Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 284,587 | T→A | 15.4% | intergenic (+34/+29) | betT‑II → / ← atsK | choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 284,587 | 0 | T | A | 15.4% | 151.4 / 17.7 | 65 | intergenic (+34/+29) | betT‑II/atsK | choline/carnitine/betaine transporter/alpha‑ketoglutarate‑dependent sulfonate dioxygenase |
Reads supporting (aligned to +/- strand): ref base T (30/24); new base A (5/5); total (35/30) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.48e-01 |
GCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCC > NC_002947/284450‑284733 | gCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAaga < 1:274100/149‑1 (MQ=255) gCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑‑CTGGCCTCTTCGCGGGCAAGCCCGCGaa > 8:97805/1‑146 (MQ=255) gCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑‑CTGGCCTCTTCGCGGGCAAGCCCGCGAaga < 7:97805/148‑1 (MQ=255) cAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCTCGGGCTTGCCCGCGAagag < 4:246121/149‑1 (MQ=255) cAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAagag < 8:31549/149‑1 (MQ=255) cAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCAAGCCCGCGAagag < 1:230202/149‑1 (MQ=255) cAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTGCCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCAAGCCCGCGAAGAGGCCa < 7:289927/149‑1 (MQ=255) cAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGccc < 4:107106/137‑1 (MQ=255) cAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGccc > 3:107106/1‑137 (MQ=255) cAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGaa < 3:4301/142‑1 (MQ=255) cAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGaa > 4:4301/1‑142 (MQ=255) aGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGTAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGA‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGc > 4:50137/1‑146 (MQ=255) tATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAgg > 5:190480/1‑149 (MQ=255) tATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAgg > 5:262905/1‑149 (MQ=255) tggtggGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTGCTGT‑CCTGGCCTCTTCGCGGGCAAGCCCGCGaa > 1:294947/1‑129 (MQ=255) tggtggGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCAAGCCCGCGaa < 2:294947/129‑1 (MQ=255) ggtggGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑Gc > 1:20239/1‑148 (MQ=255) gCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGa > 3:235741/1‑147 (MQ=255) aCAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGt > 3:335204/1‑149 (MQ=255) gCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCaa < 4:335204/149‑1 (MQ=255) aGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAg > 1:351992/1‑148 (MQ=255) gATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGGGGCCAGACAGGCAACC‑GCTAGAAAGGTTCATCCCCAGGGa > 8:229073/1‑149 (MQ=255) gATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGa > 3:212037/1‑149 (MQ=255) tcatcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATg < 6:262905/149‑1 (MQ=255) tcatcaACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATg < 2:20239/149‑1 (MQ=255) cGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAATGATGGTCGccc > 1:155941/1‑149 (MQ=255) gACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCg < 4:235741/149‑1 (MQ=255) tCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCCGACAGGCCACC‑GCGAGAAAGGt > 1:346784/1‑119 (MQ=255) tCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGGCAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCAt > 8:250812/1‑148 (MQ=255) tCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCAt > 2:76379/1‑148 (MQ=255) aCCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCAcc > 6:302252/1‑149 (MQ=255) tACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACccgccg > 1:248462/1‑149 (MQ=255) gAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGtt < 2:19432/149‑1 (MQ=255) gcaattGCAGTACGTGCACCTGGTCCGCTGACAATGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCGGCTAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtc < 2:155941/144‑1 (MQ=255) acaTGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTtcggtcgg < 6:190480/149‑1 (MQ=255) ctaCCTGGGCCGCTGACCAAGCTCTCCTGT‑CGTGGCCTCTTCGCGGGCTGGCCCGCTATTTGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCAcc < 2:193965/146‑1 (MQ=255) ccTGGTCCGCTGACCAAGCTCTCCTGTGCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCAcc > 1:193965/1‑146 (MQ=255) ccTGGTCCGCTGACCAAGCTCTCCTGTGCCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCAcc > 1:199526/1‑146 (MQ=255) cGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCt < 4:212037/148‑1 (MQ=255) cGCTGACCAAGCTCTCCTGA‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTg < 3:50137/149‑1 (MQ=255) gCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTgg < 1:76379/149‑1 (MQ=255) gCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTgg > 3:268242/1‑149 (MQ=255) cTGACCATGCTCTCCTTT‑CCTGGCCTCTTCGCGGGATTGCCCGCTAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTggg < 2:351992/149‑1 (MQ=255) cTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTggg < 2:248462/149‑1 (MQ=255) ccAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCAc > 1:233668/1‑149 (MQ=255) cAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTg < 8:150138/142‑1 (MQ=255) cAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTg > 7:150138/1‑142 (MQ=255) aGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCAcgcg < 6:80313/149‑1 (MQ=255) gt‑cctgGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCa > 6:201926/1‑149 (MQ=255) t‑cctgGCCGCTTCGCGGGGTTGCCCGCGAATATGCCAGACAGGCAACC‑GCTAGAAACGTGCATCCCCAACGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCa < 7:229073/148‑1 (MQ=255) ggCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCAt > 6:270581/1‑84 (MQ=255) ggCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCAt < 5:270581/84‑1 (MQ=255) ctctTCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCa > 7:281857/1‑149 (MQ=255) tctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCACCC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc > 8:127/1‑149 (MQ=255) tctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGTCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTg > 7:303289/1‑122 (MQ=255) tctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGTCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTg < 8:303289/122‑1 (MQ=255) tctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc > 2:181648/1‑149 (MQ=255) tctTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGCTTCGGTAGGTAATCATCCACCGAAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc > 5:158886/1‑149 (MQ=255) tctTCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTAACGCGGTTGTCCCAGAACGCCAc > 7:73732/1‑149 (MQ=255) ttCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCAc < 2:233668/147‑1 (MQ=255) ttCGCGGGCAAGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGt > 3:237721/1‑149 (MQ=255) cgGGCAAGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCAtt < 8:281857/149‑1 (MQ=255) cTTGCCCGCGAAGAGGCCAGACAGGCAACCGGCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATtctc > 1:32578/1‑149 (MQ=255) cTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGCACGCCACGTCATTCTcc > 4:167084/1‑149 (MQ=255) cTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTcc < 5:201926/149‑1 (MQ=255) | GCAGCCAGAACTATGACCTGGTGGGCTACAGCAAGGAGCAGATCATCAACGACATCCTCGACCAGTACGAGCGGCACATGCAGTACCTGCACCTGGTCCGCTGACCAAGCTCTCCTGT‑CCTGGCCTCTTCGCGGGCTTGCCCGCGAAGAGGCCAGACAGGCAACC‑GCTAGAAAGGTGCATCCCCAAGGATGGTCGCCCGGTGCATCACCCGCCGGTTCGGTCGGTAATCATCCACCGCAAAATGCTGGGTCACGCGGTTGTCCCAGAACGCCACGTCATTCTCC > NC_002947/284450‑284733 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |