Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	1,981,092	T→G	8.6%	intergenic (+31/‑269)	rpsA → / → ihfB	30S ribosomal protein S1/integration host factor subunit beta

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	1,981,092	0	T	G	8.6%	172.5 / 6.8	58	intergenic (+31/‑269)	rpsA/ihfB	30S ribosomal protein S1/integration host factor subunit beta
Reads supporting (aligned to +/- strand):  ref base T (29/24);  new base G (2/3);  total (31/27)
Fisher's exact test for biased strand distribution p-value = 6.56e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

GAAAGACGACGCTGAAGAGCGCGAAGCTATCCAGAGCCTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGAC  >  NC_002947/1980947‑1981235                                                                                                                                                  |                                                                                                                                                 gAAAGACGACGCTGAAGAGCGCGAAGCTATCCAGAGCCTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCgg                                                                                                                                               <  3:125188/149‑1 (MQ=255)  aaaGACGACGCTGAAGAGCGCGAAGCTATCCAGAGCCTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCggg                                                                                                                                              >  2:352971/1‑149 (MQ=255)     gacgacGCTGAAGAGCGCGAAGCTATCCAGAGCCTGAAAAACGCTCCGCAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTCTTTGATCGGTAAAAAGGGCGACCCTCGGGTCg                                                                                                                                           >  4:166583/1‑149 (MQ=255)      acgacgCTGAAGAGCGCGAAGCTATCCAGAGCCTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGc                                                                                                                                          >  6:286375/1‑149 (MQ=255)         acgCTGAAGAGCGCGAAGCTATCCAGAGCCTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCGAGGGTCGCCC‑t                                                                                                                                      <  7:130335/149‑1 (MQ=255)                agagCGCGAAGCTATCCAGAGCCTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑tttttttt                                                                                                                               >  4:279329/1‑149 (MQ=255)                    cgcgAAGCTATCCAGAGCCTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTc                                                                                                                           <  8:33885/149‑1 (MQ=255)                    cgcgAAGCTATCCAGAGCCTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTc                                                                                                                           <  4:304747/149‑1 (MQ=255)                               ccAGAGCCTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAggt                                                                                                                >  5:206140/1‑149 (MQ=255)                                     ccTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTgcg                                                                                                          >  8:120157/1‑149 (MQ=255)                                               gCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCa                                                                                                <  1:352971/149‑1 (MQ=255)                                                     gAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCActgctg                                                                                          <  4:120302/149‑1 (MQ=255)                                                           gctgcCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAgg                                                                                                                 >  5:192096/1‑120 (MQ=255)                                                           gctgcCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAgg                                                                                                                 <  6:192096/120‑1 (MQ=255)                                                               ccGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGc                                                                                  <  3:166583/147‑1 (MQ=255)                                                                cGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAg                                                                               <  7:120157/149‑1 (MQ=255)                                                                    accaccATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑tttttt                                                                                                                                 >  8:276878/1‑95 (MQ=255)                                                                    accaccATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑tttttt                                                                                                                                 <  7:276878/95‑1 (MQ=255)                                                                     ccaccaTGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCActgct                                                                                           >  1:279407/1‑132 (MQ=255)                                                                     ccaccaTGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCActgct                                                                                           <  2:279407/132‑1 (MQ=255)                                                                     ccaccaTGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCtt                                                                            >  6:14598/1‑147 (MQ=255)                                                                      caccaTGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAg                                                                         >  6:330653/1‑149 (MQ=255)                                                                      caccaTGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAg                                                                         >  6:283001/1‑149 (MQ=255)                                                                             gctgcgctgcTGCGCGAAGCAATGACCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTgcggc                                                                                                        <  7:341119/111‑1 (MQ=255)                                                                             gctgcgctgcTGCGCGAAGCAATGACCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTgcggc                                                                                                        >  8:341119/1‑111 (MQ=255)                                                                               tgcgctgcTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGaa                                                                >  2:139594/1‑149 (MQ=255)                                                                               tgcgctgcTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCGAGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCg                                                                  >  6:175394/1‑147 (MQ=255)                                                                                 cgctgcTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGc                                                              <  3:312616/149‑1 (MQ=255)                                                                                 cgctgcTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGGGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGc                                                              <  3:279329/149‑1 (MQ=255)                                                                                  gctgctGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGcc                                                             >  5:132722/1‑149 (MQ=255)                                                                                    tgctgcGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCg                                                           <  5:286375/149‑1 (MQ=255)                                                                                     gctgcGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGt                                                          >  7:221921/1‑149 (MQ=255)                                                                                          gcgAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAg                                                     <  5:14598/149‑1 (MQ=255)                                                                                                cAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGaa                                                                >  2:230802/1‑132 (MQ=255)                                                                                                cAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGaa                                                                <  1:230802/132‑1 (MQ=255)                                                                                                  aTGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGt                                             <  6:206140/149‑1 (MQ=255)                                                                                                     gCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTc                                           <  1:139594/148‑1 (MQ=255)                                                                                                         aGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCcg                                      >  3:325879/1‑149 (MQ=255)                                                                                                              aaCTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCCTTTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCcgcg                                    >  3:126453/1‑147 (MQ=255)                                                                                                              aaCTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCTGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAg                                 >  3:254340/1‑149 (MQ=255)                                                                                                               aCTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCGAGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGc                                <  5:175394/149‑1 (MQ=255)                                                                                                                 tGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGaa                                  <  8:181324/145‑1 (MQ=255)                                                                                                                 tGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGaa                                  >  7:181324/1‑145 (MQ=255)                                                                                                                 tGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTGGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAg                              >  1:88555/1‑149 (MQ=255)                                                                                                                   aGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGgc                            <  2:88555/149‑1 (MQ=255)                                                                                                                          tttGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCTGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGt                                             <  3:349603/125‑1 (MQ=255)                                                                                                                          tttGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGt                                             >  4:349603/1‑125 (MQ=255)                                                                                                                             gATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGc                   <  8:221921/148‑1 (MQ=255)                                                                                                                                     aaaaGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAg          >  8:306731/1‑149 (MQ=255)                                                                                                                                     aaaaGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAg          <  5:330653/149‑1 (MQ=255)                                                                                                                                      aaaGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCa                        >  2:165264/1‑134 (MQ=255)                                                                                                                                      aaaGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGc         >  2:208864/1‑149 (MQ=255)                                                                                                                                      aaaGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCCCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCa                        <  1:165264/134‑1 (MQ=255)                                                                                                                                        aGGGCGACCCGAGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTAt               >  6:162711/1‑141 (MQ=255)                                                                                                                                        aGGGCGACCCGAGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTAt               <  5:162711/141‑1 (MQ=255)                                                                                                                                         gggCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGGACTGCTGGTACACGCCAGCTTCAGGATGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCGCTGGGCTATCTAAGCgg       >  8:115748/1‑148 (MQ=255)                                                                                                                                          ggCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCgg       >  3:143659/1‑147 (MQ=255)                                                                                                                                              aCCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGAc  >  3:18713/1‑148 (MQ=255)                                                                                                                                                  |                                                                                                                                                 GAAAGACGACGCTGAAGAGCGCGAAGCTATCCAGAGCCTGAAAAACGCTCCGGAAGCTGCTGCCGACACCACCATGGCTGCGCTGCTGCGCGAAGCAATGGCCAAGCAGAACTGAGTTCTGTTTGATCGGTAAAAAGGGCGACCCTCGGGTCGCCC‑TTTTTTTTGCTCCGCGACCAGGTGGTGCGGCGGATGGCACTGCTGGAACACGCCAGCTTCAGGCTGGCGAAGCCCGTTGTAGGAGCGGGTTCACCCGCGAAGCAGGCGCCACTGGCCTATCTAAGCGGTAGAC  >  NC_002947/1980947‑1981235

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑