| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,029,214 | G→C | 6.2% | L289F (TTG→TTC) | pcaY → | aromatic acid chemoreceptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,029,214 | 0 | G | C | 6.2% | 246.0 / 4.0 | 76 | L289F (TTG→TTC) | pcaY | aromatic acid chemoreceptor |
| Reads supporting (aligned to +/- strand): ref base G (37/34); new base C (3/2); total (40/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCTGAGTGTGCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCC > NC_002947/3029069‑3029361 | aCCTGAGTGTGCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTAGAAc > 2:312714/1‑149 (MQ=255) cTGAGTGTGCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGc > 6:110631/1‑149 (MQ=255) aGTGTGCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGcc < 4:143351/147‑1 (MQ=255) tgtgCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCa > 5:142807/1‑149 (MQ=255) tgCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCAcc > 8:87331/1‑149 (MQ=255) ccGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGa < 6:190094/149‑1 (MQ=255) tGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGa > 3:161217/1‑148 (MQ=255) gCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGcc > 8:199844/1‑148 (MQ=255) ggTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCcaacaa > 8:68051/1‑149 (MQ=255) ggTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCcaacaa > 7:90502/1‑149 (MQ=255) caacGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGc < 5:110631/149‑1 (MQ=255) caacGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGc < 7:82956/149‑1 (MQ=255) aacGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCTCCGAGGAAAGCGCCAACAACCTGCg > 8:182990/1‑149 (MQ=255) aacGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCg > 8:181427/1‑149 (MQ=255) gAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGc > 8:267227/1‑145 (MQ=255) gAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGc < 7:267227/145‑1 (MQ=255) gAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTca < 6:142807/149‑1 (MQ=255) gAAATCGGCCAAATGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTCAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTca > 2:268591/1‑149 (MQ=255) ggCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAgg < 2:335049/148‑1 (MQ=255) ggCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAgg < 7:87331/148‑1 (MQ=255) gCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAgggg < 1:312714/149‑1 (MQ=255) cAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCa < 1:184789/149‑1 (MQ=255) aaCTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAg > 6:61889/1‑149 (MQ=255) aaCTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAg > 6:136802/1‑149 (MQ=255) aaCTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAg > 6:142375/1‑149 (MQ=255) cTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCTCCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGa < 7:182990/149‑1 (MQ=255) ttCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAg < 5:136802/147‑1 (MQ=255) ttCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAg < 5:61889/147‑1 (MQ=255) ttCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAg < 5:142375/147‑1 (MQ=255) aTGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTcagcag < 8:103986/134‑1 (MQ=255) aTGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTcagcag > 7:103986/1‑134 (MQ=255) aGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCa < 1:68708/148‑1 (MQ=255) cAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGGAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGgccgc > 4:53721/1‑149 (MQ=255) cAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCAACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGgccgc > 8:71013/1‑149 (MQ=255) cagAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGAc > 3:190420/1‑149 (MQ=255) ccAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGaaa > 5:117088/1‑149 (MQ=255) ccAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGaaa < 7:199844/149‑1 (MQ=255) ccAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGaaa > 6:207602/1‑149 (MQ=255) cAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAAt > 4:169226/1‑149 (MQ=255) gcgcGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAg < 3:250093/121‑1 (MQ=255) gcgcGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAg > 4:250093/1‑121 (MQ=255) gcgcGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGt > 8:31181/1‑138 (MQ=255) gcgcGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGt < 7:31181/138‑1 (MQ=255) gcgcGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGCAGCAGGCCGCCACTGCCGTGACCGAAATGa > 8:331968/1‑149 (MQ=255) gcgACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGAc > 7:80070/1‑148 (MQ=255) cacTATGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACTCCTCCGCCACGGCGTTGAACGCCGGCACCGAGGAAAGCTCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCTAAATGACCACgg < 6:239864/149‑1 (MQ=255) tGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCACCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTg > 8:59472/1‑149 (MQ=255) ggggCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGc < 6:63566/98‑1 (MQ=255) ggggCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGc > 5:63566/1‑98 (MQ=255) gggCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTgg < 7:68051/148‑1 (MQ=255) caacaaCTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACgg > 1:240398/1‑134 (MQ=255) caacaaCTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACgg < 2:240398/134‑1 (MQ=255) aacaacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCATTGGAGGAATTTgc > 8:169071/1‑149 (MQ=255) acaacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGc > 6:255849/1‑112 (MQ=255) acaacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGc < 5:255849/112‑1 (MQ=255) acaacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTgcg < 1:268591/149‑1 (MQ=255) caacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTgcgc < 6:117088/149‑1 (MQ=255) caacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTgcgc < 7:331968/149‑1 (MQ=255) aacTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTAACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTTCCGTGCACGAAAAGAACACGGCCGTGGAGGAAGTTgctcg > 8:294034/1‑149 (MQ=255) tgtgCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCaa > 2:234137/1‑149 (MQ=255) tgCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTgcgc < 6:318672/143‑1 (MQ=255) tgCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTgcgc > 5:318672/1‑143 (MQ=255) cGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTgcgc < 7:155944/139‑1 (MQ=255) cGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTgcgc > 8:155944/1‑139 (MQ=255) cAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCACCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATcac < 7:59472/149‑1 (MQ=255) cTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATcaccac < 7:213093/149‑1 (MQ=255) gccgccgccACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGACGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAAAGCGATCACCACCTCGc > 8:117306/1‑148 (MQ=255) cggtgaCGGCGTTCAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAac > 3:96076/6‑148 (MQ=255) cgccACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGAACACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAacca > 6:347734/1‑149 (MQ=255) gtgaCGGCGTTCAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGt > 2:299705/4‑107 (MQ=255) gtgaCGGCGTTCAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGt < 1:299705/104‑1 (MQ=255) cACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAAccacca < 7:294034/149‑1 (MQ=255) aCGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAg < 3:169226/149‑1 (MQ=255) aCGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAg > 8:218580/1‑149 (MQ=255) cGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGt < 5:347734/149‑1 (MQ=255) gTTCAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAAt < 4:96076/149‑1 (MQ=255) gAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTTCCGTGACCGAAATGAACACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATcc < 7:169071/148‑1 (MQ=255) gAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAAcgc > 5:296632/1‑117 (MQ=255) gAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAAcgc < 6:296632/117‑1 (MQ=255) gAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATcc > 6:267929/1‑148 (MQ=255) gAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATcc > 7:47629/1‑148 (MQ=255) | ACCTGAGTGTGCCGGTGCAAGGGCAGGGTAACAACGAAATCGGCCAACTGTTCCATGAGCTCCAGCGCATGCAGCAGAGCCAGCGCGACACTCTGGGGCAGATCAACAACTGTGCCCGGCAGCTGGACGCCGCCGCCACGGCGTTGAACGCCGTCACCGAGGAAAGCGCCAACAACCTGCGTCAGCAGGGGCAGGAGCTGGAGCAGGCCGCCACTGCCGTGACCGAAATGACCACGGCAGTGGAGGAAGTTGCGCGCAACGCGATCACCACCTCGCAAACCACCAGTGAATCC > NC_002947/3029069‑3029361 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |