| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 280,201 | C→G | 9.4% | L16L (CTG→CTC) ‡ | sctS ← | sulfur compound ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 280,201 | 0 | C | G | 9.4% | 254.7 / 13.6 | 85 | L16L (CTG→CTC) ‡ | sctS | sulfur compound ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (34/43); new base G (3/5); total (37/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.29e-01 | |||||||||||
CCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCCGG > NC_002947/280055‑280349 | ccGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTcagca < 5:117265/148‑1 (MQ=255)ccGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTcagca < 5:149056/148‑1 (MQ=255) gcgGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGAGTAACCCGCGCCCTTCAGCAGGa < 7:229135/149‑1 (MQ=255) gaaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGgcg < 2:87492/149‑1 (MQ=255) aaCGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGgcgc > 2:255269/1‑149 (MQ=255) cGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg < 5:163260/149‑1 (MQ=255) cGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg < 2:115405/149‑1 (MQ=255) gACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGcgcg > 6:117909/1‑147 (MQ=255) gACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGa < 6:234346/149‑1 (MQ=255) acGTAGCCCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCGCAGGAAGGGCGCGGAGTc > 4:205773/1‑149 (MQ=255) gTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGa > 5:103571/1‑149 (MQ=255) gTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGa < 5:117909/149‑1 (MQ=255) ccGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGcgcg < 1:279755/136‑1 (MQ=255) ccGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGcgcg > 2:279755/1‑136 (MQ=255) ccGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGa > 8:323113/1‑149 (MQ=255) ccGCCCCAGCCAGTGCCGCGGCATAATCTTCGACACCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACCTGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGa < 8:318557/149‑1 (MQ=255) cgcgCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg < 4:258834/136‑1 (MQ=255) cgcgCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg > 3:258834/1‑136 (MQ=255) cgcgCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAg > 4:139743/1‑149 (MQ=255) gcgcCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGt > 6:170193/1‑149 (MQ=255) ccagccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGc < 1:319370/149‑1 (MQ=255) cagccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCATCACCTTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCa < 6:300871/149‑1 (MQ=255) cagccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCa < 4:131121/149‑1 (MQ=255) agccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGCAGGGCGCGGAGTCGACAACGAGTTGCAg > 5:158135/1‑149 (MQ=255) ccagTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGc > 7:122648/1‑149 (MQ=255) cAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCa < 3:238320/148‑1 (MQ=255) aGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGc > 6:97296/1‑149 (MQ=255) gCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCg < 8:77357/149‑1 (MQ=255) ggCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAg < 2:358292/145‑1 (MQ=255) ggCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAg > 1:358292/1‑145 (MQ=255) gCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg > 5:215663/1‑117 (MQ=255) gCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCCTGCTGAAGGGCGCgg < 6:215663/117‑1 (MQ=255) cAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGaa > 8:133186/1‑108 (MQ=255) cAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGaa < 7:133186/108‑1 (MQ=255) cAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTc < 8:22352/120‑1 (MQ=255) cAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTc > 7:22352/1‑120 (MQ=255) cAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCa < 3:139743/149‑1 (MQ=255) ttCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGt > 6:264575/1‑148 (MQ=255) cGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTgg < 1:46333/145‑1 (MQ=255) gCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAATGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCgg > 4:170443/1‑149 (MQ=255) ccGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTc > 5:25359/1‑126 (MQ=255) ccGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTc < 6:25359/126‑1 (MQ=255) gcgcCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAg > 6:152838/1‑148 (MQ=255) cgcCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTa < 6:103571/149‑1 (MQ=255) gcCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTAc < 6:157654/149‑1 (MQ=255) cAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACaa < 6:339319/98‑1 (MQ=255) cAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACaa > 5:339319/1‑98 (MQ=255) aGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACtt < 1:50984/148‑1 (MQ=255) aGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACtt > 2:50984/1‑148 (MQ=255) gggCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTtct < 5:170193/149‑1 (MQ=255) ggCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTtctc < 3:345536/149‑1 (MQ=255) aGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGa > 2:346237/1‑147 (MQ=255) aGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGGGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTg < 1:255269/149‑1 (MQ=255) cacaAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCATGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTAAGCGATCAtttc > 4:89139/1‑110 (MQ=255) cACCAGACCGAAGAACATGCGGGCTACACTGATCAGCACCGTATAACCCGCGGCCTTCAGCAGGAATGGCGCGGAGTCGACAACGTGTTGCAGGCTTTCAGCGATCATTTg < 3:89139/111‑1 (MQ=255) ccAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCa < 5:97296/149‑1 (MQ=255) ccGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTgg < 5:308102/141‑1 (MQ=255) ccGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTgg > 6:308102/1‑141 (MQ=255) ccGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑g < 5:264575/149‑1 (MQ=255) ccGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑g < 7:323113/149‑1 (MQ=255) cGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑Gc > 4:207748/1‑149 (MQ=255) aagaaCATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGc < 3:7601/81‑1 (MQ=255) aagaaCATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGc > 4:7601/1‑81 (MQ=255) ccgccgACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAATGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCttt < 3:170443/148‑1 (MQ=255) cgccgACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGa < 3:207748/149‑1 (MQ=255) gccgACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCa > 4:311383/1‑141 (MQ=255) gccgACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCa < 3:311383/141‑1 (MQ=255) gccgACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAg < 2:346078/149‑1 (MQ=255) acTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACATCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTc > 4:225300/1‑149 (MQ=255) acTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGa < 5:220462/142‑1 (MQ=255) acTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGa > 6:220462/1‑142 (MQ=255) gcagcaCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTg < 6:211221/115‑1 (MQ=255) cagcaCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGTCAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGc < 3:205773/149‑1 (MQ=255) cagcaCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGc > 6:293406/1‑149 (MQ=255) gcaCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGc < 4:70082/136‑1 (MQ=255) gcaACGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGc > 3:70082/1‑136 (MQ=255) caCCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCtt > 8:31524/1‑149 (MQ=255) ccGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCttgt < 5:293406/149‑1 (MQ=255) taACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGTCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGAt < 7:31524/148‑1 (MQ=255) taACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATg > 3:289089/1‑149 (MQ=255) ccGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTg > 1:100004/1‑149 (MQ=255) ccGCGCCCTACAGCAGGACGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTg < 8:122648/149‑1 (MQ=255) gcCCTTCAGCAGGCAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCaa < 6:158135/149‑1 (MQ=255) gcCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCtt > 1:56360/1‑134 (MQ=255) gcCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCtt < 2:56360/134‑1 (MQ=255) gcCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCaa < 1:346237/149‑1 (MQ=255) ttCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGt > 8:172227/1‑149 (MQ=255) agcagGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGTAGCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTc < 1:271191/149‑1 (MQ=255) agcagGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTcc < 2:100004/149‑1 (MQ=255) gcagGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCATTCAGCGATCATTTGGAGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGACAGCGT‑GAGATCAGCTTTGAGCTTCTCGAAGGCCTTGTTGATGGCTGCCAAAAGTTc > 1:272737/1‑147 (MQ=255) caggcaggGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCCgg < 5:199605/149‑1 (MQ=255) | CCGCGGAAGAACGACACGTAGACCCGCGCCAGCCAGTTCAGCGGCAGAATCTTCGACAGCCGCATCAGCGCCAGGGCAAAGCCCAGCACCAGACCGAAGAACATGCCGCCGACACTGAGCAGCACCGTATAACCCGCGCCCTTCAGCAGGAAGGGCGCGGAGTCGACAACGAGTTGCAGGCTTTCAGCGATCATTTGGTGACATCGGCACCGAAGTACTTCTCGGACAGCTTGGCCAGCGT‑GCCATCAGCTTTGAGCTTGTCGATGGCCTTGTTGATGGCTGCCAACAGTTCCGG > NC_002947/280055‑280349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |