Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,403,812 C→T 6.8% P77L (CCA→CTA) ‡ PP_3014 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,403,8120CT 6.8% 176.0 / 2.1 59P77L (CCA→CTA) ‡PP_3014hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (26/29);  new base T (2/2);  total (28/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTGCGCAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGG  >  NC_002947/3403666‑3403959
                                                                                                                                                  |                                                                                                                                                   
ttGCGCAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCaa                                                                                                                                                   <  1:245329/149‑1 (MQ=255)
   cgcAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAgc                                                                                                                                                 <  1:44309/148‑1 (MQ=255)
        cccccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGcc                                                                                                                                                     <  4:346194/139‑1 (MQ=255)
        cccccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGcc                                                                                                                                                     >  3:346194/1‑139 (MQ=255)
         ccccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTgg                                                                                                                                          >  3:325823/1‑149 (MQ=255)
           ccGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAATACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCTTGGCGCCGTgagc                                                                                                                                        <  5:360507/149‑4 (MQ=255)
                aaaCCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGcga                                                                                                                                   <  6:177903/149‑1 (MQ=255)
                    ccACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGAt                                                                                                                               <  4:143309/149‑1 (MQ=255)
                          ccagccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCtt                                                                                                                         <  8:26644/149‑1 (MQ=255)
                          ccagccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCtt                                                                                                                         >  6:117113/1‑149 (MQ=255)
                           cagccaACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCtt                                                                                                                         >  5:222975/1‑148 (MQ=255)
                                aaCTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCTTGGCGCCGTgag                                                                                                                                         <  4:257860/127‑3 (MQ=255)
                                aaCTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCTTGGCGCCGTgag                                                                                                                                         >  3:257860/1‑125 (MQ=255)
                                aaCTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCaa                                                                                                                                       <  4:31162/129‑1 (MQ=255)
                                aaCTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCaa                                                                                                                                       >  3:31162/1‑129 (MQ=255)
                                  cTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGt                                                                                                                 <  1:15329/149‑1 (MQ=255)
                                     aCCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTg                                                                                                               <  4:325823/148‑1 (MQ=255)
                                     aCCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTg                                                                                                               <  3:57963/148‑1 (MQ=255)
                                       cAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACg                                                                                                            >  1:80776/1‑149 (MQ=255)
                                               cgccgcAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAg                                                                                                    >  8:129555/1‑149 (MQ=255)
                                                gccgcAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAgg                                                                                                   <  3:101819/149‑1 (MQ=255)
                                                gccgcAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAgg                                                                                                   <  5:117113/149‑1 (MQ=255)
                                                     agcagTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGc                                                                                              >  1:268938/1‑149 (MQ=255)
                                                      gcagTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGcc                                                                                             <  2:268938/149‑1 (MQ=255)
                                                      gcagTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGcc                                                                                             <  2:251423/149‑1 (MQ=255)
                                                          tACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAggg                                                                                                  >  8:75720/1‑140 (MQ=255)
                                                          tACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAggg                                                                                                  <  7:75720/140‑1 (MQ=255)
                                                             gccgccTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGAc                                                                                      >  3:136401/1‑149 (MQ=255)
                                                             gccgccTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGAc                                                                                      <  7:129555/149‑1 (MQ=255)
                                                              ccgccTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATCTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGAcc                                                                                     <  5:12229/149‑1 (MQ=255)
                                                                           gCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAggg                                                                          >  6:54524/1‑147 (MQ=255)
                                                                           gCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAggg                                                                          >  5:339589/1‑147 (MQ=255)
                                                                            ccGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAg                                                                                               <  1:61162/125‑1 (MQ=255)
                                                                            ccGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAg                                                                                               >  2:61162/1‑125 (MQ=255)
                                                                              gAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCt                                                                     >  8:182642/1‑149 (MQ=255)
                                                                                    gCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctgt                                                               >  1:188827/1‑149 (MQ=255)
                                                                                      aGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCACGACCTTCTACAAGGGCAGCTTtctgtct                                                             >  1:29097/1‑149 (MQ=255)
                                                                                        gcgcTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTgg                                                           <  6:222975/149‑1 (MQ=255)
                                                                                              gcgcCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGAc                                                       <  5:54524/147‑1 (MQ=255)
                                                                                              gcgcCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACaa                                                     <  4:136401/149‑1 (MQ=255)
                                                                                                gcCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGt                                                   >  2:8825/1‑149 (MQ=255)
                                                                                                       gCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctgtctg                                                            >  4:222769/1‑133 (MQ=255)
                                                                                                       gCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTtctgtctg                                                            <  3:222769/133‑1 (MQ=255)
                                                                                                       gCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTCACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGc                                              >  2:36965/1‑147 (MQ=255)
                                                                                                          aCGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTAGACACAAACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGc                                         >  1:116700/1‑149 (MQ=255)
                                                                                                                     gATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAg                                                                            >  7:180401/1‑103 (MQ=255)
                                                                                                                     gATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAg                                                                            <  8:180401/103‑1 (MQ=255)
                                                                                                                     gATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTCCGCCa                                            <  7:330666/135‑1 (MQ=255)
                                                                                                                     gATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCa                                            >  8:330666/1‑135 (MQ=255)
                                                                                                                      aTAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCa                                                                        <  8:324411/106‑1 (MQ=255)
                                                                                                                           ccACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTg                         >  1:165587/1‑148 (MQ=255)
                                                                                                                                   aCCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAg                                           <  7:188143/122‑1 (MQ=255)
                                                                                                                                   aCCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAg                                           >  8:188143/1‑122 (MQ=255)
                                                                                                                                   aCCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAAt                 >  4:235474/1‑148 (MQ=255)
                                                                                                                                    ccGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTc                                                                                  <  7:148557/82‑1 (MQ=255)
                                                                                                                                    ccGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTc                                                                                  >  8:148557/1‑82 (MQ=255)
                                                                                                                                    ccGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAAt                 <  2:188827/147‑1 (MQ=255)
                                                                                                                                    ccGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATc                <  3:235474/148‑1 (MQ=255)
                                                                                                                                    ccGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCa               <  6:339589/149‑1 (MQ=255)
                                                                                                                                        cTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGAGTGAATCAGTGa           >  8:100838/1‑149 (MQ=255)
                                                                                                                                         ccACGGCGCTTGGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACCAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGAc          >  4:181027/2‑149 (MQ=255)
                                                                                                                                                 ccAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCgg  <  5:209564/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
TTGCGCAACCCCCGGCAAACCCACTGCCAGCCAACTGACCAGGAAATCGCCGCAGCAGTACGCCGCCTGTGTCCTGCCGAAATGGCAGGCGCTGGCGCCACAGGCCACGCAGAAGTCGATAGCCCACGGCTACCGGCTCACGGCGCCAAGCGCCGTGGCAAGCGACGATGTGCTTGATGTGGTTGACGCTCACGAGGGCAGCCGCGCGACCTTCTACAAGGGCAGCTTTCTGTCTGGCGACAAGTTACGCCAGGCTGTCAGGCAATGCCTGGATTGAATCAGTGACCCGAGCGG  >  NC_002947/3403666‑3403959

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑