| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,584,611 | C→T | 7.1% | intergenic (+98/+29) | PP_2264 → / ← folD‑II | sugar ABC transporter substrate‑binding protein/bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,584,611 | 0 | C | T | 7.1% | 245.0 / 6.1 | 84 | intergenic (+98/+29) | PP_2264/folD‑II | sugar ABC transporter substrate‑binding protein/bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase |
| Reads supporting (aligned to +/- strand): ref base C (39/39); new base T (3/3); total (42/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.53e-01 | |||||||||||
GTCAGCTACAACGAACTGCTGAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCGGGGCAGGGCAGTCTC > NC_002947/2584466‑2584756 | gTCAGCTACAACGAACTGCTGAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCaaa < 6:340000/149‑1 (MQ=255) aaCGAACTGCTGAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGtt > 7:203186/1‑149 (MQ=255) aCGAACTGCTGAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGttt < 6:204498/149‑1 (MQ=255) gAACTGCTGAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGCCAAAAAAAACGTCACCTGCAAAGGTGCCGTTTTc > 3:251369/1‑149 (MQ=255) tgctgAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGc < 8:124782/147‑1 (MQ=255) tgctgAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGc > 7:124782/1‑147 (MQ=255) ctgAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTTTGCAGGTGCCGttttttttg < 3:337027/147‑6 (MQ=255) ctgAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCa > 3:74857/1‑149 (MQ=255) tgAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCa > 7:86213/1‑148 (MQ=255) tgAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCAc > 3:216189/1‑149 (MQ=255) gAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTTTGCAGGTGCCGtt > 1:134653/1‑138 (MQ=255) gAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTTTGCAGGTGCCGtt < 2:134653/138‑1 (MQ=255) aaGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCa < 8:86213/146‑1 (MQ=255) aaGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCAc < 2:202122/147‑1 (MQ=255) cTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTAt < 8:22678/149‑1 (MQ=255) ggAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTAc < 4:216189/149‑1 (MQ=255) gcggcCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTtg < 4:74857/148‑1 (MQ=255) cggcCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTtgtg < 5:51560/149‑1 (MQ=255) cggcCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTtgtg < 5:372/149‑1 (MQ=255) ggcCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACg < 4:241325/134‑1 (MQ=255) ggcCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACg > 3:241325/1‑134 (MQ=255) cAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGc > 6:137385/1‑149 (MQ=255) gTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCtcttct < 1:273944/149‑1 (MQ=255) tCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCg > 6:86785/1‑149 (MQ=255) ggCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGc < 6:43186/145‑1 (MQ=255) ggCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGc > 5:43186/1‑145 (MQ=255) aCGCCGGGGTGGTATCACCGACCGCGGGGGCCGTGCAACCGCTCGCGCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGc < 2:311020/149‑1 (MQ=255) gCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCg‑t < 8:203186/149‑1 (MQ=255) ggggTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGtt < 6:246849/149‑1 (MQ=255) gggTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCTCGCAGTATTACTTGTGCAGCTCTTCTGcc > 4:51800/1‑134 (MQ=255) gggTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCTCGCAGTATTACTTGTGCAGCTCTTCTGcc < 3:51800/134‑1 (MQ=255) gtTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAATAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCca < 2:32588/148‑1 (MQ=255) gtTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCca < 3:327350/148‑1 (MQ=255) tttCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCcagc > 3:330673/1‑149 (MQ=255) tttCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCcag > 4:321615/1‑148 (MQ=255) ttCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCcag > 5:248419/1‑147 (MQ=255) accgaccgCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAgg > 6:191326/1‑148 (MQ=255) accgaccgCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAgg > 1:212326/1‑148 (MQ=255) accgaccgCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAgg > 2:248089/1‑148 (MQ=255) accgaccgCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAgg > 7:225011/1‑148 (MQ=255) cgaccgCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCg < 7:101004/123‑1 (MQ=255) cgaccgCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCg > 8:101004/1‑123 (MQ=255) cgaccgCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCAc < 1:326367/149‑1 (MQ=255) cGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCg > 1:130052/1‑149 (MQ=255) gCAACTGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGcc > 5:143670/1‑149 (MQ=255) cAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGccc > 2:285399/1‑149 (MQ=255) aaCCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCg > 2:303311/1‑149 (MQ=255) aCCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAg < 2:190462/93‑1 (MQ=255) aCCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAg > 1:190462/1‑93 (MQ=255) cgctcgctCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGAcg > 8:198322/1‑149 (MQ=255) gctcgctcGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGAcgc < 3:321615/149‑1 (MQ=255) gAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCAc < 8:225011/149‑1 (MQ=255) gAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCAc < 5:191326/149‑1 (MQ=255) aGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATAGAGCG‑TGTTCTCCAGCAGGCACGCCCGGGt > 3:302773/1‑123 (MQ=255) aGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGt < 4:297682/123‑1 (MQ=255) aGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGt > 3:297682/1‑123 (MQ=255) aGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCg < 7:198322/149‑1 (MQ=255) aGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATAAAGCG‑TGTTCTCCAGCAGGCACGCCCGGGt < 4:302773/123‑1 (MQ=255) gCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGccc > 4:311277/1‑115 (MQ=255) cACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGa < 2:130052/149‑1 (MQ=255) tAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATc > 5:151963/1‑148 (MQ=255) tAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATc > 5:45053/1‑148 (MQ=255) gTCACGGGCAAAAAAAACTGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCa < 4:251369/148‑1 (MQ=255) gTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCGCCGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCa < 1:285399/149‑1 (MQ=255) gTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCcagca > 2:26543/1‑99 (MQ=255) gTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCcagca < 1:26543/99‑1 (MQ=255) tCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGc > 5:51603/1‑149 (MQ=255) aCGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGcc < 1:248089/148‑1 (MQ=255) aCGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCg > 4:333276/1‑149 (MQ=255) aCGGGCAAAAAAAACCGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCGCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATc < 4:259856/113‑1 (MQ=255) cAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGcgcg > 6:47943/1‑149 (MQ=255) tgcgaaaaCGGCACCTTTGCAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCgg > 5:163466/5‑149 (MQ=255) aaaaaaaaCGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCgg < 2:146568/149‑1 (MQ=255) aaaaaaaaCGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCgg > 1:146568/1‑149 (MQ=255) cgaaaaCGGCACCTTTGCAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCgggg < 6:163466/147‑1 (MQ=255) aaaaaaCGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCgggg > 6:14195/1‑149 (MQ=255) aaaaCGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCgggg > 1:164408/1‑147 (MQ=255) aaaCGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCGgggcag < 6:45053/149‑1 (MQ=255) aaCGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCGGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCGgggcagg < 4:330673/149‑1 (MQ=255) aCGGCACCTTTGCAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCGgggcaggg > 8:143208/1‑149 (MQ=255) aCGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGTACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCGgggcaggg > 1:260423/1‑149 (MQ=255) cTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCGGGGCAGGGCAGtctc < 5:86785/149‑1 (MQ=255) tGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCGgggcagg > 2:169015/1‑140 (MQ=255) tGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCGgggcagg < 1:169015/140‑1 (MQ=255) cAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGgcgc < 1:3218/130‑1 (MQ=255) cAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGgcgc > 2:3218/1‑130 (MQ=255) | GTCAGCTACAACGAACTGCTGAAGTCCTGGGAGGCGGCCAGGAAGTGATCGGCTGAACGCCGGGGTGGTTTCACCGACCGCGGGGGCCGTGCAACCGCTCGCTCGCGAAGTGGCCACTAGTCACGGGCAAAAAAAACGGCACCTGCAAAGGTGCCGTTTTCGCATCACGCAGTATTACTTGTGCAGCTCTTCTGCCGCATACAGCG‑TGTTCTCCAGCAGGCACGCCCGGGTCATCGGCCCGACGCCGCCCGGCACCGGTGTGATCCAGCCGGCGCGGGGCAGGGCAGTCTC > NC_002947/2584466‑2584756 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |