| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,368,288 | A→T | 8.1% | E369V (GAA→GTA) ‡ | gdhB → | NAD‑specific glutamate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,368,288 | 0 | A | T | 8.1% | 411.8 / 15.8 | 140 | E369V (GAA→GTA) ‡ | gdhB | NAD‑specific glutamate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (60/68); new base T (5/7); total (65/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 141 total aligned reads displayed.
GCAAGGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATGGCCG > NC_002947/2368141‑2368432 | gCAAGGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGaa > 3:114627/1‑149 (MQ=255) cAAGGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAAc > 7:88704/1‑149 (MQ=255) ggTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTgg > 7:227948/1‑149 (MQ=255) atcaAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGccc < 1:95571/148‑1 (MQ=255) atcaAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGcc > 2:335357/1‑147 (MQ=255) atcaAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCa < 2:181734/149‑1 (MQ=255) tcaAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCCAGTTCCTTGCCCAg < 5:133605/149‑1 (MQ=255) aaGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt > 2:339239/1‑149 (MQ=255) aaGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt > 2:337083/1‑149 (MQ=255) aGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCCAGTTCCTTGCCCAGGTg < 7:197526/149‑1 (MQ=255) aGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTg > 1:240409/1‑149 (MQ=255) ggAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGc > 5:91048/1‑149 (MQ=255) ggAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGc > 3:263785/1‑149 (MQ=255) ggAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGc > 2:175877/1‑149 (MQ=255) gaccACCGGTTCATTGGGCTTTAAACCTTGTCGGGTTATTGCGAAATCGTTCATGCCATTTCGTAAATCCCCGGTTCCCCTGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCCAGTTCCTTGCCCAGGt < 1:111714/146‑1 (MQ=255) gAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCt < 8:227948/149‑1 (MQ=255) aGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTg < 4:114627/149‑1 (MQ=255) gCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTg > 2:98069/1‑148 (MQ=255) cGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAAc < 1:193255/130‑1 (MQ=255) cGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAAc > 2:193255/1‑130 (MQ=255) cGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGaa > 7:110754/1‑147 (MQ=255) cGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGt > 7:167166/1‑149 (MQ=255) gCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGtg > 4:133645/1‑149 (MQ=255) cATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGtgctg < 4:288249/148‑1 (MQ=255) aTGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGcc > 8:344715/1‑149 (MQ=255) aTGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCAAGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGcc > 8:305464/1‑149 (MQ=255) ggggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGc < 7:25843/126‑1 (MQ=255) ggggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGc > 8:25843/1‑126 (MQ=255) ggggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc > 3:159220/1‑149 (MQ=255) gggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc < 3:62630/148‑1 (MQ=255) gggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc < 4:263785/148‑1 (MQ=255) gggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCAGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTACGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgcg > 8:82950/1‑149 (MQ=255) ggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt > 7:177218/1‑130 (MQ=255) ggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgcgc < 1:335357/149‑1 (MQ=255) cTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGcg‑a < 5:266616/149‑1 (MQ=255) gTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCCAGTTCCTTGCCCAg < 5:25701/124‑1 (MQ=255) gTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCCAGTTCCTTGCCCAg > 6:25701/1‑124 (MQ=255) tACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGcg‑acga < 1:153905/149‑1 (MQ=255) cacCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCg‑acgac < 8:88704/148‑1 (MQ=255) acCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCt > 8:250747/1‑149 (MQ=255) acCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCt > 4:334081/1‑149 (MQ=255) cTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGtgctgc > 3:289779/1‑134 (MQ=255) tcgtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGtt > 4:300827/1‑149 (MQ=255) ctatctgtgtATGTCGAAATCGTGCATGCTATTCAGTACATCCGCG‑‑T‑GAAGGTGGCAGAAGTTGAGCGCCGTTCGGGCTTTGATCCCAAGGCGCAGCTTGTAAAGGAACTGGACCAGGTGCTGGAAGTGATGCCGCTCG‑ACGACCTGtt < 4:318255/143‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGtt < 3:334081/147‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGtt < 5:322200/147‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGtt < 2:56666/147‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTc > 5:328126/1‑148 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTc < 4:192918/148‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTc < 2:22806/148‑1 (MQ=255) ggTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGa < 2:240409/149‑1 (MQ=255) gtgtATGGCGAAAGCGTGCATGCCATTCAGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGAc > 1:20257/1‑149 (MQ=255) tgtATGGCGAAACCGTGCATGCCATTCAGTACATCCGCG‑‑T‑GAAGGTGGCCCAAGACGAGCGCCGTTCGGGCTTTGATCCCAACGACCACCTCGGCAAGGAACTGGCCCAGGTGATGGAATTGCTGCAGCGCG‑ACGACCTCTTcaga > 3:318255/1‑143 (MQ=255) ggCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGc < 8:114597/145‑1 (MQ=255) aaGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCCTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATcgac > 1:79047/1‑148 (MQ=255) gTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCt < 6:90498/149‑1 (MQ=255) gTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCt > 8:175433/1‑149 (MQ=255) cATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGtt < 3:226449/149‑1 (MQ=255) cATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAACGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGt < 6:23085/148‑1 (MQ=255) aTGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTc < 3:115052/149‑1 (MQ=255) tGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCa < 8:167166/149‑1 (MQ=255) ccATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc < 5:95294/108‑1 (MQ=255) ccATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc > 6:95294/1‑108 (MQ=255) cATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAg < 4:357918/88‑1 (MQ=255) cATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCa > 5:48383/1‑149 (MQ=255) ttCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACg < 7:175433/149‑1 (MQ=255) ccGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCActg < 2:64249/148‑3 (MQ=255) cGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTGCAGCCCGGt > 8:250559/1‑148 (MQ=255) cATCCGCG‑‑T‑GAAGGTGGCGGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTTCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATgg < 7:93225/149‑1 (MQ=255) cATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg < 1:337083/148‑1 (MQ=255) cATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg < 6:328126/148‑1 (MQ=255) aaGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGc < 7:72753/148‑1 (MQ=255) aaGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGc < 7:344715/148‑1 (MQ=255) aGGGGGCCGAAGTCGTTCGCCGTTCGGGCTTTGAACCCAATGCCCAACTTGGCAATGTAATGGCCCATGTGGTGGAAGTGCTGGCGGGCGTTCGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCa < 1:98069/149‑1 (MQ=255) gTGGCCGAAGTCGAGCGTGGTTCGGGCTTTGATCCCAAGGCCCACGTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCAAGGTCATGGCAATCGTGCAGa < 6:48383/148‑1 (MQ=255) gTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg < 5:230251/135‑1 (MQ=255) gTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg > 6:230251/1‑135 (MQ=255) gTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGAt < 4:344383/149‑1 (MQ=255) gCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATcc < 3:63450/148‑1 (MQ=255) gCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCa < 7:346600/149‑1 (MQ=255) ccGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCAc < 7:283210/124‑1 (MQ=255) cGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAg > 5:43974/1‑148 (MQ=255) tCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCa > 3:342022/1‑117 (MQ=255) aGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGcaac < 4:159220/149‑1 (MQ=255) gggCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATgg > 3:14012/1‑113 (MQ=255) ggCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCgt < 8:180163/149‑1 (MQ=255) gCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATcgacga < 2:156682/91‑1 (MQ=255) agccgaaGGCCCACCTGGTCAAGGTACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCTCAACAAGATCCGCGTGTTCCt < 2:307128/143‑1 (MQ=255) aTCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTg < 6:35883/149‑1 (MQ=255) ccAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCg > 3:227473/1‑148 (MQ=255) ttccagcACCTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTa > 6:281859/7‑148 (MQ=255) aaGGCCCACCTGGGCAAGGAACAGGCCCAGGTGCTCGAAGTGCTGCCGCGCG‑CCGACCTGTTCCAGACCCCGATCTACGAGCTGTTCAGCACGGTCATGGCAATCGTGGATATCCAGGAGCGCACCAAGATCCGCGTGTTCCTGCGTa > 2:307452/1‑148 (MQ=255) ccagcACCTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATgg < 1:171026/94‑1 (MQ=37) cccACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGCCGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGAc > 3:243145/1‑149 (MQ=255) ccACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGAcc > 4:221859/1‑149 (MQ=255) ccACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGAcc > 6:71847/1‑149 (MQ=255) cACCTGGTCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGAAGATCCAGGAGCGCANCAATATCCGCGTGTTCCTGCGTAAAGAccc < 1:28534/149‑1 (MQ=255) aCCTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCg > 4:81472/1‑149 (MQ=255) ggCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATgg > 2:146537/1‑149 (MQ=255) aaGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGAG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATGGCCg > 1:277204/1‑149 (MQ=255) | GCAAGGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATGGCCG > NC_002947/2368141‑2368432 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |