGc < 6:34419/149‑1 (MQ=255) cacCTTACATCGACGGTGGCCAGATTTCGGCCACCGTCACAGGTAGTACAGGTTGTGGCGGGATGACGGTGACATTTCAGAAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGcc > 8:173137/1‑148 (MQ=255) acCTTCCATCGACGGTGGCCAGATTGCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCGGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCaa < 4:266220/149‑1 (MQ=255) acCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGcc > 8:281867/1‑147 (MQ=255) acCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCaa < 7:219349/149‑1 (MQ=255) cTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGTCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGc > 6:270569/1‑149 (MQ=255) aCATCGCCTGTGGCCAGATTTCGGCCACCGTGACAGGAAGTACCCGTGGTTGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTg < 6:64074/149‑1 (MQ=255) aCATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGt < 7:206309/148‑1 (MQ=255) aTCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGAc > 3:49387/1‑149 (MQ=255) caCGGTGGCCGAAATCTGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTg < 7:251857/125‑1 (MQ=255) caCGGTGGCCGAAATCTGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTg > 8:251857/2‑126 (MQ=255) aCGGTGGCCGAAATCTGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGc < 5:261494/140‑1 (MQ=255) aCGGTGGCCGAAATCTGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGc > 6:261494/1‑140 (MQ=255) gTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGt < 4:73682/149‑1 (MQ=255) ggCCAGATTTCGGCCACCGTGACAGGTAGTACCGTTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGt > 1:231009/1‑137 (MQ=255) ggCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGt < 2:231009/137‑1 (MQ=255) ccAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACcg > 8:202263/1‑110 (MQ=255) ccAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACcg < 7:202263/110‑1 (MQ=255) tCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGTGGCGTGATCa < 6:160137/148‑1 (MQ=255) | CGCCACCGTTGGTCAGGCGCCGACCACCAACCTGGTAATTACTCTGTCCAATGGTGCCGTGATCGTCATTCCGGCTGGGCAGACCAGTGGTAGCGTCAACGTCGCAGTTCCGGCAAACGACACACCTTACATCGACGGTGGCCAGATTTCGGCCACCGTGACAGGTAGTACCGGTGGTGGCGGGCTGACGGTGACATTGCCGCAAACGCCAGCGGTTACCCAAGTGACCGATACAATCGACACTACAACCGCGACCCTGACCGCCTCGCCAAGCGTGACCGAAGGTGGCGTGATCA > NC_002947/195088‑195383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |