| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,395,587 | G→C | 6.5% | intergenic (‑195/+48) | dacB ← / ← PP_2099 | D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,395,587 | 0 | G | C | 6.5% | 429.4 / 14.1 | 135 | intergenic (‑195/+48) | dacB/PP_2099 | D‑alanyl‑D‑alanine carboxypeptidase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (65/61); new base C (4/5); total (69/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.63e-01 | |||||||||||
Only 100 of 141 total aligned reads displayed.
GTGAATACCCTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAGGCTTCAA > NC_002947/2395440‑2395735 | gTGAATACCCTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATgg > 2:110573/1‑149 (MQ=255)gTGAATACCCTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGACCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATgg > 7:159628/1‑149 (MQ=255) gAATACCCTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATggg < 4:141308/148‑1 (MQ=255) aaTACCCTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATgggg < 1:41223/148‑1 (MQ=255) cccTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACTCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGcc < 8:106125/149‑1 (MQ=255) ccTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCt > 1:226784/1‑149 (MQ=255) ccTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCt > 2:169758/1‑149 (MQ=255) ggcgAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCa < 2:226784/149‑1 (MQ=255) ggcgAGGGAAAACGGCTTTGGGGCGGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCAATATGCCCCAAGCCCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCa < 7:275661/149‑1 (MQ=255) gcgAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCCATTCGGGTGGCCtttttat < 4:37283/149‑4 (MQ=255) aGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCaa > 4:295415/1‑149 (MQ=255) aGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCCATTCGGGTGGCCtttttattgg < 2:185527/149‑7 (MQ=39) ggAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTg > 7:297101/1‑134 (MQ=255) ggAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTg < 8:297101/134‑1 (MQ=255) ggAAAAGGGCTTTGGGGCTGGAAGAGATGATGGCCCCACGACCTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATc < 4:287269/149‑1 (MQ=255) aaaaGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCCATTCGGGTGGCCtttttattg < 2:315739/144‑6 (MQ=255) aaGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAAc > 1:155019/1‑148 (MQ=255) gCTTTGGGGCTTTAAGACTTTATGGCCCCACGACGTAAACAGTACGCTTTATGCCCAAATCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑TCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCttt < 7:224659/148‑1 (MQ=255) tttGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GTATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAg > 6:250948/1‑149 (MQ=255) tttGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAAccagatc > 3:11469/1‑143 (MQ=255) tttGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAAc < 4:11469/142‑1 (MQ=255) tttGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAg > 3:291729/1‑149 (MQ=255) ggggCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGccc > 4:260509/1‑149 (MQ=255) gggCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGccc > 6:38443/1‑148 (MQ=255) ggCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCg > 6:214027/1‑148 (MQ=255) cTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAg < 5:185209/149‑1 (MQ=255) tAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCt < 5:38443/148‑1 (MQ=255) tAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCt > 6:65754/1‑148 (MQ=255) tAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGCGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCt > 5:258338/1‑148 (MQ=255) agaTGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACaa < 3:28430/149‑1 (MQ=255) gatgatGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACaa < 8:284891/148‑1 (MQ=255) tgatgGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGt < 8:159628/148‑1 (MQ=255) tgatgGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTa < 3:295415/149‑1 (MQ=255) atgGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTAt > 2:174818/1‑148 (MQ=255) ggCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCAc > 1:170862/1‑149 (MQ=255) cccACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACt > 3:19304/1‑147 (MQ=255) gacgTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCtt < 4:19304/149‑1 (MQ=255) tAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGAAAC‑GTTCGACGGAAAA‑GCATAGACAATAAAAAGCCCACCCGAATCGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCATAAGCTGACAAGTATCACTCTGCCttgtt > 7:115206/1‑148 (MQ=255) aaaCAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGa > 6:164320/1‑149 (MQ=255) aaCAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGa > 5:221509/1‑148 (MQ=255) aCAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATa < 1:110573/149‑1 (MQ=255) cAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAg > 7:280517/1‑149 (MQ=255) gTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGCAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAgga > 8:105446/1‑148 (MQ=255) aCGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCtt > 3:120626/1‑149 (MQ=255) cGCATTATGCCCCAAGCGCAGCCGCGATGAGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGCCCGTTTCAGCAATCCACCTTTCAGACCGAAGCTGACAACTAACACTCAGCCTTGTTGATAGCCttt > 2:280400/1‑149 (MQ=255) gCATTATGCCCCAAGCGCAGCCGCGATGCGTCACGGTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCttt > 1:231429/1‑149 (MQ=255) aTGCCCCAAGCGCAGCCGCGATGCTTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCgg < 3:188664/148‑1 (MQ=255) cccAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTAcc < 5:164320/149‑1 (MQ=255) cccAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTAc > 6:251937/1‑148 (MQ=255) cccAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAAAGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTAGATGATAGGCTTTTCCGGGTAc > 4:243194/1‑148 (MQ=255) cAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAg < 8:198311/149‑1 (MQ=255) gcgcAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCa < 1:174818/149‑1 (MQ=255) gcAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATc < 3:260509/149‑1 (MQ=255) cAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATc > 4:350342/1‑148 (MQ=255) cAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATc > 1:82437/1‑148 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAAGGCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCGTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCCCTCAGCGTTGTTGATa > 1:32182/1‑125 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATa < 2:32182/124‑1 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCtt > 6:195/1‑129 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAg < 7:266051/142‑1 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATc > 6:163781/1‑147 (MQ=255) aGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCca < 4:291729/149‑1 (MQ=255) gCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATc > 5:107902/1‑146 (MQ=255) gCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATc < 6:107902/146‑1 (MQ=255) cgATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCagcagc < 5:65754/149‑1 (MQ=255) tCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGa < 1:18525/149‑1 (MQ=255) cAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGAc > 6:52642/1‑149 (MQ=255) gTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTc > 8:337015/1‑149 (MQ=255) gTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTc < 5:29537/149‑1 (MQ=255) ttCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCg < 2:170862/149‑1 (MQ=255) ttCGACGGAAAA‑GCATAGGGAATAAAAAGGCCACCCGAATGGGGTGGACTTTTCAGCATACAAGCTTTCAGGACGAAGCTGACAAGTATGACTCTGCGTTGATGATAGGCTTTTCCGGGTACCAGGCATGCAGCATCGGGCTGACTTCg < 4:271749/149‑1 (MQ=255) cGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGa < 7:337015/148‑1 (MQ=255) aCGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCttgt < 7:294273/98‑1 (MQ=255) aCGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCttgt > 8:294273/1‑98 (MQ=255) ggAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCt < 2:295651/136‑1 (MQ=255) ggAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTg < 5:214027/149‑1 (MQ=255) ggAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGATGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCt > 1:295651/1‑136 (MQ=255) aaa‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGt > 3:264405/1‑148 (MQ=255) aa‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGa > 7:37610/1‑140 (MQ=255) gCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGt > 3:142234/1‑149 (MQ=255) cATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGtt < 4:142234/149‑1 (MQ=255) ccAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTg > 6:139844/1‑149 (MQ=255) cAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGc < 5:163781/149‑1 (MQ=255) aTAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCgg > 2:119362/1‑149 (MQ=255) tgaaaaGGCCACCCCATTCGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCt > 5:111557/3‑131 (MQ=255) tAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGc > 5:10638/1‑149 (MQ=255) gaaaaGGCCACCCCATTCGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTg < 4:57395/131‑1 (MQ=255) aaaaGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCt < 4:124591/149‑1 (MQ=255) aaGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCttt > 8:250269/1‑149 (MQ=255) aaGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCttt < 2:82437/149‑1 (MQ=255) ggCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGa < 5:251937/149‑1 (MQ=255) ccACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGTAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGc < 1:119362/149‑1 (MQ=255) cACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGc > 7:255310/1‑148 (MQ=255) aCCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGc > 5:305541/1‑147 (MQ=255) aCCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCa < 6:221509/149‑1 (MQ=255) ccGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAgg > 7:286508/1‑149 (MQ=255) ccGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAgg > 7:194436/1‑149 (MQ=255) ccGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAgg > 1:308449/1‑149 (MQ=255) aaTGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCtt < 3:47239/137‑1 (MQ=255) tGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAGGCTTc > 4:54330/1‑148 (MQ=255) ggggTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATGTTGGTCAGTTCGCTGCGGCCTTTGAGCCAGGCTTCaa > 6:9916/1‑149 (MQ=255) | GTGAATACCCTGCGGCGAGGGAAAAGGGCTTTGGGGCTGTAAGAGATGATGGCCCCACGACGTAAACAGTACGCATTATGCCCCAAGCGCAGCCGCGATGCGTCAC‑GTTCGACGGAAAA‑GCATCGCCAATAAAAAGGCCACCCGAATGGGGTGGCCTTTTCAGCAATCAACCTTTCAGCCCGAAGCTGACAAGTATCACTCAGCCTTGTTGATAGGCTTTTCCGGGTACCAGGCATCCAGCAGCGGGCTGACTTCGATCTTGGTCAGTTCGCTGCGGCCTTTGAGCCAGGCTTCAA > NC_002947/2395440‑2395735 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |