Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 3,422,810 | C→T | 14.5% | A323V (GCT→GTT) ‡ | PP_3038 → | TraC domain‑containing protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 3,422,810 | 0 | C | T | 14.5% | 148.4 / 15.1 | 62 | A323V (GCT→GTT) ‡ | PP_3038 | TraC domain‑containing protein |
Reads supporting (aligned to +/- strand): ref base C (25/28); new base T (5/4); total (30/32) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 7.28e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.71e-01 |
TGCTGCGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATGC > NC_002947/3422664‑3422953 | tgctgcGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACTGGCTa > 5:13389/1‑149 (MQ=255) cGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCACTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGt < 7:270527/149‑1 (MQ=255) gtggtTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTgg < 8:287215/149‑1 (MQ=255) tggtTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGc < 7:288376/149‑1 (MQ=255) gtTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCt < 8:108318/148‑1 (MQ=255) ggtgggggtggCCAGGTAGTCGGCCCGAGCTTCTGCGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGTAGCCGGGGGCt < 6:25735/143‑1 (MQ=255) gtgtgGGTGGGCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTgg < 2:93322/148‑1 (MQ=255) tgggtggCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAg < 5:293839/149‑1 (MQ=255) gggtggCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACTGGCTACCGGTGGCTGGAAgg < 6:13389/149‑1 (MQ=255) gggtggCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCCTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCTTTCGCCGGCAAGTCACGGCAGTTATCAAGCCACCGGCTACCGGTGGCTGGAAg > 4:133669/1‑148 (MQ=255) tggCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACa < 3:75779/149‑1 (MQ=255) gTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGTAGCCGGTGGc < 6:20906/132‑1 (MQ=255) gTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGTAGCCGGTGGc > 5:20906/1‑132 (MQ=255) tCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAg > 1:291176/1‑148 (MQ=255) gCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACt > 3:188950/1‑149 (MQ=255) cGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACt > 2:166311/1‑146 (MQ=255) gATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTga > 3:120346/1‑147 (MQ=255) aTCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGagag > 3:67088/1‑149 (MQ=255) tcttctCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCCAGCCACCGGTAGCCGGTGGCTTGat > 2:61803/1‑123 (MQ=255) tcttctCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCCAGCCACCGGTAGCCGGTGGCTTGat < 1:61803/124‑2 (MQ=255) tctcGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGaa < 2:351743/121‑1 (MQ=255) tctcGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGaa > 1:351743/1‑121 (MQ=255) ctcGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAgtggtg > 6:314958/1‑149 (MQ=255) ctcGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGGGGCTGGAAGGACATGCTGGCCAGGACTGAGAgtggt < 6:366827/148‑1 (MQ=255) tcGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGc > 4:255074/1‑149 (MQ=255) ggCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGTAGCCGGTGGCTTGatcact < 6:260584/121‑6 (MQ=255) ggCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGTAGCCGGTGGCTTGatcact > 5:260584/1‑116 (MQ=255) ggCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGcc < 5:314958/148‑1 (MQ=255) gCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCt < 1:166311/149‑1 (MQ=255) gTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCatat < 4:67088/149‑1 (MQ=255) tttaaTGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATg > 3:103308/4‑149 (MQ=255) ttAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATg < 7:15360/149‑1 (MQ=255) ttAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATg > 8:15360/1‑149 (MQ=255) gACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAAc < 1:341709/148‑1 (MQ=255) gACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACg > 2:133291/1‑149 (MQ=255) ttCAACGACATGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACt > 4:239473/1‑149 (MQ=255) tCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACt > 3:222458/1‑148 (MQ=255) cAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGa > 1:43861/1‑149 (MQ=255) cGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGc < 2:77091/131‑1 (MQ=255) cGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGc > 1:77091/1‑131 (MQ=255) cGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATcc < 4:120346/149‑1 (MQ=255) ttGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAatg < 3:133669/149‑1 (MQ=255) cgcTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAatgatg < 3:255074/149‑1 (MQ=255) aaGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAatgat < 8:43182/143‑1 (MQ=255) aaGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAatgat > 7:43182/1‑143 (MQ=255) aaGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAgc < 3:239473/147‑1 (MQ=255) aGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCt < 4:188950/149‑1 (MQ=255) cTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAg > 1:252597/1‑149 (MQ=255) ttGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGc > 1:346510/1‑149 (MQ=255) gcGGCAAGTCACGGGAGTGATCAAGCCACCTGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCTGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGtt < 4:87231/148‑1 (MQ=255) ccGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGtt < 4:222458/149‑1 (MQ=255) tCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTa < 4:318067/142‑1 (MQ=255) tCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTa > 3:318067/1‑142 (MQ=255) tCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGcc > 4:69189/1‑149 (MQ=255) aCGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCtt < 2:43861/149‑1 (MQ=255) aCGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCtt > 7:70640/1‑149 (MQ=255) ggCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCtt > 2:278638/1‑147 (MQ=255) gATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGCGTGGTGCCCTGATCGCCCATATGAAGAACGTCGAACTGAACCTGGCCAATGATGAGCGCTGGAGCGGGCTGATACGTTACAACGCCTGCAGcaca > 8:313829/1‑145 (MQ=255) gATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTcc < 4:103308/148‑1 (MQ=255) ttccaGCCACCGGTAGCCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTcc > 1:50370/5‑147 (MQ=255) caGCCACCGGTAGCCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTcc > 6:211534/2‑144 (MQ=255) aCCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATgc < 2:346510/149‑1 (MQ=255) | TGCTGCGGTGGTTGTGGGTGGCCAGGTAGTCGGCCCGATCTTCTCGGCTGAGCGTGAGGTTAAATGGACCGACTTCAACGACCTGCATTGCGCTGAAGGCCTTGAGGCCGTTCGCCGGCAAGTCACGGCAGTGATCAAGCCACCGGCTACCGGTGGCTGGAAGGACATGCTGGCCAGGACTGAGAGTGGTGCCCTGATCGCCCATATGCAGAACGTCGAACTGATCCTGGCCAATGATGAGCGCTGGAGCGGGGTGATCGGTTACAACGCCTTCAGCTCCAAGATCATGC > NC_002947/3422664‑3422953 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |