| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,395,583 | G→C | 5.8% | intergenic (‑191/+52) | dacB ← / ← PP_2099 | D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,395,583 | 0 | G | C | 5.8% | 446.8 / 13.4 | 137 | intergenic (‑191/+52) | dacB/PP_2099 | D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (67/62); new base C (3/5); total (70/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.87e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.98e-01 | |||||||||||
Only 100 of 137 total aligned reads displayed.
GTGAATACCCTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAGGC > NC_002947/2395440‑2395730 | gAATACCCTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATggg < 4:141308/148‑1 (MQ=255) aaTACCCTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATgggg < 1:41223/148‑1 (MQ=255) ccTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCt > 2:169758/1‑149 (MQ=255) ccTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCt > 1:226784/1‑149 (MQ=255) ggcgAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCa < 2:226784/149‑1 (MQ=255) aGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCaa > 4:295415/1‑149 (MQ=255) ggAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTg > 7:297101/1‑134 (MQ=255) ggAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTg < 8:297101/134‑1 (MQ=255) ggAAAAGGGCTTTGGGGCTGGAAGAGATGATGGCCCCACGACCTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATc < 4:287269/149‑1 (MQ=255) aaaaGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCCATTCGGGTGGCCtttttattg > 1:315739/1‑139 (MQ=255) aaaaGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCCATTCGGGTGGCCtttttattg < 2:315739/144‑6 (MQ=255) aaaaGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCATCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCaa > 2:18525/1‑149 (MQ=255) aaGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAAcc > 7:296998/1‑149 (MQ=255) aaGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAAc < 2:155019/148‑1 (MQ=255) aaGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAAc > 1:155019/1‑148 (MQ=255) gCTTTGGGGCTTTAAGACTTTATGGCCCCACGACGTAAACAGTACGCTTTATGCCCAAATCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAATCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCttt < 7:224659/148‑1 (MQ=255) gCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCttt > 7:128662/1‑148 (MQ=255) tttGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGTATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAg > 6:250948/1‑149 (MQ=255) tttGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAAccagatc > 3:11469/1‑143 (MQ=255) tttGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAAc < 4:11469/142‑1 (MQ=255) tttGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAg > 3:291729/1‑149 (MQ=255) ggggCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGccc > 4:260509/1‑149 (MQ=255) gggCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGccc > 6:185209/1‑148 (MQ=255) gggCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGccc > 6:38443/1‑148 (MQ=255) ggCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCg > 6:214027/1‑148 (MQ=255) cTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAg < 5:185209/149‑1 (MQ=255) tGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGc > 4:28430/1‑149 (MQ=255) tAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCt > 6:65754/1‑148 (MQ=255) tAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCt > 7:284891/1‑148 (MQ=255) aaGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGa > 4:188664/1‑149 (MQ=255) gagaTGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCt < 5:62254/131‑1 (MQ=255) agaTGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACaa < 3:28430/149‑1 (MQ=255) gatgatGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACaa < 8:284891/148‑1 (MQ=255) atgatgGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGt < 7:62364/149‑1 (MQ=255) tgatgGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGt < 8:159628/148‑1 (MQ=255) tgatgGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTa < 3:295415/149‑1 (MQ=255) atgGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTAt > 2:174818/1‑148 (MQ=255) tgGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCa < 4:344313/149‑1 (MQ=255) ggCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCAc > 1:170862/1‑149 (MQ=255) ccACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGAc > 2:8307/1‑136 (MQ=255) ccACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGAc < 1:8307/136‑1 (MQ=255) gTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCttgtt > 4:254376/1‑149 (MQ=255) tAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGAAAC‑GTTCGACGGAAAAGCATAGACAATAAAAAGCCCACCCGAATCGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCATAAGCTGACAAGTATCACTCTGCCttgtt > 7:115206/1‑148 (MQ=255) aaCAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGa > 5:221509/1‑148 (MQ=255) aCAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATa < 1:110573/149‑1 (MQ=255) cAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAGGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCATCCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAg < 5:106658/149‑1 (MQ=255) cAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAg > 7:280517/1‑149 (MQ=255) gTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGCAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAgga > 8:105446/1‑148 (MQ=255) aCGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCtt > 3:120626/1‑149 (MQ=255) cGCATTATGCCCCAAGCGCAGCCGCGATGAGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGCCCGTTTCAGCAATCCACCTTTCAGACCGAAGCTGACAACTAACACTCAGCCTTGTTGATAGCCttt > 2:280400/1‑149 (MQ=255) gCATTATGCCCCAAGCGCAGCCGCGATGCGTCACGGTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCttt > 1:231429/1‑149 (MQ=255) aTGCCCCAAGCGCAGCCGCGATGCTTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCgg < 3:188664/148‑1 (MQ=255) aTGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGTATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCgg < 5:250948/148‑1 (MQ=255) aTGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCgg < 2:231429/148‑1 (MQ=255) cccAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTAc > 7:198311/1‑148 (MQ=255) cccAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAAAGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTAGATGATAGGCTTTTCCGGGTAc > 4:243194/1‑148 (MQ=255) cAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAg < 3:254376/149‑1 (MQ=255) cAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAg < 8:198311/149‑1 (MQ=255) cAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAg < 7:258605/149‑1 (MQ=255) gcgcAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCa < 1:174818/149‑1 (MQ=255) gcAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATc < 3:260509/149‑1 (MQ=255) cAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATc > 4:350342/1‑148 (MQ=255) cAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATc > 1:82437/1‑148 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATa < 2:32182/124‑1 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCtt < 5:195/129‑1 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCtt > 6:195/1‑129 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAg > 8:266051/1‑142 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAg < 7:266051/142‑1 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATc > 6:163781/1‑147 (MQ=255) cgATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCagcagc < 5:65754/149‑1 (MQ=255) cgATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCagcagc < 1:181933/149‑1 (MQ=255) gATGCGTCAC‑GTTCGACGGAAAACAATCGCAAATAAAAAGGCCCCCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGATGCTTCCAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCCTCCAGCAGCg < 1:280400/149‑1 (MQ=255) cGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCt < 4:120626/149‑1 (MQ=255) gTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCACCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCt > 5:276001/1‑148 (MQ=255) tCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTg > 6:29537/1‑148 (MQ=255) cAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGAc > 6:52642/1‑149 (MQ=255) gTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTc > 8:337015/1‑149 (MQ=255) gTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTc < 5:29537/149‑1 (MQ=255) cGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGa < 7:337015/148‑1 (MQ=255) aCGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCttgt > 8:294273/1‑98 (MQ=255) aaaGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGt > 3:264405/1‑148 (MQ=255) aaGCATCGCCAATTAAAAGGCCACCCGAATGGGGTTGGGTTTTCAGCAATCAACCTTTCAGCCCGTAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACGAGGCTTCCAGCAGCGGGCTGACTTCGTTCTTGGTCa < 8:115206/149‑1 (MQ=255) gCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGt > 3:142234/1‑149 (MQ=255) cATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGtt < 4:142234/149‑1 (MQ=255) ccAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTg > 6:139844/1‑149 (MQ=255) cAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGc < 5:163781/149‑1 (MQ=255) aTAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCgg > 2:119362/1‑149 (MQ=255) tgaaaaGGCCACCCCATTCGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCt < 6:111557/129‑1 (MQ=255) tgaaaaGGCCACCCCATTCGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCt > 5:111557/3‑131 (MQ=255) tAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGc > 5:10638/1‑149 (MQ=255) gaaaaGGCCACCCCATTCGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTg < 4:57395/131‑1 (MQ=255) ggCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGa < 5:251937/149‑1 (MQ=255) ccACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGTAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGc < 1:119362/149‑1 (MQ=255) ccACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGc < 5:139844/149‑1 (MQ=255) aCCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGc > 5:305541/1‑147 (MQ=255) aCCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCa < 6:221509/149‑1 (MQ=255) ccGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAgg > 7:286508/1‑149 (MQ=255) ccGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAgg > 7:194436/1‑149 (MQ=255) ccGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAgg > 1:308449/1‑149 (MQ=255) cGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAGGc < 2:308449/149‑1 (MQ=255) | GTGAATACCCTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAAGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAGGC > NC_002947/2395440‑2395730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |