| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,368,284 | A→C | 6.9% | K368Q (AAG→CAG) | gdhB → | NAD‑specific glutamate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,368,284 | 0 | A | C | 6.9% | 453.3 / 19.6 | 145 | K368Q (AAG→CAG) | gdhB | NAD‑specific glutamate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (60/75); new base C (5/5); total (65/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.47e-01 | |||||||||||
Only 100 of 147 total aligned reads displayed.
ACGGCAAGGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATGGCCG > NC_002947/2368138‑2368432 | cGGCAAGGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAgg < 1:87818/149‑1 (MQ=255) gCAAGGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGaa > 3:114627/1‑149 (MQ=255) cAAGGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAAc > 7:88704/1‑149 (MQ=255) cAAGGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACATCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAAc > 3:192918/1‑149 (MQ=255) ggTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTgg > 7:227948/1‑149 (MQ=255) atcaAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGccc < 1:95571/148‑1 (MQ=255) atcaAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCa < 2:181734/149‑1 (MQ=255) aaGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt > 2:339239/1‑149 (MQ=255) aaGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt > 2:337083/1‑149 (MQ=255) aGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTg > 1:240409/1‑149 (MQ=255) aGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTg < 1:327962/149‑1 (MQ=255) ggAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGc > 5:91048/1‑149 (MQ=255) ggAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGc > 2:175877/1‑149 (MQ=255) gaccACCGGTTCATTGGGCTTTAAACCTTGTCGGGTTATTGCGAAATCGTTCATGCCATTTCGTAAATCCCCGGTTCCCCTGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCCAGTTCCTTGCCCAGGt < 1:111714/146‑1 (MQ=255) gAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCt < 8:227948/149‑1 (MQ=255) aGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTg < 4:114627/149‑1 (MQ=255) gCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTg > 2:98069/1‑148 (MQ=255) cGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAAc < 1:193255/130‑1 (MQ=255) cGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGt > 7:167166/1‑149 (MQ=255) gCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGtg > 4:133645/1‑149 (MQ=255) aTGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGcc > 8:344715/1‑149 (MQ=255) aTGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCAAGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGcc > 8:305464/1‑149 (MQ=255) ggggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGc > 8:25843/1‑126 (MQ=255) ggggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc > 7:180163/1‑149 (MQ=255) gggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc < 4:263785/148‑1 (MQ=255) gggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc < 3:62630/148‑1 (MQ=255) gggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCAGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTACGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgcg > 8:82950/1‑149 (MQ=255) ggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAgg > 2:259115/1‑117 (MQ=255) ggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAgg < 1:259115/117‑1 (MQ=255) ggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt > 7:177218/1‑130 (MQ=255) ggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt < 8:177218/130‑1 (MQ=255) cTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGcga < 5:266616/149‑1 (MQ=255) gTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCCAGTTCCTTGCCCAg > 6:25701/1‑124 (MQ=255) tACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGcgacga < 1:153905/149‑1 (MQ=255) tACACCTCGTCGGTGTATGGCGAAAGCGTGCAAGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGcgac < 7:305464/147‑1 (MQ=255) cacCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCgacgac < 8:88704/148‑1 (MQ=255) acCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCt > 8:250747/1‑149 (MQ=255) cTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGtgctgc > 3:289779/1‑134 (MQ=255) cTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGtgctgc < 4:289779/134‑1 (MQ=255) tcgtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGtt > 4:300827/1‑149 (MQ=255) ctatctgtgtATGTCGAAATCGTGCATGCTATTCAGTACATCCGCG‑‑T‑GAAGGTGGCAGAAGTTGAGCGCCGTTCGGGCTTTGATCCCAAGGCGCAGCTTGTAAAGGAACTGGACCAGGTGCTGGAAGTGATGCCGCTCGACGACCTGtt < 4:318255/143‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGtt < 2:56666/147‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGtt < 3:334081/147‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTc < 2:22806/148‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTc > 5:328126/1‑148 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTc < 4:192918/148‑1 (MQ=255) gtgtATGGCGAAAGCGTGCATGCCATTCAGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGAc > 1:20257/1‑149 (MQ=255) ggCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGccag > 7:114597/1‑146 (MQ=255) ggCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGc < 8:114597/145‑1 (MQ=255) gCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGAt < 3:133645/148‑1 (MQ=255) tGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCgacgac > 3:251612/1‑122 (MQ=255) cATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGtt < 3:226449/149‑1 (MQ=255) cATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAACGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGt < 6:23085/148‑1 (MQ=255) tGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCa < 8:167166/149‑1 (MQ=255) gCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATcgac < 5:293984/138‑1 (MQ=255) ccATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc > 6:95294/1‑108 (MQ=255) ccATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc < 5:95294/108‑1 (MQ=255) cATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCa > 5:48383/1‑149 (MQ=255) ccGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCActg < 2:64249/148‑3 (MQ=255) cATCCGCG‑‑T‑GAAGGTGGCGGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTTCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATgg < 7:93225/149‑1 (MQ=255) cATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg < 1:337083/148‑1 (MQ=255) cATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg < 6:328126/148‑1 (MQ=255) aTCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGtt < 6:91834/134‑1 (MQ=255) aaGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGc < 7:72753/148‑1 (MQ=255) aaGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGc < 7:344715/148‑1 (MQ=255) ggTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTg > 4:63450/1‑145 (MQ=255) gTGGCCGAAGTCGAGCGTGGTTCGGGCTTTGATCCCAAGGCCCACGTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCAAGGTCATGGCAATCGTGCAGa < 6:48383/148‑1 (MQ=255) gTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg < 5:230251/135‑1 (MQ=255) gTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg > 6:230251/1‑135 (MQ=255) gTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGAt < 4:344383/149‑1 (MQ=255) ggCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCaa > 2:129397/1‑137 (MQ=255) gCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATcc < 3:63450/148‑1 (MQ=255) gCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCa < 7:346600/149‑1 (MQ=255) ccGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCAc < 7:283210/124‑1 (MQ=255) ccGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAg < 3:300827/149‑1 (MQ=255) cGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAg > 5:35883/1‑148 (MQ=255) tCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCa > 3:342022/1‑117 (MQ=255) tCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCa < 4:342022/117‑1 (MQ=255) aGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGcaac < 4:159220/149‑1 (MQ=255) gggCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATgg > 3:14012/1‑113 (MQ=255) ggCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCgt < 8:180163/149‑1 (MQ=255) tttGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCTGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGtt > 2:314040/1‑149 (MQ=255) aTCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCt < 5:230557/148‑1 (MQ=255) aTCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTg < 6:35883/149‑1 (MQ=255) ccAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCg > 3:227473/1‑148 (MQ=255) cAAGGCCCACCTGGGCAAGGACCTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCTACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGAACCAAGATCCGCGTGTTCCTGCGt > 2:28534/1‑148 (MQ=255) ttccagcACCTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTa > 6:281859/7‑148 (MQ=255) aaGGCCCACCTGGGCAAGGAACAGGCCCAGGTGCTCGAAGTGCTGCCGCGCGCCGACCTGTTCCAGACCCCGATCTACGAGCTGTTCAGCACGGTCATGGCAATCGTGGATATCCAGGAGCGCACCAAGATCCGCGTGTTCCTGCGTa > 2:307452/1‑148 (MQ=255) aGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTaaa < 1:339239/149‑1 (MQ=255) ccagcACCTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATgg > 2:171026/5‑98 (MQ=37) ccagcACCTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATgg < 1:171026/94‑1 (MQ=37) cccACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGCCGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGAc > 3:243145/1‑149 (MQ=255) ccACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGAcc > 6:71847/1‑149 (MQ=255) cACCTGGTCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGAAGATCCAGGAGCGCANCAATATCCGCGTGTTCCTGCGTAAAGAccc < 1:28534/149‑1 (MQ=255) aCCTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCg > 4:81472/1‑149 (MQ=255) ccTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCg > 7:252892/1‑148 (MQ=255) ggCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATgg < 2:20257/149‑1 (MQ=255) ggCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATgg > 2:146537/1‑149 (MQ=255) ggCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATg < 4:227473/148‑1 (MQ=255) aaGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATGGCCg > 8:247360/1‑149 (MQ=255) | ACGGCAAGGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCGACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATGGCCG > NC_002947/2368138‑2368432 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |