| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,455,255 | T→A | 5.0% | intergenic (‑137/‑31) | mfd ← / → gapB | transcription‑repair coupling factor/glyceraldehyde‑3‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,455,255 | 0 | T | A | 5.0% | 332.6 / 4.6 | 110 | intergenic (‑137/‑31) | mfd/gapB | transcription‑repair coupling factor/glyceraldehyde‑3‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (51/53); new base A (3/3); total (54/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
ACTGACACGGGAGATTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCGCAATAACAAT > NC_002947/2455111‑2455402 | aCTGACACGGGAGATTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCAt < 1:306660/148‑1 (MQ=255) tGACACGGGAGATTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAAt > 8:118732/1‑149 (MQ=255) gACACGGGAGATTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATg > 6:72070/1‑149 (MQ=255) acacGGGAGATTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATg > 3:117005/1‑148 (MQ=255) gggAGATTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGcc > 6:369426/1‑149 (MQ=255) gggAGATTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGcc > 2:193663/1‑149 (MQ=255) ggAGATTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCAt < 6:143456/139‑1 (MQ=255) ggAGATTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCAt > 5:143456/1‑139 (MQ=255) aTTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCTACATTATGACGccccaac < 6:330761/149‑4 (MQ=255) ttGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCt‑ttt < 1:158581/149‑1 (MQ=255) ttGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCt‑ttt < 3:199091/149‑1 (MQ=255) cACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCt‑ttttt < 1:193663/148‑1 (MQ=255) cACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCt‑ttttt < 2:189318/148‑1 (MQ=255) aCTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑Ct > 4:314559/1‑149 (MQ=255) tCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGt > 3:320507/1‑149 (MQ=255) aaGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTccc > 1:8297/1‑149 (MQ=255) aaGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTccc < 8:229380/149‑1 (MQ=255) aGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTccc > 5:82511/1‑148 (MQ=255) gCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTgg > 2:248680/1‑148 (MQ=255) gCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTgg > 4:101938/1‑148 (MQ=255) aaaGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAGCACTGGCTTGCGTCAGTGCGACAGGCAGTCATTGCCGGTTCGGCGTTGGGGCGTCATAATGTAGCGCCT‑TTTTT‑CTGTCCGGACATGTGGacg > 8:20644/1‑147 (MQ=255) aaaGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAg < 6:82511/149‑1 (MQ=255) agaCCGATTGTACCGTTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACAGTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTc < 1:263841/149‑1 (MQ=255) agaCCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTcc < 3:273235/132‑1 (MQ=255) aCCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCTACATTATGACGccccaacg < 4:356790/122‑5 (MQ=255) aCCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCTACATTATGACGccccaacg > 3:356790/1‑118 (MQ=255) aCCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTccc < 1:308558/149‑1 (MQ=255) aCCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTccc > 2:193466/1‑149 (MQ=255) ccGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACAtgtg > 1:329353/1‑138 (MQ=255) ccGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACAtgtg < 2:329353/138‑1 (MQ=255) cGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCTACATTATGACGccccaa > 4:44514/1‑116 (MQ=255) cGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCTACATTATGACGccccaa < 3:44514/118‑3 (MQ=255) cGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGt > 6:342438/1‑102 (MQ=255) cGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGt < 7:339339/149‑1 (MQ=255) gATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGAGACAGGAACTCATTGCCGGTTCCGAGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGt > 7:267476/1‑148 (MQ=255) aTTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCGTACATGTTGAAGG‑TTCACGTg > 7:36456/1‑148 (MQ=255) ttGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGAc < 3:314559/149‑1 (MQ=255) tACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTc < 3:145691/148‑1 (MQ=255) ccGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCg > 4:69754/1‑140 (MQ=255) ccGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCg < 3:69754/140‑1 (MQ=255) ccGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAg < 5:369426/148‑1 (MQ=255) cGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAg > 7:117936/1‑147 (MQ=255) tGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGTGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGcc < 4:320507/149‑1 (MQ=255) tccGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCa < 8:271099/147‑1 (MQ=255) ccGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAgt < 2:340190/149‑1 (MQ=255) ccGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAg < 2:77624/148‑1 (MQ=255) cTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGGATTCCCGTGACTCAGAAGCCCGACCAGTGTc < 1:31497/149‑1 (MQ=255) cTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCt < 5:65739/149‑1 (MQ=255) tCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCTCTTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCt < 1:280990/147‑1 (MQ=255) tCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTgg < 4:117005/149‑1 (MQ=255) tCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTg < 7:28098/148‑1 (MQ=255) aGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGt < 5:72070/148‑1 (MQ=255) ggCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGa > 1:157701/1‑149 (MQ=255) gCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAg > 2:274705/1‑149 (MQ=255) cGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCCACATGTGGa < 1:193728/105‑1 (MQ=255) cGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCCACATGTGGa > 2:193728/1‑105 (MQ=255) gggCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGa > 5:114147/1‑149 (MQ=255) aTGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTg > 6:108198/1‑132 (MQ=255) aTGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTg < 5:108198/132‑1 (MQ=255) gAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGAt > 1:66295/1‑140 (MQ=255) gAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGAt < 2:66295/140‑1 (MQ=255) acacTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAg > 5:7806/1‑149 (MQ=255) cTTGCGGCACTGCGACAGGCACTCATTGCGGGTTCCGCGTTGGGGATTCATAATGTAGCCCCT‑TTTTT‑CTTTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTTGTGAGTGGATTGATCGTGAAGCCCTGGc < 2:8297/149‑1 (MQ=255) ttGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCt > 2:303570/1‑149 (MQ=255) gCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGt < 7:39546/92‑1 (MQ=255) gCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGt > 8:39546/1‑92 (MQ=255) gCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTg < 8:188809/148‑1 (MQ=255) gTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGccc < 8:158279/103‑1 (MQ=255) tGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTg > 8:335732/1‑129 (MQ=255) tGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTg < 7:335732/129‑1 (MQ=255) tGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCgat > 8:185429/1‑148 (MQ=255) cGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCgatgat < 6:7806/149‑1 (MQ=255) cAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATccc > 8:44079/1‑149 (MQ=255) cAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATccc > 5:127477/1‑149 (MQ=255) ggCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGc < 8:117936/149‑1 (MQ=255) gCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGAtt > 8:344481/1‑114 (MQ=255) gCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGAtt < 7:344481/114‑1 (MQ=255) gCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCt > 1:74768/1‑149 (MQ=255) cACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGc < 2:203853/136‑1 (MQ=255) cACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCt > 7:122883/1‑148 (MQ=255) cACTCATTGCCGGTTCCGAGTTGGGGCGACATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGc > 1:203853/1‑136 (MQ=255) aCTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATc > 1:237467/1‑142 (MQ=255) aTTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTTGGTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGATGAAGCGATGATCCCGCTTATCg > 1:256452/1‑149 (MQ=255) gCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGc < 3:203540/122‑1 (MQ=255) gCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGc > 4:203540/1‑122 (MQ=255) gTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGctc < 1:248680/149‑1 (MQ=255) ccGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTa < 7:185429/148‑1 (MQ=255) cgcgTTGGGGCTTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTAcc < 7:44079/149‑1 (MQ=255) cgcgTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTAc < 2:256452/148‑1 (MQ=255) gcgTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTATATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCg > 2:102793/1‑149 (MQ=255) gcgTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCg > 8:14101/1‑149 (MQ=255) gcgTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTACCTACATGTGGAAGG‑TTCCCGTGAATCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGACCTGGCTGAAGCTATGCTCACGCTTATCGGTCAGCTCTAcc > 2:135319/1‑148 (MQ=255) cgTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCg > 7:210850/1‑148 (MQ=255) gTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCGc > 4:141449/1‑148 (MQ=255) ggggCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCGCAAt < 3:141449/148‑1 (MQ=255) ggggCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCGCAAt < 8:40707/148‑1 (MQ=255) ggggCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCGCAAt < 1:303570/148‑1 (MQ=255) gggCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTTGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCAGCTTATCGGTCAGCTCTACCGAAATa > 4:107272/1‑148 (MQ=255) gTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCGCAATAACAAt < 8:122883/149‑1 (MQ=255) gTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCGCAATAACAAt < 6:127477/149‑1 (MQ=255) | ACTGACACGGGAGATTGCACTCCAAGCGTTGCGGCAAAGAGACCGATTGTACCGGTGACAGTGCCGGCTGTCAGGCTCGAAAGGGCATGAACACTGGCTTGCGTCACTGCGACAGGCACTCATTGCCGGTTCCGCGTTGGGGCGTCATAATGTAGCCCCT‑TTTTT‑CTGTCCCTACATGTGGAAGG‑TTCCCGTGACTCAGAAGCCCGACCAGTGTCTTGGTGAGTGGATTGATCGTGAAGCCCTGGCTGAAGCGATGATCCCGCTTATCGGTCAGCTCTACCGCAATAACAAT > NC_002947/2455111‑2455402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |