| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,282,737 | T→G | 7.2% | intergenic (‑129/+100) | PP_2010 ← / ← PP_2011 | cytochrome b561/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,282,737 | 0 | T | G | 7.2% | 342.8 / 13.2 | 120 | intergenic (‑129/+100) | PP_2010/PP_2011 | cytochrome b561/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (60/51); new base G (4/5); total (64/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.30e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
GGGGGATGAAACCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACAC > NC_002947/2282594‑2282881 | gggggATGAAACCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑c < 8:205035/149‑1 (MQ=255) ggATGAAACCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCC > 4:35444‑M1/1‑149 (MQ=255) gAAACCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCt > 5:275543/1‑149 (MQ=255) aaaCCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTc > 1:146296/1‑149 (MQ=255) aaCCCTGATGGGGCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGGGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTcc < 7:179470/149‑1 (MQ=255) aaCCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTcc > 8:150687/1‑149 (MQ=255) aCCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCCCTTCGCGGGCA‑CGCCCGCTcc > 3:209352/1‑148 (MQ=255) aCCATGATTGGTCCTCGTCATCAGGTCCGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTcc > 3:225337/1‑148 (MQ=255) ccATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCca < 1:229606/149‑1 (MQ=255) cATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTgg < 3:47653/134‑1 (MQ=255) cATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCACGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTgg > 4:47653/1‑134 (MQ=255) tGATTGGTCCTCGGCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGTACAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCcaca < 1:102587/149‑1 (MQ=255) ttGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTc > 5:338784/1‑148 (MQ=255) gTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAAc > 1:13257/1‑149 (MQ=255) gTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAAc < 7:150687/149‑1 (MQ=255) gTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAAc > 2:29892/1‑149 (MQ=255) tCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACt < 3:308878/149‑1 (MQ=255) ccTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTg > 8:42138/1‑149 (MQ=255) tCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGca > 6:84802/1‑149 (MQ=255) tCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGca > 5:9023/1‑149 (MQ=255) tCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGca > 2:331789/1‑149 (MQ=255) tCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGca > 3:82274/1‑149 (MQ=255) gtaatcaggtCTGTATGGCGCTCTTGCTGGCGCTCAGGAGTGATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGGTGCCAGCCACCTGCGTCTTCGCTGGCA‑CGCCGGCgaaggggccggagcaggcga < 8:316727‑M1/146‑21 (MQ=255) gTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGcaca < 2:325842/149‑1 (MQ=255) tcaGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑Ct > 5:22984/1‑149 (MQ=255) ggTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTgg < 2:13257/149‑1 (MQ=255) ggTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCCCTTCGCGGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGG‑Cttcc < 4:209352/149‑3 (MQ=255) gTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCt < 5:94833/110‑1 (MQ=255) gTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGA‑CTTgg > 5:225403/1‑148 (MQ=255) cacTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCGTTTTAATGGCTACCGGAAACAGATCTTTACG‑CCAGGTCTGTGAAAGATATGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACACTCCAACAGCACAGT‑CTTgg > 7:234353/3‑148 (MQ=255) tCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTgg > 7:96675/1‑147 (MQ=255) aaTGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGc < 8:33743/147‑1 (MQ=255) aaTGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCt < 2:146296/149‑1 (MQ=255) tGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGC < 1:161906‑M1/114‑1 (MQ=255) cgcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCa < 6:22984/149‑1 (MQ=255) cgcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCa < 6:6746/149‑1 (MQ=255) gcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCAGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCtgt < 2:179403/145‑1 (MQ=255) ctctTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGt < 7:42138/149‑1 (MQ=255) tctTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGG‑CTTCCAAGACTGTGCAGtt < 4:225337/149‑1 (MQ=255) ttGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGtt < 6:9023/147‑1 (MQ=255) gcgcTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGG‑CTTCCAAGACTGTGCAGTTGGACtg‑t < 3:148878/148‑1 (MQ=255) cTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGa < 1:331789/149‑1 (MQ=255) ttCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCgg < 8:79957/145‑1 (MQ=255) gTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCgg > 7:79957/1‑146 (MQ=255) gTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGG‑CTTCCAAGACTGTGCAGTTGGACTG‑Tgg > 6:151162/1‑140 (MQ=255) gTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGG‑CTTCCAAGACTGTGCAGTTGGACTG‑Tgg < 5:151162/140‑1 (MQ=255) tCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑Tgg > 1:301023/1‑139 (MQ=255) tCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGt > 3:139121/1‑149 (MQ=255) aTTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACtg‑tg < 7:236699/136‑1 (MQ=255) aTTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CGTGGAAGCCTGTGCAGTTGGACTG‑TGGGTGGGGGCGTGc > 4:226098/1‑149 (MQ=255) ttttAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGcc > 1:52403/1‑149 (MQ=255) aTGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCgaaggggccggagcaggcgacatcagttaccgggcagatagggccagtcatcacccaccagaaacacc > 6:195563‑M1/1‑81 (MQ=255) aTGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCgaaggggccggagcaggcgacatcagttaccgggcagatagggccagtcatcacccaccagaaacac < 3:66783‑M1/148‑68 (MQ=255) tGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGc < 3:289685/138‑1 (MQ=255) tGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGc > 4:289685/1‑138 (MQ=255) aCCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGc > 1:85126/1‑149 (MQ=255) ccGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCTCCGGCGTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGcc < 6:275543/149‑1 (MQ=255) ccGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCgaaggggccggagcaggcgacatcagttaccgggcagatagggccagtcatcacccaccagaaacacccgttct < 5:195563‑M1/148‑75 (MQ=255) ccGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGcc > 7:244466/1‑149 (MQ=255) gAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑Tgggg > 6:71460/1‑122 (MQ=255) gAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGa > 6:76617/1‑123 (MQ=255) gAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCg > 3:172630/1‑147 (MQ=255) aaaCAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCATTGCCCGCTCCCACACTCCAACAGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCg > 1:107984/1‑147 (MQ=37) aCAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGCAGCGGGCGTGCCCGCGAAGGGGCCGGAGCa < 1:29892/149‑1 (MQ=255) aGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGc < 7:235897/124‑1 (MQ=255) aGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGc > 8:235897/1‑124 (MQ=255) tCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGa > 8:173904/1‑149 (MQ=255) cTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGa < 2:52403/148‑1 (MQ=255) cTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGG‑CTTCCAAGACTGTGCa > 4:201320/1‑100 (MQ=21) tttGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACa > 6:102938/1‑149 (MQ=255) tttGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CGTGGAAGCCTGTGCAGTGGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGTGCAGGGGACa > 3:214034/1‑149 (MQ=255) ttGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCGGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGG‑CTTCCAAGACTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGc < 2:74405/122‑1 (MQ=17) g‑cCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCg > 3:220559/1‑132 (MQ=255) tCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGc > 6:197902/1‑108 (MQ=255) tCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCgg < 5:102938/149‑1 (MQ=255) ggtaaaaaTGTGCTGCCCGCCCCGGGCCTCTGCGCTGGCC‑CGCCCGCTCCCACAGGCCAACTGCCCAGT‑CTTGGAAGCCTGTGCAGTTGGACGG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCa < 7:156160/146‑1 (MQ=255) tgAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCggg < 4:139121/146‑1 (MQ=255) tgAAAAAGGGCTGGCCACCCCCCGGCCTCTTCGCTGGCA‑CGCCCGCACCCACCCCCCAACTGCACTGT‑CTTGCAAGCCTGTCCAGTTGGACTG‑TGGGTGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGc < 4:172630/147‑1 (MQ=255) tcaaaaaTGTGTTGCCAGCCACCGGCCTCTTCGCTCGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTCCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGc < 1:347253/145‑1 (MQ=255) gAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGTAAAGGGAAGGCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGGCGGAGCAGGAGGCATCA‑GTTACCggg > 1:293371/1‑146 (MQ=25) aaaaaTGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCgaaggggccggagcaggcgacatcagttaccgggcagatagggccagtcatca < 2:20125‑M1/97‑54 (MQ=255) aaaaaTGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCgaaggggccggagcaggcgacatcagttaccgggcagatagggccagtcatca > 1:20125‑M1/1‑44 (MQ=255) aaaaaTGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCCCTCCCCCAGTCCAAAAGCACAGT‑CATGGGAGCCGGTGGAGTTGGACTG‑TGGGCGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGCCATCC‑GTTAACGGGCaca > 2:345906/1‑146 (MQ=255) aaaTGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAg < 3:141845/149‑1 (MQ=255) tgtgTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTCCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAGGGc < 3:35444/149‑1 (MQ=255) gtgtTGCCAGCCACCGGCCTCTTCGCGGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGG‑Cttcc < 7:201142/65‑3 (MQ=14) gtgtTGCCAGCCACCGGCCTCTTCGCGGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGG‑Cttcc > 8:201142/1‑63 (MQ=14) tgtTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAGGGCCa < 7:173904/149‑1 (MQ=255) ttGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAGGGCCAGt < 5:84802/149‑1 (MQ=255) gcttgccaCAGTCCTCTTTGCGGGCA‑GGCCCGCTCCGTCTGTCCACTTGCTCAGT‑CTTGGAAGGCTGTGGAGTTGGAGTG‑TGGGAGGGGGGGTGGCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCTGATAGGGCCAGtc < 4:82274/144‑1 (MQ=255) gccagccaCCGGCCTCTTCGCTGGCA‑CGCCCCCACCCACACTACAAAAGCACAGG‑ATTTGAAGCCAGGGGAGGTGGACTGTTGGGGGGGGGGTTCCCCGCCAAGGGG‑CGGCGCAGGCGACAGAAGGTAACCGGGCGGA‑AGGGCCAGtg > 2:137805/1‑147 (MQ=255) cagccaCCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAGGGCCAGtcatc > 3:289922/1‑149 (MQ=255) agccaCCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CGTGGAAGCCTGTGCAGTTGGACGG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACCTCA‑GGTACCGGGCAGATAGGGCCAGtcagca > 3:275715/1‑149 (MQ=25) gccaCCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGCGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAGGGCCAGTCATcac > 1:77456/1‑149 (MQ=255) gccaCCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGc < 5:169182/113‑1 (MQ=255) cGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAggg > 3:217817/1‑96 (MQ=255) tctTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGAt > 8:197498/1‑124 (MQ=255) ttCGCGGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGG‑CTTCCAAGACTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAaca > 2:193740/1‑149 (MQ=21) cGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAac < 1:345906/146‑1 (MQ=255) cGCTGGCA‑CGCCCGATCCCCCAGTCCAACTGCACAGT‑CTTGGACGCCTGTCCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAacac < 4:20037/148‑1 (MQ=255) | GGGGGATGAAACCATGATTGGTCCTCGTCATCAGGTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCG‑CCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCA‑CGCCCGCTCCCACAGTCCAACTGCACAGT‑CTTGGAAGCCTGTGCAGTTGGACTG‑TGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCA‑GTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACAC > NC_002947/2282594‑2282881 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |