| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,401,206 | C→A | 5.7% | W228L (TGG→TTG) ‡ | dgt ← | deoxyguanosinetriphosphate triphosphohydrolase‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,401,206 | 0 | C | A | 5.7% | 442.7 / 12.4 | 140 | W228L (TGG→TTG) ‡ | dgt | deoxyguanosinetriphosphate triphosphohydrolase‑like protein |
| Reads supporting (aligned to +/- strand): ref base C (69/63); new base A (4/4); total (73/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.29e-02 | |||||||||||
Only 100 of 142 total aligned reads displayed.
GCAGGTCTTCGCCGACCAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGGCGCTCCACGGGTACTTGAGGTAGGTGC > NC_002947/2401060‑2401353 | tCTTCGCCGACCAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTg > 4:202427/1‑149 (MQ=255) ttCGCCGACCAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGgt > 3:204076/1‑149 (MQ=255) ttCGCCGACCAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGgt > 1:82142/1‑149 (MQ=255) gCCGACCAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGCTGGGCGCGCCACCCGCTGgtgt < 1:337562/148‑1 (MQ=255) ccGACCAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTc < 2:162892/149‑1 (MQ=255) aCCAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAg > 7:29667/1‑149 (MQ=255) ccAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACACGCAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAg < 1:231385/149‑1 (MQ=255) ccAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGc > 6:241018/1‑149 (MQ=255) cAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAg > 2:222315/1‑147 (MQ=255) cAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAg < 1:222315/147‑1 (MQ=255) ggTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGc > 7:303134/1‑149 (MQ=255) cGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCgg > 7:51000/1‑148 (MQ=255) gAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCa < 3:185410/149‑1 (MQ=255) aGCGCCTCGACTTCTGCGTATTGCAGCAGCTGCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAg < 8:303134/149‑1 (MQ=255) gcCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCtt > 4:234692/1‑149 (MQ=255) cTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGGGGCAGGCCGAGCTTGc > 7:256991/1‑149 (MQ=255) cTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGc < 4:96574/149‑1 (MQ=255) cTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGc > 2:162338/1‑149 (MQ=255) tCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCg > 6:406/1‑149 (MQ=255) gACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCggg > 8:119272/1‑149 (MQ=255) aCTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAg > 2:85480/1‑125 (MQ=255) aCTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAg < 1:85480/125‑1 (MQ=255) cTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCg < 5:151236/149‑1 (MQ=255) ttCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGa > 8:138323/1‑149 (MQ=255) cTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGgt < 8:211762/114‑1 (MQ=255) cTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGgt > 7:211762/1‑114 (MQ=255) cGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGt < 5:241018/149‑1 (MQ=255) gTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTACAGCTGCGGCAGGACGAGCTTGCGTGCGATCTGta > 8:230184/1‑148 (MQ=255) ttGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGa < 1:269577/149‑1 (MQ=255) ttGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGa < 6:176016/149‑1 (MQ=255) gcagcTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAgg > 3:298223/1‑149 (MQ=255) cTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGCTGGGCGCGCCACCCGCTGgtgt > 8:56578/1‑100 (MQ=37) cTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGCTGGGCGCGCCACCCGCTGgtgt < 7:56578/100‑1 (MQ=37) tCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAg > 6:162736/1‑149 (MQ=255) tCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAg > 7:22846/1‑149 (MQ=255) ccATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCgg < 6:94019/125‑1 (MQ=255) ccATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCgg > 5:94019/1‑125 (MQ=255) ccAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGct < 2:47956/148‑1 (MQ=255) cAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGTGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGctct > 3:322444/1‑149 (MQ=255) cAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGctct > 4:96381/1‑149 (MQ=255) cAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGctc < 7:281479/148‑1 (MQ=255) cAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGACATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGctc < 1:133926/148‑1 (MQ=255) ggCCGTCTTCCATGTCGATCAGCGCGTATCATATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGa < 8:51000/149‑1 (MQ=255) ccGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAgcgc < 8:313580/81‑1 (MQ=255) ccGTCTTACAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAgcgc > 7:313580/1‑81 (MQ=255) gTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAg < 7:308234/126‑1 (MQ=255) gTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGAt < 8:308047/146‑1 (MQ=255) gTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGc > 4:312875/1‑149 (MQ=255) tCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCt < 3:96381/149‑1 (MQ=255) ccAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGcc > 3:19395/1‑148 (MQ=255) aGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGAAGGGGCAGTTCGCTCTGATa > 8:2934/1‑140 (MQ=255) ggTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAAc < 8:221058/149‑1 (MQ=255) gTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCTCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAgg < 2:228169/121‑1 (MQ=255) cGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCCGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTtg > 7:234727/1‑149 (MQ=255) gATCAGCGCGTGGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTtg < 6:45548/148‑1 (MQ=255) aTCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACtt > 8:300993/1‑146 (MQ=255) aTCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACtt < 7:300993/146‑1 (MQ=255) aGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGctt < 2:82142/149‑1 (MQ=255) gcgcGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGcttc < 3:234692/149‑1 (MQ=255) cgTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGcc < 3:233457/82‑1 (MQ=255) cgTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGcc > 4:233457/1‑82 (MQ=255) tAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTa < 3:312875/149‑1 (MQ=255) tAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTa < 8:22846/149‑1 (MQ=255) tAGCAGATGTCATACAGAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTa < 1:123430/149‑1 (MQ=255) gCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGc < 4:298223/149‑1 (MQ=255) aGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAgggg < 4:153765/106‑1 (MQ=255) tCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGc > 3:109164/1‑149 (MQ=255) aTCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGt > 6:151686/1‑149 (MQ=255) aTCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAACGCTGGTGTTCCAGCTGCGGCAGCCCGAGCTTCCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGt > 5:256261/1‑149 (MQ=255) tCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTc < 1:210165/149‑1 (MQ=255) gCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGTGCGTCGGc > 8:280053/1‑149 (MQ=255) cAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGt < 1:334830/144‑1 (MQ=255) cAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGt > 2:334830/1‑144 (MQ=255) cTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTggc < 7:119272/149‑1 (MQ=255) cTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTggc > 4:263908/1‑149 (MQ=255) cTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTggc > 2:97421/1‑149 (MQ=255) cATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTggcggg < 5:151686/149‑1 (MQ=255) aTCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCTGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGct < 2:246574/95‑1 (MQ=255) aTCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCTGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGct > 1:246574/1‑95 (MQ=255) aTCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTggcgggc > 8:327945/1‑149 (MQ=255) tCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGcttc < 6:143933/119‑1 (MQ=255) aGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGgcgc < 5:406/148‑1 (MQ=255) aGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGGCGCt < 8:29667/149‑1 (MQ=255) ggaacac‑CAGCGCTGGGCGCGCCACCCGCTGGTCTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGCCGCTc > 5:198921/4‑149 (MQ=255) gATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAg < 5:214133/79‑1 (MQ=255) gATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAg > 6:214133/1‑79 (MQ=255) gaacac‑CAGCGCTGGGCGCGCCACCCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGGCGCTc > 7:210420/3‑148 (MQ=255) acac‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGAGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGGCGCTCCAc > 8:136162/1‑149 (MQ=255) ac‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGGCGCTCCACgg > 4:325653/1‑149 (MQ=255) ac‑CAGCGCTGGGCGCGCCACCCGCTGGTGTCCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGt < 7:273639/133‑1 (MQ=255) ac‑CAGCGCTGGGCGCGCCACCCGCTGGTGTCCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGt > 8:273639/1‑133 (MQ=255) aGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGTGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGGCGCTCCACGGGTa < 4:322444/149‑1 (MQ=255) gCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGctct > 1:161482/1‑84 (MQ=255) gCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGctct < 2:161482/84‑1 (MQ=255) ggTGGCGCGCCCAGCGCTGGTGTTCCAGCTGGGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGGCGCTCCACGGGTACTTg < 8:256991/149‑1 (MQ=255) ggTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTtgt > 6:67506/1‑99 (MQ=255) ggTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTtgt < 5:67506/99‑1 (MQ=255) gcgcCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCt < 5:195993/82‑1 (MQ=255) gcgcCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGGCGCTCCACGGGTACTTGaggtag > 3:247715/1‑149 (MQ=255) ccAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGGCGCTCCACGGGTACTTGAGGTAGGTGc > 5:100444/1‑149 (MQ=255) | GCAGGTCTTCGCCGACCAGGTCGAGCAACAGCGCCTCGACTTCTGCGTATTGCAGCAGCTCCATTTCCAGGCCGTCTTCCAGGTCGATCAGCGCGTAGCAGATGTCATCGGCAGCCTCCATCAGATACAC‑CAGCGGGTGGCGCGCCCAGCGCTGGTGTTCCAGCTGCGGCAGGCCGAGCTTGCGGGCGATCTGTTCGAGCAGGGGCAGTTCGCTCTGATAGCTGCCGAACTTGTGCTTCTTGTAGCCCAGGGCGTCGGCGTGGCGGGCGCTCCACGGGTACTTGAGGTAGGTGC > NC_002947/2401060‑2401353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |