Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,049,379 A→T 6.3% Y180F (TAC→TTC)  PP_2662 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,049,3790AT 6.3% 187.0 / 3.0 63Y180F (TAC→TTC) PP_2662hypothetical protein
Reads supporting (aligned to +/- strand):  ref base A (28/31);  new base T (2/2);  total (30/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.56e-01

GGCGAGGTGCTGATCGGCAAGGACTTCGGGCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTACCAGGAAAACC  >  NC_002947/3049231‑3049513
                                                                                                                                                    |                                                                                                                                       
ggCGAGGTGCTGATCGGCAAGGACTTCGGGCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTa                                                                                                                                         >  2:285463/1‑149 (MQ=255)
  cGAGGTGCTGATCGGCAAGGACTTCGGGCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTAcc                                                                                                                                       <  1:328903/149‑1 (MQ=255)
        gCTGATCGGCAAGGACTTCGGGCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATAcc                                                                                                                                >  1:332897/1‑149 (MQ=255)
        gCTGATCGGCAAGGACTTCGGGCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGACAGGTCAGCGACACCCTGGGGCTGGAGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATAcc                                                                                                                                >  5:247755/1‑149 (MQ=255)
             tCGGCAAGGACTTCGGGCTGTACGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTc                                                                                                                           <  7:346838/149‑1 (MQ=255)
                gCAAGGACTTCGGGCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTccc                                                                                                                         >  3:20207/1‑148 (MQ=255)
                  aaGGACTTCGGGCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTAc                                                                                                                      <  4:260200/149‑1 (MQ=255)
                        ttCGGGCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTca                                                                                                                  >  4:330631/1‑147 (MQ=255)
                        ttCGGGCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGACGGTTATGGCCAGGTCAGCGACACCCTGGGGCTCGTGGACGGCGGCTGGCTGTCGTTCGGCAACATTGGCAGCGGTTAACC‑ATACCCCTTCCCTACCTca                                                                                                                  >  5:34391/1‑147 (MQ=255)
                             gCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCa                                                                                                           >  4:182855/1‑149 (MQ=255)
                              cgaacagCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCAc                                                                                                          <  6:118864/143‑1 (MQ=255)
                               tGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTc                                                                                                                           >  5:199893/1‑131 (MQ=255)
                               tGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTc                                                                                                                           <  6:199893/131‑1 (MQ=255)
                                 ttCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTa                                                                                                       <  6:247755/149‑1 (MQ=255)
                                     cccGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGt                                                                                                   <  8:73186/149‑1 (MQ=255)
                                      ccGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTa                                                                                                  >  3:170608/1‑149 (MQ=255)
                                             aaCATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTAc                                                                                                                                        >  8:203155/1‑105 (MQ=255)
                                             aaCATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTAc                                                                                                                                        <  7:203155/105‑1 (MQ=255)
                                             aaCATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGt                                                                                           >  7:64671/1‑149 (MQ=255)
                                             aaCATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACAACCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGt                                                                                           >  4:262643/1‑149 (MQ=255)
                                                    tGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTa                                                                                                       <  3:171828/130‑1 (MQ=255)
                                                    tGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTa                                                                                                       >  4:171828/1‑130 (MQ=255)
                                                      cTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAggg                                                                                  >  3:274736/1‑149 (MQ=255)
                                                         gacgaACTGCTGGCCGGTTATGGCCAGGTCTGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGcc                                                                                >  1:31037/1‑148 (MQ=255)
                                                         gacgaACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGc                                                                                 <  2:332897/147‑1 (MQ=255)
                                                         gacgaACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGc                                                                                 <  4:170608/147‑1 (MQ=255)
                                                             aaCTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACgg                                                                           <  4:20207/149‑1 (MQ=255)
                                                             aaCTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACgg                                                                           <  3:330631/149‑1 (MQ=255)
                                                              aCTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTTGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACggg                                                                          <  8:64671/149‑1 (MQ=255)
                                                              aCTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCCGTTACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACgg                                                                           <  1:285463/149‑1 (MQ=255)
                                                                   tgGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑At                                                                                                                                   >  1:205128/1‑87 (MQ=255)
                                                                   tgGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑At                                                                                                                                   <  2:205128/87‑1 (MQ=255)
                                                                     gCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGt                                                                   >  7:336430/1‑149 (MQ=255)
                                                                     gCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGt                                                                   <  2:31037/149‑1 (MQ=255)
                                                                      ccGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTg                                                                  <  6:171159/149‑1 (MQ=255)
                                                                       cGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTgg                                                                 <  4:274736/149‑1 (MQ=255)
                                                                                ccAGGTCAGCGACACCCTGGGACTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATg                                                         >  2:256003/1‑148 (MQ=255)
                                                                                 cAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGAGGTTACCC‑ATACCCGTTCACTACCTCACAGATCACCTACCGTACGCCCGTGATGTAGGGCCTACGGGTTGCGGTGGGCATCATGGa                                                       >  3:315601/1‑149 (MQ=255)
                                                                                     tCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCg                                                   >  3:234619/1‑149 (MQ=255)
                                                                                          gACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGa                                              <  3:262643/149‑1 (MQ=255)
                                                                                             acCCTGGGGCTGGTGGACGGCGGCTGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTg                                                <  4:109031/144‑1 (MQ=255)
                                                                                             acCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTg                                                >  3:109031/1‑144 (MQ=255)
                                                                                               ccTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACAcc                                          >  1:154950/1‑148 (MQ=255)
                                                                                               ccTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACAcc                                          >  6:144461/1‑148 (MQ=255)
                                                                                                   gggCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAAc                                       <  4:234619/147‑1 (MQ=255)
                                                                                                   gggCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAAc                                       <  3:182855/147‑1 (MQ=255)
                                                                                                    gacTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCTTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGAc                                    <  1:256003/147‑1 (MQ=255)
                                                                                                      cTGGTGGACGGCGGCGGGGTGACGTTCGGCAACATTGGCAGCGATTACCC‑ATAACCGATACCTACCTCACAGATCACCAACCGTACGCCCGTCATGGAGGGCCTACGCGTTGCGGTCGGCCTCATGGACCAGGTGGACACAAAAGa                                     >  8:330752/1‑146 (MQ=255)
                                                                                                         gtggAGGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACGGTACGCGCGTTATGGAGGGCCTACGGGTTGCGGTGGGCTTCATGGACCCGGTGGACACCAACGAcagca                                <  6:34391/148‑1 (MQ=255)
                                                                                                          tggACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACagcagc                              >  6:228439/1‑149 (MQ=255)
                                                                                                                 cggcggGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCg                       <  2:154950/149‑1 (MQ=255)
                                                                                                                           tCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTAACGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTa             >  7:835/1‑149 (MQ=255)
                                                                                                                            cGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTAc            <  5:228439/149‑1 (MQ=255)
                                                                                                                              ttCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTACCa          <  8:336430/149‑1 (MQ=255)
                                                                                                                                cGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTACCAg         <  8:835/148‑1 (MQ=255)
                                                                                                                                 ggCAACATTGGCAGCGGTTACGC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTTCTCCAGTGATGTAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGAGACCAACGACAGCAGCCCGACCGGAAAGGCCTACCAgg        <  4:315601/148‑1 (MQ=255)
                                                                                                                                  gCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTACCAGGa       >  3:359840/1‑148 (MQ=255)
                                                                                                                                    aaCATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTACCAGGaaaa    <  1:267920/149‑1 (MQ=255)
                                                                                                                                    aaCATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCACGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTACCAGGaaaa    >  6:62907/1‑149 (MQ=255)
                                                                                                                                      cATTGGCAGCGGTTTCCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGc                >  7:294474/1‑135 (MQ=255)
                                                                                                                                      cATTGGCAGCGGTTTCCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGc                >  7:289191/1‑135 (MQ=255)
                                                                                                                                      cATTGGCAGCGGTTTCCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGc                <  8:289191/135‑1 (MQ=255)
                                                                                                                                      cATTGGCAGCGGTTTCCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGc                <  8:294474/135‑1 (MQ=255)
                                                                                                                                      cATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTACCAGGAAAAcc  >  1:259397/1‑149 (MQ=255)
                                                                                                                                                    aCCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTACCAGGaaaa    >  3:222677/1‑133 (MQ=255)
                                                                                                                                                    aCCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTACCAGGaaaa    <  4:222677/133‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                       
GGCGAGGTGCTGATCGGCAAGGACTTCGGGCTGTTCGCCCGATCCAACATCCTGCTCGACGAACTGCTGGCCGGTTATGGCCAGGTCAGCGACACCCTGGGGCTGGTGGACGGCGGCGGGGTGTCGTTCGGCAACATTGGCAGCGGTTACCC‑ATACCCGTTCCCTACCTCACAGATCACCTACCGTACGCCCGTGATGGAGGGCCTACGGGTTGCGGTGGGCATCATGGACCCGGTGGACACCAACGACAGCAGCCCGACCGGAAAGGCCTACCAGGAAAACC  >  NC_002947/3049231‑3049513

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑