| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,414,773 | T→G | 6.1% | intergenic (+315/‑30) | PP_2114 → / → PP_2115 | transposase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,414,773 | 0 | T | G | 6.1% | 170.2 / 3.3 | 66 | intergenic (+315/‑30) | PP_2114/PP_2115 | transposase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (24/37); new base G (2/2); total (27/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
CTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATC > NC_002947/2414625‑2414919 | cTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCAt > 3:174312/1‑149 (MQ=32) aCCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCg > 3:309247/1‑149 (MQ=32) ccAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTTCGGCCTTGCTCCCGGCAGGAGCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGc < 4:206991/149‑1 (MQ=17) aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAg < 3:321221/149‑1 (MQ=32) aaaaaCGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTAGCTCCCGGCAGGACCCCCCCGAAGGCCCCATCATGGGGCC‑AAAGCGCATGAAGGGCAACCATGCACCTCACCTGCCATCGCAAg > 4:221600/1‑149 (MQ=11) gCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGc < 3:287870/149‑1 (MQ=32) cTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCg < 5:323361/149‑1 (MQ=32) cgcTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTc > 3:273035/1‑149 (MQ=32) gcTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCg < 1:72473/149‑1 (MQ=32) ccATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGCAGGCCCCCTCCTGGGGCC‑TCAGCGCTTGACGGGCATCCCTGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcct > 1:201408/1‑149 (MQ=12) ccATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcct > 5:170060/1‑149 (MQ=32) ccATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTACGGCCATGCTACCGGCAGGACCGCGCCCAACGCCCCAACCAGGGGCC‑ACAGCGCTTGACGGGCAGACCTGCCCGTCACCAGCCATCGCACGGCCAGCGTTAGGcct > 4:85187/1‑149 (MQ=11) catcatCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcctc < 1:156851/149‑1 (MQ=32) ctcCCGCCCCTGCGCTGGGCTCCGGGGGCCCCTTCATCCGGCCTTGCTCCCGGGATGTCCGGGCCGTAGGCCCCATCCTGGGGCCTTCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGcctcct < 1:107313/147‑1 (MQ=11) atcCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTg < 4:309247/148‑1 (MQ=32) tcCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGaa < 8:38381/149‑1 (MQ=32) ggCCCGTGAGCTGCGCTCCGGGGTCCGCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TGAGGGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCTTTCGGCCTCCTGAAGTc < 8:214427/149‑1 (MQ=11) ggCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTc < 6:308849/149‑1 (MQ=32) ggCCCCTGCGCTGCGCGCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTc < 3:55927/149‑1 (MQ=17) cccTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTcgc > 7:66788/1‑148 (MQ=32) ccTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCGCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGa < 5:313392/149‑1 (MQ=17) cgctgcgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagat < 1:200677/149‑1 (MQ=32) cgctgcgctCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaag < 4:273035/147‑1 (MQ=32) gggTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagat < 4:81858/149‑1 (MQ=32) ccccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGGCACCTGCCTTCGCAAGGCCGGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatc > 1:162070/1‑146 (MQ=17) cccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaaga < 3:85187/149‑1 (MQ=32) cccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaag > 8:285235/1‑148 (MQ=32) cccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatc > 8:40309/1‑145 (MQ=32) ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatca > 3:318877/1‑145 (MQ=32) ccTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatca < 4:318877/145‑1 (MQ=32) cTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatc < 6:262860/149‑1 (MQ=32) aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGTGGCC‑TGAGCGCTTGACGGGCATCCATGCCCGTCACCTGACTTCGCTAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaa < 3:221600/148‑1 (MQ=255) aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaa < 8:250211/148‑1 (MQ=32) aCTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGATTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaa < 7:285235/148‑1 (MQ=17) cTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaaga < 7:4274/149‑1 (MQ=32) cTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatc > 7:136291/1‑145 (MQ=32) cGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatca < 5:227211/149‑1 (MQ=32) cGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatc > 8:195570/1‑148 (MQ=32) cGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatca < 4:228884/125‑1 (MQ=32) cGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatca > 3:228884/1‑125 (MQ=32) ggCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatc > 5:229484/1‑147 (MQ=32) gCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaag < 4:169938/149‑1 (MQ=32) ccTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaaga < 1:44266/149‑1 (MQ=32) cTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGCAGTCGCGaagatcaagatcaagatcaagatcaagat < 1:797/143‑1 (MQ=17) cTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGCAGTCCCGaagatcaagatcaagatcaagatcaagat > 2:797/1‑143 (MQ=17) cTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatc > 3:175387/1‑144 (MQ=32) cTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatc > 3:346097/1‑144 (MQ=32) gCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatc < 1:316172/147‑1 (MQ=32) tCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCGGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaag > 4:197540/1‑148 (MQ=17) ccGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaaga < 5:362509/147‑1 (MQ=32) agcgctgaGGCCCCAGGATGGGGCC‑TTAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc > 1:146689/8‑144 (MQ=11) cgcCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc < 7:195570/149‑1 (MQ=32) cgcCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc < 1:207593/149‑1 (MQ=32) cgcCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagat > 7:237333/1‑148 (MQ=32) gctgaGGCCCCAGGATGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatca > 4:262762/5‑148 (MQ=255) ccGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaa < 8:136291/149‑1 (MQ=32) tgaGGCCCCAGGATGGGGCC‑TTAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga < 2:146689/147‑1 (MQ=255) gAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga < 2:162070/149‑1 (MQ=33) aaGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga > 7:44117/1‑148 (MQ=33) aGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGTCATCCATCCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc < 5:113929/149‑1 (MQ=25) aGGCCCCAGGATGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaaga < 3:262762/147‑1 (MQ=16) gCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc > 1:245552/1‑147 (MQ=35) ccccATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc > 7:47045/1‑146 (MQ=35) cATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc < 4:175387/149‑1 (MQ=40) aTCCTGGGGCC‑TCAGCGCTTGACGGGCTTCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc < 6:253338/88‑1 (MQ=18) aTCCTGGGGCC‑TCAGCGCTTGACGGGCTTCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatc > 5:253338/1‑88 (MQ=18) aTCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatc > 2:259750/1‑148 (MQ=40) | CTTTTCGCCCTTACGGCGAGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGCGCTCCCATCATCCGGCCCCTGCGCTGCGCTCCGGGGTCCCCTCACTCCGGCCTTGCTCCCGGCAGGACCGCGCCGAAGGCCCCATCCTGGGGCC‑TCAGCGCTTGACGGGCATCCATGCCCGTCACCTGCCTTCGCAAGGCCTGCGTTCGGCCTCCTGAAGTCGCGAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATCAAGATC > NC_002947/2414625‑2414919 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |