| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,074,213 | A→C | 6.8% | intergenic (+248/‑182) | PP_2683 → / → PP_2684 | two‑component system sensor histidine kinase/response regulator/membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,074,213 | 0 | A | C | 6.8% | 223.7 / 6.2 | 74 | intergenic (+248/‑182) | PP_2683/PP_2684 | two‑component system sensor histidine kinase/response regulator/membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (35/34); new base C (3/2); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01 | |||||||||||
AAGAAGTTAGTAAACTAACTAATACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAATTAACGATATG > NC_002947/3074066‑3074360 | aagaagTTAGTAAACTAACTAATACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCATATATGCCAGCGAATGTGTTCTTCAAGTACAACACTTCGCACATCTCCCCAGAACGTAc > 3:263900/1‑149 (MQ=255) aagTTAGTAAACTAACTAATACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTgg < 6:189460/149‑1 (MQ=255) gTAAACTAACTAATACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGtt > 5:170156/1‑148 (MQ=255) gTAAACTAACTAATACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGtt < 2:30384/148‑1 (MQ=255) gTAAACTAACTAATACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTc < 6:170156/149‑1 (MQ=255) tAAACTAACTAATACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTc > 7:276590/1‑148 (MQ=255) aaaCTAACTAATACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCa > 1:227680/1‑148 (MQ=255) aactaactATTACGGCGTTAGATACCGCTTGTCGGTGCTTTTGCTGAATAAATGAACGATTTGCCAGTGGGTGGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTAGCACACTTCGCACGTCTCGCCAGAAGGTACAGTACGTTctg < 6:287102/148‑3 (MQ=255) taactaaTACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTAAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACtt > 5:209842/1‑148 (MQ=255) aactaaTACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGa > 3:208003/1‑149 (MQ=255) taaTACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGAttt > 7:107386/1‑149 (MQ=255) tACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGaa < 4:185924/149‑1 (MQ=255) tACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATg > 3:221103/1‑148 (MQ=255) cGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCa < 1:1093/139‑1 (MQ=255) cGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCa > 2:1093/1‑139 (MQ=255) gTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCtttt > 3:171055/1‑149 (MQ=255) tGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCttttt < 1:248835/149‑1 (MQ=255) ttttGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTAc > 5:162563/1‑149 (MQ=255) ttGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTAc < 5:169463/147‑1 (MQ=255) ttGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTAc < 4:192785/147‑1 (MQ=255) gCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACctc < 8:276590/148‑1 (MQ=255) cTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACctct < 4:208003/148‑1 (MQ=255) tCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGa > 7:197738/1‑149 (MQ=255) aaGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGAc > 5:34500/1‑148 (MQ=255) aaGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGAc > 3:56152/1‑148 (MQ=255) aaGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGAc > 8:291886/1‑148 (MQ=255) gAAATGCACGAGTTGCCAGTGGGTCGTTCCTATTTGCCAGCTAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGATTCGCAGGGATGCACACGGGCTTTTTTACCTCTGTCAAt < 4:20062/149‑1 (MQ=255) aaaTGATCGTTTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATg < 4:263900/149‑1 (MQ=255) aaaTGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATg < 7:291886/149‑1 (MQ=255) aaTTAACGTTTTGCCTGTGGGGCGTTCCTATTTGCCATGGTATTTGTTCTTCAAGTACCACACTTCGCAACTCTCCCCAGTACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATg < 8:229650/148‑1 (MQ=255) aTGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTAAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGa < 6:209842/149‑1 (MQ=255) gAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAg > 3:20586/1‑148 (MQ=255) cGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAAc < 4:56152/149‑1 (MQ=255) gATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATg < 1:110955/113‑1 (MQ=255) gATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATg > 2:110955/1‑113 (MQ=255) gATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACg > 7:16930/1‑149 (MQ=255) aGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTc > 7:251392/1‑148 (MQ=255) ccAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCaa > 1:336462/1‑143 (MQ=255) ccAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCaa < 2:336462/143‑1 (MQ=255) ccAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGtt > 8:249005/1‑148 (MQ=255) cAGCGAATGTGTTCTTCGAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATTGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGtt > 5:64543/1‑147 (MQ=255) gAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGGCa > 4:254090/1‑149 (MQ=255) aaTGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCAc > 8:186230/1‑149 (MQ=255) tgtgTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCAcag > 5:160971/1‑147 (MQ=255) tgtTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACtgt < 8:197738/148‑1 (MQ=255) tgtTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACtgt < 6:34500/148‑1 (MQ=255) gtTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATg > 1:1386/1‑103 (MQ=255) gtTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATg < 2:1386/103‑1 (MQ=255) gtTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACtgtgt > 8:177225/1‑149 (MQ=255) tcAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAAt > 4:80355/1‑149 (MQ=255) cAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAAtt > 8:141428/1‑149 (MQ=255) aGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATTGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGa < 6:64543/149‑1 (MQ=255) aGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGa < 7:249005/149‑1 (MQ=255) tACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAg > 5:29649/1‑148 (MQ=255) tACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGt < 2:65822/149‑1 (MQ=255) ccACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAg > 4:94386/1‑114 (MQ=255) ccACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAg < 3:94386/114‑1 (MQ=255) cacaCTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAAc < 8:16930/149‑1 (MQ=255) aCCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGt < 7:186230/149‑1 (MQ=255) ctctCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGAAACCCTTTGCTGttt < 4:221103/149‑1 (MQ=255) ctcCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTc > 2:98896/1‑148 (MQ=255) ccccAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAAt < 4:20586/149‑1 (MQ=255) aagttgAACGTCCAGTACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAAt > 8:180447/6‑149 (MQ=255) aagttgAACGTCCAGTACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCAATGTCCAACCGAGGCTCAACGGTTGAGCCCCTGTGTGAAATTGAGTAACCCTTTTGTGTTTCAAt > 8:185520/6‑149 (MQ=255) cccAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAAtt < 6:29649/149‑1 (MQ=255) cccAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAAt > 5:336696/1‑148 (MQ=255) cccAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTAAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAAtt > 8:321148/1‑149 (MQ=255) agttgAACGTCCAGTACGTTCAACTTGATTTGAATCGCAGGTATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAAtt < 7:185520/145‑1 (MQ=255) agttgAACGTCCAGTACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAAtt < 7:180447/145‑1 (MQ=255) gttgAACGTCCAGTACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAAtt > 2:115463/4‑148 (MQ=255) aCGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGa < 3:119171/121‑1 (MQ=255) aCGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGa > 4:119171/1‑121 (MQ=255) aCGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAATTAACGat < 3:300094/149‑1 (MQ=255) aCGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCCCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACCGTGTGCAATTGAGTAACCCTTTGCTGTTTCAATTAACGat < 2:227680/149‑1 (MQ=255) aCTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAATTAACGATATg > 2:119990/1‑148 (MQ=255) aCTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAATTAACGATATg > 7:140322/1‑148 (MQ=255) | AAGAAGTTAGTAAACTAACTAATACGGCTTTAAATACCGCTGGTCGGTGCTTTTGCTCAAGAAATGAACGATTTGCCAGTGGGTCGTTCCTATTTGCCAGCGAATGTGTTCTTCAAGTACCACACTTCGCACCTCTCCCCAGAACGTACTGGACGTTCAACTTGATTTGAATCGCAGGGATGCACACGGGCTTTTTTACCTCTGACAATGGAGTAACGCCATGTCCAACCGAGGCTCAACGGTTGAGCCACTGTGTGCAATTGAGTAACCCTTTGCTGTTTCAATTAACGATATG > NC_002947/3074066‑3074360 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |