| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,351,992 | G→A | 5.1% | R425C (CGC→TGC) | PP_2067 ← | EmrB/QacA family drug resistance transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,351,992 | 0 | G | A | 5.1% | 431.2 / 6.6 | 137 | R425C (CGC→TGC) | PP_2067 | EmrB/QacA family drug resistance transporter |
| Reads supporting (aligned to +/- strand): ref base G (68/62); new base A (3/4); total (71/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.77e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
TAAGCCTCTCGTCGAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCACCGATAACGCAACCATGAT > NC_002947/2351847‑2352136 | aGCCTCTCGTCGAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCAc < 8:149933/149‑1 (MQ=255) aGCCTCTCGTCGAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAACGCTTTCACAGTGAGCGCATTCAc < 2:234699/149‑1 (MQ=255) ccTCTCGTCGAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACgg < 6:187594/149‑1 (MQ=255) ccTCTCGTCGAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAACGCTTTCACAGTGAGCGCATTCACga < 5:169676/149‑2 (MQ=255) tctcGTCGAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGt > 2:26015/1‑149 (MQ=255) ctcGTCGAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTc > 3:352218/1‑149 (MQ=255) gtcgAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGc > 2:75866/1‑148 (MQ=255) tcgAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGcca > 3:176931/1‑149 (MQ=255) tcgAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAACGCTTTCACAGTGAGCGCATTCACgag < 3:105438/143‑3 (MQ=255) tcgAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAACGCTTTCACAGTGAGCGCATTCACgag > 4:105438/1‑141 (MQ=255) aaTGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGccacca < 4:352218/149‑1 (MQ=255) tCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGt > 6:79543/1‑128 (MQ=255) tCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGc > 5:33421/1‑149 (MQ=255) tCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGc > 2:48183/1‑149 (MQ=255) tCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGc < 1:26015/149‑1 (MQ=255) ccTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGt > 6:278362/1‑148 (MQ=255) tCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCaa > 3:156082/1‑149 (MQ=255) ccAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGt > 5:287984/1‑145 (MQ=255) ccAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGt < 6:287984/145‑1 (MQ=255) cAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAAcc > 5:107108/1‑149 (MQ=255) cAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAAcc > 5:306643/1‑149 (MQ=255) cAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAAcc > 8:77565/1‑149 (MQ=255) cAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAAc < 7:216821/148‑1 (MQ=255) aaCGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAAccc > 4:118977/1‑149 (MQ=255) cTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGcc < 8:239335/149‑1 (MQ=255) ttCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCg > 1:272486/1‑149 (MQ=255) ccAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGtt > 1:152865/1‑114 (MQ=255) ccAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGtt < 2:152865/114‑1 (MQ=255) ccAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTa > 8:222969/1‑149 (MQ=255) cAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCg > 2:214443/1‑142 (MQ=255) cAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCg < 1:214443/142‑1 (MQ=255) cAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTa < 5:53076/148‑1 (MQ=255) cAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTAc < 5:124667/149‑1 (MQ=255) cAGCATTTGCTGCTGAGGCGGCAGCCAGCTCTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTa < 8:188356/148‑1 (MQ=255) gCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTAcc > 4:14254/1‑148 (MQ=255) tttGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATg < 7:222969/149‑1 (MQ=255) tgctgcTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGTTgg < 6:33421/148‑1 (MQ=255) tgctgAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGgcgc > 4:359968/1‑148 (MQ=255) aGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGAGACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCAcc > 1:280973/1‑148 (MQ=255) gcggcAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAgg > 5:213666/1‑149 (MQ=255) gcggcAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAgg < 7:317013/149‑1 (MQ=255) ggcAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGtt < 4:156515/149‑1 (MQ=255) cagccagcTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGc < 3:295841/112‑1 (MQ=255) cagcTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCACCCCGGCAGTACCGATGGCGCCACCCAGGTTGCGTaa > 8:115357/1‑149 (MQ=255) tttGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCg > 5:219381/1‑113 (MQ=255) gCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCga < 1:75866/148‑1 (MQ=255) gCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCga < 2:280973/148‑1 (MQ=255) gCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCga < 2:272486/148‑1 (MQ=255) gCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCga < 3:118977/148‑1 (MQ=255) aCCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGaa < 6:107108/149‑1 (MQ=255) tCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACAcc < 3:224965/149‑1 (MQ=255) tGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAAACAGGCAGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAacaactc > 1:95222/1‑145 (MQ=255) gTTGATACGCGCCTGCAGGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGTTGGCGCCACCCAGGTTGCGCAACATCGAGAACAccgccg < 5:8492/149‑1 (MQ=255) aCGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCACCATCGAGCACACCGCCGCGGCTg > 8:246890/1‑149 (MQ=255) cgcgCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCt > 7:294536/1‑147 (MQ=255) gcgcCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCa < 1:71244/123‑1 (MQ=255) gcgcCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCa > 2:71244/1‑123 (MQ=255) cTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCgg > 1:167292/1‑149 (MQ=255) gCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGtt < 4:69083/75‑1 (MQ=255) gCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGtt > 3:69083/1‑75 (MQ=255) gCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGtt < 1:119909/112‑1 (MQ=255) gCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGtt > 2:119909/1‑112 (MQ=255) cACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCtt > 1:219324/1‑149 (MQ=255) cACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCtt > 3:341778/1‑149 (MQ=255) gCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCAACAGTTGCGTCAACCAGGCCGTACCGATGGCGCCCCCCAGGTTGCGCAACATCGAGAACACCGCCGATGCTGAGCCGGCTTCAc > 5:85017/1‑149 (MQ=255) ttGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGc > 7:45930/1‑149 (MQ=255) ctGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGc < 6:114041/148‑1 (MQ=255) ggCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCtt > 6:150268/1‑149 (MQ=255) gCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCtt < 4:176931/148‑1 (MQ=255) gCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCtt < 8:333261/148‑1 (MQ=255) gCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTg < 2:219324/149‑1 (MQ=255) gCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTg < 7:434/149‑1 (MQ=255) cTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGt > 2:309448/1‑149 (MQ=255) tCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTc < 7:85169/149‑1 (MQ=255) gA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCa > 6:36670/1‑149 (MQ=255) a‑aCAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTc > 6:48759/1‑146 (MQ=255) a‑aCAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCa < 5:48759/148‑1 (MQ=255) aCCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCAc > 3:104567/1‑149 (MQ=255) cTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGc < 5:146509/130‑1 (MQ=255) cTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCa < 8:294536/149‑1 (MQ=255) tCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGt < 6:197990/50‑1 (MQ=255) tCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAg > 4:18366/1‑149 (MQ=255) ccGTGAACGCTTTCACAGTGAGCGCATTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAg > 6:360927/2‑149 (MQ=255) cGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAg > 7:342727/1‑148 (MQ=255) gTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAg < 1:309448/147‑1 (MQ=255) gTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCa < 4:85938/149‑1 (MQ=255) tGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCAc < 3:13647/149‑1 (MQ=255) tGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCAc < 6:113098/149‑1 (MQ=255) tGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGc < 3:227019/119‑1 (MQ=255) gcgcTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCTCCACCCAGGTTGCGCAACATCGAGAACACCCCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCCCCGAt > 7:235414/1‑148 (MQ=255) gcTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCACCGATAAc < 4:156082/149‑1 (MQ=255) tCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTc > 3:81630/1‑110 (MQ=255) tCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTc < 4:81630/110‑1 (MQ=255) tCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCACCGATAACg > 3:9736/1‑148 (MQ=255) tCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCACCGATAACg > 2:251024/1‑148 (MQ=255) aCTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCACCGATAACGCaa < 8:45930/149‑1 (MQ=255) tgAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCACCGATAACGCAAcc < 8:250894/147‑1 (MQ=255) tgAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCACCGATAACGCAACCat < 8:342727/149‑1 (MQ=255) aaaGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCACCGATAACGCAACCatga < 6:306643/149‑1 (MQ=255) aaGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCACCGATAACGCAACCatga < 5:301138/148‑1 (MQ=255) | TAAGCCTCTCGTCGAATGGTCGCCTCCAACGCTTCCAGCATTTGCTGCTGAGGCGGCAGCCAGCTTTGCACCGTCTGGTTGATACGCGCCTGCACGCTTGGCTCGA‑ACAGCGTCACCTGCTCGTGAATGCGCTCACTGTGAAAGCGTTCACGGGTCGCCACCAGTTGCGTCAACCCGGCCGTACCGATGGCGCCACCCAGGTTGCGCAACATCGAGAACACCGCCGAGGCTGAGCCGGCTTCACGCTTGTCCAGCCCGGCCACCGCCAGCACCGATAACGCAACCATGAT > NC_002947/2351847‑2352136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |