| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,630,161 | C→G | 5.2% | A373G (GCC→GGC) | clpX → | ATP‑dependent Clp protease ATP‑binding subunit ClpX |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,630,161 | 0 | C | G | 5.2% | 251.1 / 3.7 | 77 | A373G (GCC→GGC) | clpX | ATP‑dependent Clp protease ATP‑binding subunit ClpX |
| Reads supporting (aligned to +/- strand): ref base C (37/36); new base G (2/2); total (39/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
CCGGTACTGGCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGG > NC_002947/2630016‑2630305 | ccGGTACTGGCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGt > 6:323360/1‑149 (MQ=255) ggTACTGGCTACCCTTGACTAGCTGGATGAGGCCGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTg < 7:46488/149‑1 (MQ=255) ggTACTGGCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTg > 6:51828/1‑149 (MQ=255) gTACTGGCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGc < 2:291425/149‑1 (MQ=255) ggCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGc > 7:24241/1‑148 (MQ=255) gCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGc < 4:174798/143‑1 (MQ=255) gCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGc > 3:174798/1‑143 (MQ=255) tACCCTTGACGAGCTGGATGAGGCTGCGTTGATGCTAGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAg > 1:52705/1‑149 (MQ=255) tACCCTTGACGAGCTGGATGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGc > 7:171585/1‑145 (MQ=255) tACCCTTGACGAGCTGGATGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGc < 8:171585/145‑1 (MQ=255) tGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTg > 4:186961/1‑149 (MQ=255) gAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCCAGGGCCTTGCGTGCAACGGCCTTGAgc > 3:152924/1‑139 (MQ=38) gAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCCAGGGCCTTGCGTGCAACGGCCTTGAgc < 4:152924/139‑1 (MQ=38) aGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTgg < 3:186961/148‑1 (MQ=255) aGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGgc < 8:241956/149‑1 (MQ=255) gTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCTAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTg > 8:203631/1‑149 (MQ=255) tGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTg < 3:113109/147‑1 (MQ=255) gATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGc < 2:52705/148‑1 (MQ=255) gC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGc > 1:105639/1‑108 (MQ=255) gC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGc < 2:105639/108‑1 (MQ=255) tCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTc > 7:171593/1‑148 (MQ=255) ccTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCg > 8:122550/1‑148 (MQ=255) tCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATc > 3:266282/1‑149 (MQ=255) aCCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATc < 5:51828/147‑1 (MQ=255) gCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAg < 8:24241/149‑1 (MQ=255) ccGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAgg > 5:343585/1‑149 (MQ=255) cGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGc < 2:120331/149‑1 (MQ=255) gaagaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTg < 7:72308/103‑1 (MQ=255) gaagaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTg > 8:72308/1‑103 (MQ=255) gaagaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCg > 8:72738/1‑149 (MQ=255) aagaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGtt < 7:106245/133‑1 (MQ=255) aagaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGtt > 8:106245/1‑133 (MQ=255) gactGCGCTGACCAAGTAGTATGCCATGGTGTTCGAGATGTTAAGCGTCGAGCTCGAGTTCCGCAGCGTTGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGTTCCTCGAAGGCgtgt < 8:327704/146‑1 (MQ=255) gaaTGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCgtgt < 5:323360/149‑1 (MQ=255) gcTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCg < 1:223168/127‑1 (MQ=255) gcTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCg > 2:223168/1‑127 (MQ=255) aCCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGTAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATAc > 6:179516/1‑149 (MQ=255) aCCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATa < 7:203631/148‑1 (MQ=255) cAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCa > 6:49289/1‑149 (MQ=255) aGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGa < 2:31587/127‑1 (MQ=255) aGCAGTATGCCAAGCTGTTCGAGATGGAAAACGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGa > 1:31587/1‑127 (MQ=255) aGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTAt < 4:266282/149‑1 (MQ=255) gTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATg < 6:343585/149‑1 (MQ=255) ccAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGtt > 1:245155/1‑127 (MQ=255) ccAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGtt < 2:245155/127‑1 (MQ=255) cTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTc < 7:122550/149‑1 (MQ=255) ttCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGa > 8:231519/1‑148 (MQ=255) ttCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGa > 8:34921/1‑148 (MQ=255) cGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGaaa > 1:331043/1‑148 (MQ=255) gaTGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGc > 2:234678/1‑109 (MQ=255) gaTGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGc < 1:234678/109‑1 (MQ=255) ggAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCt < 1:267626/114‑1 (MQ=255) ggAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCt > 2:267626/1‑114 (MQ=255) aagccgcGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGTAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCa < 5:179516/143‑1 (MQ=255) aaGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGa < 5:252799/114‑1 (MQ=255) aaGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGa > 6:252799/1‑114 (MQ=255) gTCGACCTCGAGTTCCGCAGCGATGCGGCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGc > 1:4108/1‑148 (MQ=255) tCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATg > 2:125545/1‑120 (MQ=255) aCCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggtg < 7:72738/149‑1 (MQ=255) ccTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATAGCATGTATGAGATCCCTTCGAAAAAGGATGTCa > 5:312301/1‑140 (MQ=255) ccTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCa < 6:312301/140‑1 (MQ=255) tCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAggtggt > 7:67477/1‑148 (MQ=255) cGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTa > 7:133974/1‑149 (MQ=255) gAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTa < 2:331043/148‑1 (MQ=255) aGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATc < 2:4108/149‑1 (MQ=255) ccGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATcgac < 2:5548/148‑1 (MQ=255) ccGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATcgac > 1:5548/1‑148 (MQ=255) cagtcttGC‑GCTCCAGGGCCTTGCGTGCAACGGCCTTGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATcgacga > 2:157855/7‑147 (MQ=37) aTGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTc < 8:67477/149‑1 (MQ=255) cTCCAGGGCCTTGCGTGCAACGGCCTTGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGa < 2:68758/149‑1 (MQ=255) cTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGa < 5:49289/149‑1 (MQ=255) cTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGATAGATACCATGAATAAGATCCCTTCGAAAAAGTATGTCAGCAAGGTGGTTATCCACGATAGCGTCAta > 4:238105/1‑146 (MQ=255) tCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg > 3:206783/1‑149 (MQ=255) tCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg > 2:271627/1‑149 (MQ=255) cAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAgg > 7:318761/1‑149 (MQ=255) aaGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAggg < 7:34921/149‑1 (MQ=255) aaGGCAGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAg < 3:238105/147‑1 (MQ=255) | CCGGTACTGGCTACCCTTGACGAGCTGGATGAGGCTGCGTTGATGC‑AGATCCTCACCGAGCCGAAGAATGCGCTGACCAAGCAGTATGCCAAGCTGTTCGAGATGGAAAGCGTCGACCTCGAGTTCCGCAGCGATGC‑GCTCAAGGCCGTTGCACGCAAGGCCCTGGAGCGCAAGACTGGCGCTCGTGGCCTGCGTTCGATCCTCGAAGGCGTGTTGCTCGATACCATGTATGAGATCCCTTCGAAAAAGGATGTCAGCAAGGTGGTTATCGACGAGAGCGTCATTGAGGG > NC_002947/2630016‑2630305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |