| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,368,292 | G→T | 7.4% | L370L (CTG→CTT) | gdhB → | NAD‑specific glutamate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,368,292 | 0 | G | T | 7.4% | 435.1 / 18.2 | 136 | L370L (CTG→CTT) | gdhB | NAD‑specific glutamate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (56/70); new base T (5/5); total (61/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-02 | |||||||||||
Only 100 of 137 total aligned reads displayed.
GGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATGGCCGCTTCTG > NC_002947/2368145‑2368438 | ggTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTgg > 7:227948/1‑149 (MQ=255) atcaAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGccc < 1:95571/148‑1 (MQ=255) atcaAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGcc > 2:335357/1‑147 (MQ=255) aaGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt > 2:337083/1‑149 (MQ=255) aaGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt > 2:339239/1‑149 (MQ=255) aGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCCAGTTCCTTGCCCAGGTg < 7:197526/149‑1 (MQ=255) aGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTg > 1:240409/1‑149 (MQ=255) aGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTg < 1:327962/149‑1 (MQ=255) ggAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGc > 3:263785/1‑149 (MQ=255) ggAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGc > 2:175877/1‑149 (MQ=255) gaccACCGGTTCATTGGGCTTTAAACCTTGTCGGGTTATTGCGAAATCGTTCATGCCATTTCGTAAATCCCCGGTTCCCCTGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCCAGTTCCTTGCCCAGGt < 1:111714/146‑1 (MQ=255) aGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTg < 4:114627/149‑1 (MQ=255) cGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGaa < 8:110754/147‑1 (MQ=255) cGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGaa > 7:110754/1‑147 (MQ=255) cGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGt > 7:167166/1‑149 (MQ=255) gCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGtg > 4:133645/1‑149 (MQ=255) cATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGtgctg < 4:288249/148‑1 (MQ=255) aTGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGcc > 8:344715/1‑149 (MQ=255) aTGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCAAGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGcc > 8:305464/1‑149 (MQ=255) ggggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc > 3:159220/1‑149 (MQ=255) gggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc < 4:263785/148‑1 (MQ=255) gggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc < 3:62630/148‑1 (MQ=255) gggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCAGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTACGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgcg > 8:82950/1‑149 (MQ=255) ggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt > 7:177218/1‑130 (MQ=255) ggCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGt < 8:177218/130‑1 (MQ=255) cTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGcg‑a < 5:266616/149‑1 (MQ=255) gTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCCAGTTCCTTGCCCAg > 6:25701/1‑124 (MQ=255) tACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGcg‑acga > 3:344383/1‑149 (MQ=255) tACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGcg‑acga < 1:153905/149‑1 (MQ=255) tACACCTCGTCGGTGTATGGCGAAAGCGTGCAAGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGcg‑ac < 7:305464/147‑1 (MQ=255) cacCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCg‑acgac < 8:88704/148‑1 (MQ=255) acCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCt < 1:209531/149‑1 (MQ=255) acCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCt > 4:334081/1‑149 (MQ=255) acCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCt > 8:250747/1‑149 (MQ=255) cTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGtgctgc < 4:289779/134‑1 (MQ=255) cTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGtgctgc > 3:289779/1‑134 (MQ=255) ctatctgtgtATGTCGAAATCGTGCATGCTATTCAGTACATCCGCG‑‑T‑GAAGGTGGCAGAAGTTGAGCGCCGTTCGGGCTTTGATCCCAAGGCGCAGCTTGTAAAGGAACTGGACCAGGTGCTGGAAGTGATGCCGCTCG‑ACGACCTGtt < 4:318255/143‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGtt < 5:322200/147‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGtt < 2:56666/147‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGtt < 3:334081/147‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTc < 2:22806/148‑1 (MQ=255) gtcgGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTc < 4:192918/148‑1 (MQ=255) gtgtATGGCGAAAGCGTGCATGCCATTCAGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGAc > 1:20257/1‑149 (MQ=255) tgtATGGCGAAACCGTGCATGCCATTCAGTACATCCGCG‑‑T‑GAAGGTGGCCCAAGACGAGCGCCGTTCGGGCTTTGATCCCAACGACCACCTCGGCAAGGAACTGGCCCAGGTGATGGAATTGCTGCAGCGCG‑ACGACCTCTTcaga > 3:318255/1‑143 (MQ=255) ggCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGc < 8:114597/145‑1 (MQ=255) gCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGAt < 3:133645/148‑1 (MQ=255) tGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCg‑acgac > 3:251612/1‑122 (MQ=255) cATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGtt < 3:226449/149‑1 (MQ=255) cATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAACGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGt < 6:23085/148‑1 (MQ=255) aTGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTc < 3:115052/149‑1 (MQ=255) tGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCa < 8:167166/149‑1 (MQ=255) gCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATcgac > 6:293984/1‑138 (MQ=255) gCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATcgac < 5:293984/138‑1 (MQ=255) ccATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc > 6:95294/1‑108 (MQ=255) ccATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCcgc < 5:95294/108‑1 (MQ=255) cATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAg < 4:357918/88‑1 (MQ=255) cATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCa > 5:48383/1‑149 (MQ=255) ttCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACg < 7:175433/149‑1 (MQ=255) ttCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCCTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACg < 2:79047/149‑1 (MQ=255) ccGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCActg < 2:64249/148‑3 (MQ=255) cGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTGCAGCCCGGt > 8:250559/1‑148 (MQ=255) cATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg < 7:82950/148‑1 (MQ=255) cATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg < 1:337083/148‑1 (MQ=255) cATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg < 6:328126/148‑1 (MQ=255) aTCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGtt < 6:91834/134‑1 (MQ=255) aTCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGtt > 5:91834/1‑134 (MQ=255) aaGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGc < 7:72753/148‑1 (MQ=255) aGGGGGCCGAAGTCGTTCGCCGTTCGGGCTTTGAACCCAATGCCCAACTTGGCAATGTAATGGCCCATGTGGTGGAAGTGCTGGCGGGCGTTCGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCa < 1:98069/149‑1 (MQ=255) ggTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTg > 4:63450/1‑145 (MQ=255) gTGGCCGAAGTCGAGCGTGGTTCGGGCTTTGATCCCAAGGCCCACGTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCAAGGTCATGGCAATCGTGCAGa < 6:48383/148‑1 (MQ=255) gTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATg < 5:230251/135‑1 (MQ=255) ggCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCaa > 2:129397/1‑137 (MQ=255) gCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATcc < 3:63450/148‑1 (MQ=255) gCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCa < 7:346600/149‑1 (MQ=255) ccGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCAc < 7:283210/124‑1 (MQ=255) ccGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCAc > 8:283210/1‑124 (MQ=255) cGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAg > 5:35883/1‑148 (MQ=255) cGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAg > 5:43974/1‑148 (MQ=255) cGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAg > 6:230557/1‑148 (MQ=255) tCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCa < 4:342022/117‑1 (MQ=255) gggCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATgg < 4:14012/113‑1 (MQ=255) ggCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCgt < 8:180163/149‑1 (MQ=255) gCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATcgacga < 2:156682/91‑1 (MQ=255) agccgaaGGCCCACCTGGTCAAGGTACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCTCAACAAGATCCGCGTGTTCCt < 2:307128/143‑1 (MQ=255) aTCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCt < 5:230557/148‑1 (MQ=255) aTCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTg < 6:35883/149‑1 (MQ=255) ccAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCg > 3:227473/1‑148 (MQ=255) cAAGGCCCACCTGGGCAAGGACCTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCTACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGAACCAAGATCCGCGTGTTCCTGCGt > 2:28534/1‑148 (MQ=255) aaGGCCCACCTGGGCAAGGAACAGGCCCAGGTGCTCGAAGTGCTGCCGCGCG‑CCGACCTGTTCCAGACCCCGATCTACGAGCTGTTCAGCACGGTCATGGCAATCGTGGATATCCAGGAGCGCACCAAGATCCGCGTGTTCCTGCGTa > 2:307452/1‑148 (MQ=255) aGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTaaa < 1:339239/149‑1 (MQ=255) ccagcACCTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATgg > 2:171026/5‑98 (MQ=37) ccagcACCTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATgg < 1:171026/94‑1 (MQ=37) ccACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGAcc > 6:71847/1‑149 (MQ=255) ccACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGAcc > 4:221859/1‑149 (MQ=255) cACCTGGTCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGAAGATCCAGGAGCGCANCAATATCCGCGTGTTCCTGCGTAAAGAccc < 1:28534/149‑1 (MQ=255) aCCTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCg > 4:81472/1‑149 (MQ=255) ccTGGGCCAGTTCCTTGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCg > 7:252892/1‑148 (MQ=255) ggCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATgg < 2:20257/149‑1 (MQ=255) aaGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATGGCCg > 8:247360/1‑149 (MQ=255) cTGGCCCAGGTGCTGGAAGTGCTGCTGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATGGCCGCTTCTg < 1:314040/149‑1 (MQ=255) | GGTCATCAAGGAGCACCGCTTCATGGGGCTGTACACCTCGTCGGTGTATGGCGAAAGCGTGCATGCCATTCCGTACATCCGCG‑‑T‑GAAGGTGGCCGAAGTCGAGCGCCGTTCGGGCTTTGATCCCAAGGCCCACCTGGGCAAGGAACTGGCCCAGGTGCTGGAAGTGCTGCCGCGCG‑ACGACCTGTTCCAGACGCCGATCGACGAGCTGTTCAGCACGGTCATGGCAATCGTGCAGATCCAGGAGCGCAACAAGATCCGCGTGTTCCTGCGTAAAGACCCGTATGGCCGCTTCTG > NC_002947/2368145‑2368438 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |