| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 27,584 | A→G | 15.0% | intergenic (‑431/+15) | PP_0022 ← / ← PP_0023 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 27,584 | 0 | A | G | 15.0% | 152.7 / 18.1 | 67 | intergenic (‑431/+15) | PP_0022/PP_0023 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (26/30); new base G (3/7); total (29/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.95e-01 | |||||||||||
AGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATG > NC_002947/27436‑27728 | aGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCga < 4:178299/149‑1 (MQ=255) tcgtcgTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCACTCGGGAgc > 7:289099/1‑149 (MQ=255) cGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCTCGGGAGCTGCttttt < 6:294394/149‑1 (MQ=255) cGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCttttt < 6:35542/149‑1 (MQ=255) gCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCTCGGGAGCTGCtttttt < 7:11476/149‑1 (MQ=255) cACTGAAGGGATAACCGATCCTGAGTTAGCTTAAGAATCCATCAAGCAAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCTCGGGAGCTGCttttttt < 8:289099/149‑2 (MQ=255) cTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCTCGGGAGCTGCTtttttttt < 2:290490/149‑1 (MQ=255) cTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGGCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCTCGGGAGCTGCTtttttttt < 2:229892/149‑1 (MQ=255) tGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACTCGGTCCGATTGATCAGCGAGACGGTCGTGAGCGTTTGCACACAGACCC‑AAAAA‑AAAAGCAGCTACCGAGAGCTGCTTTTTTCtt > 7:234749/1‑148 (MQ=255) tGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTc < 2:263644/146‑1 (MQ=255) tGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTc > 1:263644/1‑146 (MQ=255) gAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGAACCCCGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGCGCTGCTTTTTTCTTAc > 4:9682/1‑149 (MQ=255) aatggATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGTAAGACTCACGACGCTGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTAc < 8:109/145‑1 (MQ=255) aaGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACt > 1:274696/1‑149 (MQ=255) aaGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGGTTGCACACAGCCCC‑AAAAA‑AAAAGCACCTCCCGAGAGCTGCTTTTTTCTTa < 5:254404/147‑1 (MQ=255) gggATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTcc > 8:204833/1‑149 (MQ=255) ccGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCtttt > 3:263362/1‑149 (MQ=255) tCCGGAGGTAGCTTCAGAATCCATCAATCAAAGCGGAAGACTCACGACGCGGTCCGAATGATCAGCGAGACGGTCGTGAGGGATTGCACACAGCCCC‑AAAAA‑AAAACCAGATCCCCACACCTGCTTATTAATTACACACCCGTTTagt > 8:37737/1‑148 (MQ=255) ggAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCtt > 1:136151/1‑149 (MQ=255) cTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGtt > 8:7421/1‑149 (MQ=255) ttCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTAATCCCCCTTTTTGTGCTTGTGGGGtt > 8:161116/1‑148 (MQ=255) tCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGACACGGTCGTGAGGGTATGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCAGCTTTTTTCTTACTCCCCCTATTTTTGCTTGTGGGGttt > 4:85490/1‑148 (MQ=255) cAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGttt > 3:265716/1‑147 (MQ=255) cAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTc < 4:263362/148‑1 (MQ=255) gAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAgg > 5:265652/1‑149 (MQ=255) aaTCCATCAAGCCAAGGGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGt < 7:38346/149‑1 (MQ=255) aTCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGt > 8:38346/1‑148 (MQ=255) tCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTcc < 6:265652/149‑1 (MQ=255) cATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCgg > 7:277239/1‑149 (MQ=255) aagccaagcGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATg < 7:204833/148‑1 (MQ=255) caagcGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTgg > 4:172534/1‑127 (MQ=255) caagcGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTgg < 3:172534/127‑1 (MQ=255) agcGGAAGACTCACGACGCGGTCCGTTTGATCAGCGAGACGGTCGTGTGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTc < 3:85490/149‑1 (MQ=255) tCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCCAAAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCtttt > 1:102374/1‑147 (MQ=255) acgccgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAgg < 8:234749/148‑1 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAggg < 2:274696/149‑1 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAggg > 5:6370/1‑149 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAggg < 4:265716/149‑1 (MQ=255) acgacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAggg > 1:135650/1‑149 (MQ=255) gacgCGGTCCTTTTTATCTTCGAGCCGGTCGTGCTGGTTTGCTCACAGGCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCGCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGt < 2:79214/149‑1 (MQ=255) gacgCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGt < 6:6370/149‑1 (MQ=255) gTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACCCACCCCC‑AAAAACAACAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTc < 4:199417/149‑1 (MQ=255) ccGATTCTTCAGCCTGTCGGTCGTGAGTGTTTGCACACAGCCCC‑AAAAT‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCt < 7:37737/149‑1 (MQ=255) cGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTg > 2:219640/1‑149 (MQ=255) gATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGc < 6:221445/149‑1 (MQ=255) tCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTATTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGTTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCTCTGCATTTTg > 7:165990/1‑149 (MQ=255) aGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTc < 2:136151/149‑1 (MQ=255) cGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCg < 1:219640/149‑1 (MQ=255) gTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTc < 5:50449/92‑1 (MQ=255) gTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTc > 6:50449/1‑92 (MQ=255) acaGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTATGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCt > 3:303411/1‑149 (MQ=255) gCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTg < 7:161116/149‑1 (MQ=255) cccc‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGAGGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTgg > 3:249594/1‑149 (MQ=255) gagtaagaa‑aaaaGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTgg < 1:164387/142‑1 (MQ=255) ta‑aaaaGCAGCTCCCGCGAGGTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGc < 8:165990/148‑1 (MQ=255) aa‑aaaaGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCa > 6:174868/1‑122 (MQ=255) aa‑aaaaGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCa < 5:174868/122‑1 (MQ=255) aaaaGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCtt < 2:102374/149‑1 (MQ=255) aaaGCAGCTCTCGGGAGCTGCTTTTTTTTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGt < 8:235974/91‑1 (MQ=255) aaaGCAGCTCTCGGGAGCTGCTTTTTTTTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTACGGATGGTCCTTCTGCTTTTCAGGGGt > 7:235974/1‑91 (MQ=38) aaGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGa < 7:7421/149‑1 (MQ=255) aaGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGa < 2:135650/149‑1 (MQ=255) aaGCAGATCCCGATAGCTGCTTTTTTCTTACTCCCCCGAGTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGa < 4:68807/149‑1 (MQ=255) cagcTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGc < 3:9682/149‑1 (MQ=255) ctctCGGGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCa < 7:69340/79‑1 (MQ=255) ctctCGGGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCa > 8:69340/1‑79 (MQ=255) cTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCa < 8:277239/149‑1 (MQ=255) ccGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATg > 2:4417/1‑148 (MQ=255) | AGTCTCGTCGTCCGCACTGAAGGGATAACCGATCCGGAGGTAGCTTCAGAATCCATCAAGCCAAGCGGAAGACTCACGACGCGGTCCGATTGATCAGCGAGACGGTCGTGAGGGTTTGCACACAGCCCC‑AAAAA‑AAAAGCAGCTCCCGAGAGCTGCTTTTTTCTTACTCCCCCTTTTTGTGCTTGTGGGGTTTCAGGTCCGGATGGTCCTTCTGCTTTTCAGGGGTGACTCGCTGCCTTTTGTCCGGAGTGCCATCTTCATTGGTGCGCTTTGGGCCTGGCTTGATGCTCATG > NC_002947/27436‑27728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |