| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,798,567 | G→C | 10.2% | A111A (GCC→GCG) | PP_3358 ← | hydroxycinnamoyl‑CoA hydratase‑lyase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,798,567 | 0 | G | C | 10.2% | 187.1 / 12.5 | 69 | A111A (GCC→GCG) | PP_3358 | hydroxycinnamoyl‑CoA hydratase‑lyase |
| Reads supporting (aligned to +/- strand): ref base G (32/30); new base C (3/4); total (35/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.13e-01 | |||||||||||
TCGGCCATGGCCTTGCTGACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGGTCCAGGACTCGCCG > NC_002947/3798421‑3798714 | tCGGCCATGGCCTTGCTGACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATgg < 7:309587/148‑1 (MQ=255)tCGGCCATGGCCTTGCTGACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGc > 5:329933/1‑149 (MQ=255) ccATGGCCTTGCTGACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGCAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATg > 3:296828/1‑149 (MQ=255) aTGGCCTTGCTGACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGt > 7:272129/1‑149 (MQ=255) ggCCTTGCTGACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCg > 8:68177/1‑149 (MQ=255) ccTTGCTGACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATCGCCATGGTcaac < 2:200547/149‑4 (MQ=255) gCTGACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTg < 6:329933/148‑1 (MQ=255) gCTGACCAGGTTACCAGGCGGGATGCCCCAGTTGAGTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGttt < 6:199103/147‑1 (MQ=255) cTGACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGc < 7:9224/149‑1 (MQ=255) gACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCa > 7:225140/1‑148 (MQ=255) gACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCa > 1:9046/1‑148 (MQ=255) aCCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑a < 4:46073/149‑1 (MQ=255) ggCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCaa > 3:119711/1‑149 (MQ=255) aTGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTcca < 7:68177/149‑1 (MQ=255) gCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGc > 2:168964/1‑126 (MQ=255) gCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGc < 1:168964/126‑1 (MQ=255) cccAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTccatt > 4:273968/1‑147 (MQ=255) cccAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTccatt < 3:273968/147‑1 (MQ=255) ccAGTTGATTTACGACAGGCCGAAGGTCGCTTCTTTCGCGCAGAACGCCAGGACGCATCACACCACTGCGCTGAAGACGCCGCCGAAGCACCAGCCGTTGACCATGGCTATGGTAGGATTga > 6:263012/1‑121 (MQ=255) cAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTccattgc < 5:371368/147‑1 (MQ=255) cAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTccattgc > 6:371368/1‑147 (MQ=255) gTTTATGTCCGACCGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTccattgccatt < 4:296828/149‑1 (MQ=255) aTTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGa < 4:119711/149‑1 (MQ=255) ttCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATgg < 4:99704/98‑1 (MQ=255) ttCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATgg > 1:78706/1‑98 (MQ=255) ttCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATgg > 3:99704/1‑98 (MQ=255) ttCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATgg < 2:78706/98‑1 (MQ=255) cGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTg < 2:268463/109‑1 (MQ=255) cGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTg > 1:268463/1‑109 (MQ=255) cGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCtt < 7:142176/149‑1 (MQ=255) cGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATCGCCATGGt < 4:113547/102‑1 (MQ=255) cGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATCGCCATGGt > 3:113547/1‑102 (MQ=255) gACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGa > 3:184536/1‑143 (MQ=255) gACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGa < 4:184536/143‑1 (MQ=255) aCAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCCTGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTcg > 4:73399/1‑149 (MQ=255) ccGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGcgac > 8:269027/1‑148 (MQ=255) cGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGcgacg > 5:164076/1‑148 (MQ=255) gCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTc < 8:272129/149‑1 (MQ=255) cTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTcc > 3:353462/1‑149 (MQ=255) cGTTGGCGCAGATCGCCAGGTCGCCTGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTg < 3:73399/148‑1 (MQ=255) gTTGGCGCAGTTCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACTAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTgga < 7:265044/149‑1 (MQ=255) gcAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTggagga < 5:239374/146‑1 (MQ=255) gcAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTggagga > 6:239374/1‑146 (MQ=255) gcAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGAttt > 5:73968/1‑149 (MQ=255) cAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTc > 6:49561/1‑149 (MQ=255) cAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCgg > 4:77003/1‑149 (MQ=255) ggTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTggagg > 4:232412/1‑134 (MQ=255) ggTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTggagg < 3:232412/134‑1 (MQ=255) gTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGt > 2:307142/1‑149 (MQ=255) caccaGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTcgc > 5:260113/1‑149 (MQ=255) cccgTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTcgctg < 4:146552/146‑3 (MQ=255) gTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAg < 7:269027/149‑1 (MQ=255) aGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTc < 5:49561/149‑1 (MQ=255) ccgAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCATGACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTc > 1:252051/1‑120 (MQ=255) ccgAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTc < 2:252051/119‑1 (MQ=255) ccgAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCAt > 6:57342/1‑149 (MQ=255) gAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGc > 8:324266/1‑149 (MQ=255) gAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGc < 6:73968/149‑1 (MQ=255) aaGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGcc > 6:244674/1‑149 (MQ=255) aCCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCcggcg < 2:9046/149‑1 (MQ=255) ccAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCcgg < 2:333073/146‑1 (MQ=255) ccAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCcgg > 1:333073/1‑146 (MQ=255) cAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCcg > 6:320439/1‑144 (MQ=255) cAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCcg < 5:320439/144‑1 (MQ=255) aGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGGTc < 8:225140/149‑1 (MQ=255) gCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGGTc > 7:136015/1‑148 (MQ=255) aaaccgACCATCGCCATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGc < 2:44486/134‑1 (MQ=255) aaaccgACCATCGCCATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGc < 2:341430/134‑1 (MQ=255) aaaccgACCATCGCCATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGc > 1:44486/6‑139 (MQ=255) aaaccgACCATCGCCATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGc > 1:341430/6‑139 (MQ=255) ttGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGGTCCAGGa < 4:353462/149‑1 (MQ=255) gACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGGTCCAGGAc < 5:244674/148‑1 (MQ=255) cATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGAAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGGTCCAGGACTCGc > 8:50517/1‑149 (MQ=255) tGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGGTCCAGGACTCGCCg < 5:57342/149‑1 (MQ=255) | TCGGCCATGGCCTTGCTGACCAGGTTACCAGGCGGGATGCCCCAGTTGATTTCCGACAGGCCGAAGGTCGCTTCGTTGGCGCAGATCGCCAGGTCGCATGCCACCAGTGGGCTGAAGCCGCCGCCGAAGCACCAGCCGTTGACCATGGCGATGGTCGGTTTGGCAT‑ACAGACGCAGCAACTTCCATTGCCATTGCGAGGCTTCGCGACGAATCTTTTCCTGGAGGATTTCCGGGCCGGCGTCCACCTCGCGGAAGTACTCCTTCAGGTCCATGCCGGCGGTCCAGGACTCGCCG > NC_002947/3798421‑3798714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |