| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,084,112 | T→A | 7.1% | intergenic (+16/+13) | PP_1862 → / ← PP_1863 | membrane protein/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,084,112 | 0 | T | A | 7.1% | 206.9 / 2.2 | 68 | intergenic (+16/+13) | PP_1862/PP_1863 | membrane protein/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (31/32); new base A (3/2); total (34/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATG > NC_002947/2083968‑2084257 | gCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGATGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTc < 2:332091/148‑1 (MQ=255)gCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTc < 8:219907/148‑1 (MQ=255)gCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTc < 6:192601/148‑1 (MQ=255)gCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCg < 6:203950/149‑1 (MQ=255) cGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCgg < 3:334596/149‑1 (MQ=255) tgggtggCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGccc < 7:239797/149‑1 (MQ=255) tCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGAAAATCGGCCCCaaaat < 8:43524/143‑5 (MQ=255) tCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGAAAATCGGCCCCaaaat > 7:43524/1‑139 (MQ=255) cAGGATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGa > 3:212300/1‑148 (MQ=255) aGCATCTGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGaaa < 2:76000/149‑1 (MQ=255) cATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAAcc > 8:316284/1‑149 (MQ=255) ggTGTGAAGCTGGCCCATGCGGTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATg < 2:120045/149‑1 (MQ=255) gtgtGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGt < 4:212300/149‑1 (MQ=255) gtgAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTCCGGCCGATGTTCTGTGTGTTCCTGGAGGTCTGTGCGGTGATGCTGGA‑GTTTGAGCTTTGAGATTTTGGGGCAGATTTTCGGCACCAGATCAATTGAAACCCTCAACGATgaa > 2:324475/1‑146 (MQ=255) tgAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGt > 3:298498/1‑149 (MQ=255) ggCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCAt > 1:41221/1‑149 (MQ=255) ggCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCAt > 3:181084/1‑149 (MQ=255) ccATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATg < 1:198811/147‑1 (MQ=255) ccATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATg > 2:198811/1‑147 (MQ=255) tGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAggc > 2:96781/1‑147 (MQ=255) tGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTCTGTGTTCCTGGTGGTCTCTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTc > 2:101322/1‑149 (MQ=255) gTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCTCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGt > 4:182269/1‑149 (MQ=255) ccGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGAtt < 6:144619/149‑1 (MQ=255) ggAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGAtt > 7:213050/1‑147 (MQ=255) ggAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGAtt < 8:213050/147‑1 (MQ=255) gagaAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGA‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGc < 5:264862/149‑1 (MQ=255) ggTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAggg > 2:131258/1‑149 (MQ=255) gTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAgggg < 1:131258/149‑1 (MQ=255) tATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAggggg > 2:320889/1‑149 (MQ=255) gggCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCg > 2:352288/1‑149 (MQ=255) gCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTa < 7:316284/149‑1 (MQ=255) gATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACt > 3:335107/1‑149 (MQ=255) tGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTg < 4:298498/148‑1 (MQ=255) tgtgtTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGt > 5:153787/1‑116 (MQ=255) tgtgtTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGt < 6:153787/116‑1 (MQ=255) tgtgtTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCa < 1:292663/148‑1 (MQ=255) tgtgtTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCa < 2:41221/148‑1 (MQ=255) ttCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCAt > 7:4561/1‑148 (MQ=255) cTGGTGGTCTGTGCGGTGATGCTGGCAGTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTa > 1:4319/1‑148 (MQ=255) cTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACa > 5:153473/1‑149 (MQ=255) tggtggTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATg < 3:346395/88‑1 (MQ=255) tggtggTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATg > 4:346395/1‑88 (MQ=255) gtggtCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCTCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTg < 3:182269/149‑1 (MQ=255) gtggtCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACAtt < 2:4319/148‑1 (MQ=255) gtggtCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTg > 4:108800/1‑149 (MQ=255) tCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAgg < 8:297320/113‑1 (MQ=255) tCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAgg > 7:297320/1‑113 (MQ=255) tgCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATggg < 6:153473/149‑1 (MQ=255) tgCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATgg < 1:101322/148‑1 (MQ=255) tgCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATgg < 1:96781/148‑1 (MQ=255) tgCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATgg < 4:335107/148‑1 (MQ=255) ggTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCaa > 8:195269/1‑149 (MQ=255) ggTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGA‑GGGGTCTGCGTACTGCGCACCAGCATTACATTg < 1:321167/137‑1 (MQ=255) ggTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGA‑GGGGTCTGCGTACTGCGCACCAGCATTACATTg > 2:321167/1‑137 (MQ=255) tGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCgg > 2:205274/1‑147 (MQ=255) tttGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCt < 3:108800/149‑1 (MQ=255) tGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGcc > 7:29346/1‑138 (MQ=255) tGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGcc < 8:29346/138‑1 (MQ=255) gagaTTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTc > 4:52306/1‑141 (MQ=255) gagaTTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTc < 3:52306/141‑1 (MQ=255) ttttGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGGGATTGGCGAGGGGGTCTGCGTAGTGCGCACCAGCATTACATTGGCCCTGGGCAGCTGCGGCAGCCCGTCGGTCTCGCCCAg > 2:356200/1‑149 (MQ=255) ctGGGGCCGAAAATCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTAGATTgg > 2:130025/2‑110 (MQ=255) ctGGGGCCGAAAATCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTgg < 1:130025/109‑1 (MQ=255) ctGGGGCCGAAAATCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGaa > 1:165713/2‑149 (MQ=255) ggCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGaa > 2:211117/1‑145 (MQ=255) ggCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGaa < 1:211117/145‑1 (MQ=255) ggCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCg > 8:16717/1‑149 (MQ=255) gATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATg > 3:225306/1‑149 (MQ=255) | GCGGTGGGTGGCTTGCTCAGCATCAGCTGGGGTGTGAAGCTGGCCCATGCGTTGCCGGAGAAGGTATTGCGGGCGATGTTCTGTGTGTTCCTGGTGGTCTGTGCGGTGATGCTGGC‑GTTTGAGCTTTGAGATTTTGGGGCCGATTTTCGGCCCCAGATCACTTGAAACCCTCAACGATGTAGTCGGCCATGCAGTCGGTGATTGGCGAGGGGGTCTGCGTACTGCGCACCAGCATTACATTGGCCATGGGCAACTGCGGCAGCCCTTCGCTCTCACCCAGAATGCGGATG > NC_002947/2083968‑2084257 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |