| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,908,416 | A→G | 5.6% | N122S (AAC→AGC) | PP_3450 → | TPR repeat‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,908,416 | 0 | A | G | 5.6% | 258.2 / 2.4 | 89 | N122S (AAC→AGC) | PP_3450 | TPR repeat‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (42/41); new base G (3/2); total (46/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGACACAGGCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGAGC > NC_002947/3908273‑3908564 | cGACACAGGCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACcgcg > 5:299912/1‑149 (MQ=255)cGACACAGGCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACcgcg > 8:335720/1‑149 (MQ=255) aGGCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACcgc < 6:122426/142‑1 (MQ=255) aGGCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACcgc > 5:122426/1‑142 (MQ=255) gcctgccCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGcc > 2:202721/1‑149 (MQ=255) cccAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccaccac < 5:369493/149‑1 (MQ=255) cccAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccaccac > 1:350153/1‑149 (MQ=255) ccAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccaccacc < 6:299912/149‑1 (MQ=255) ccAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGCGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCACCGGCCAACCAGACGCGGCTGGCCCTGGACAACCGCCCCATTGCCCTCGGccaccac > 4:126968/1‑148 (MQ=255) cAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGccaccacca > 5:30521/1‑149 (MQ=255) cTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAgg < 8:305981/149‑1 (MQ=255) tGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGTTGGCCATGGCCAGCcgcgtctg < 7:203563/125‑5 (MQ=255) tGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGTTGGCCATGGCCAGCcgcgtctg > 8:203563/1‑121 (MQ=255) tGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGc > 4:106499/1‑149 (MQ=255) tGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGc > 8:30899/1‑149 (MQ=255) gCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGccc < 6:30521/149‑1 (MQ=255) gCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGcc > 3:79741/1‑148 (MQ=255) aaCGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCaa > 8:137977/1‑149 (MQ=255) aaCGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCACCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCAGCCACCCCCAGCAGGCCCaa > 3:86138/1‑149 (MQ=255) gCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgc < 7:335720/149‑1 (MQ=255) gCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctggc‑‑t > 2:168707/1‑149 (MQ=255) gCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctgg < 4:34358/147‑1 (MQ=255) gCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctgg < 3:201026/147‑1 (MQ=255) ccAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctggc‑‑tg < 2:350153/149‑1 (MQ=255) ccAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctggc‑‑tg < 4:79741/149‑1 (MQ=255) cAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTTGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGc > 4:259536/1‑149 (MQ=255) aaTGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCa < 1:187422/149‑1 (MQ=255) tGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGt > 7:208671/1‑149 (MQ=255) cTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGc < 1:168707/149‑1 (MQ=255) atCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTTGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTAcc < 3:259536/149‑1 (MQ=255) ccAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACAGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGc > 6:218357/1‑149 (MQ=255) gCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCt > 7:294921/1‑148 (MQ=255) aaGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACgctggc < 2:175992/129‑1 (MQ=255) gaAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTgc > 5:351232/1‑148 (MQ=255) gaAAAGGCCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTgc < 6:351232/148‑1 (MQ=255) ccTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTgca < 5:37932/141‑1 (MQ=255) ccTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTgca > 6:37932/1‑141 (MQ=255) ccTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTgc > 5:298377/1‑140 (MQ=255) ccTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTgc < 6:298377/140‑1 (MQ=255) gACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGTCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGag > 6:39287/1‑148 (MQ=255) aCTGCGCTGCTGGCGCACGCCCCCTCGCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCTGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGagc < 3:126968/148‑1 (MQ=255) aCTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCACCCGCGCCAAAGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGag > 8:280738/1‑147 (MQ=255) aCTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGag < 1:202721/147‑1 (MQ=255) tGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGTTGGCCATGGCCAGCcgc < 3:357505/67‑1 (MQ=255) tGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGTTGGCCATGGCCAGCcgc > 4:357505/1‑67 (MQ=255) tGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGagcagc > 1:165045/1‑149 (MQ=255) ctgctgGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGTCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCa < 5:39287/149‑1 (MQ=255) gctgGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAg > 3:353177/1‑148 (MQ=255) ctgGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAgcg < 2:259586/143‑1 (MQ=255) ctgGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAgcg > 1:259586/1‑143 (MQ=255) tgGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCaa > 1:142052/1‑149 (MQ=255) gCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCCGGCCCAACGCTGCC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCACCAACt > 5:74364/1‑149 (MQ=255) gCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACt < 7:30899/149‑1 (MQ=255) tcccGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGAGCCATTGCCGTAGGCCACCCCCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCTAGCAGCGCCAGCAACttt < 5:214320/146‑1 (MQ=255) ccACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACttt > 4:192926/1‑149 (MQ=255) ccACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACttt > 3:231892/1‑149 (MQ=255) cACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAAc < 7:318050/118‑1 (MQ=255) cACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTg < 3:192926/149‑1 (MQ=255) cACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCCGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCACGCCCCACGCTCGC‑‑AGCAGTCGCTACCGCCAGATCAAc > 8:318050/1‑118 (MQ=255) aCGCCCCCTCCCCCGCAGCGGCCAACCCGACGCGGCTGGCCATGGCCAAACGCGCCCTTGCCGGCGGACCCCACCCGACGGCCCACCGCAGGC‑‑TGCCGTCGCAACCGCCTGCTCAACGCCAGCCACCCGCGCCCCCCCAGccaagtg > 6:214320/1‑141 (MQ=255) aCGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTgg > 6:299464/1‑149 (MQ=255) aCGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTgg > 8:80222/1‑149 (MQ=255) cGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGc < 2:165045/149‑1 (MQ=255) ccccTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCTCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAAc > 1:230932/1‑149 (MQ=255) ccccTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAAc < 4:353177/149‑1 (MQ=255) ccTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTg < 5:218357/149‑1 (MQ=255) ccTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTg < 3:106499/149‑1 (MQ=255) cAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGaa < 2:230932/149‑1 (MQ=255) gCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAgg < 8:208671/149‑1 (MQ=255) gCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAgg < 7:137977/149‑1 (MQ=255) cGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGc > 2:341096/1‑149 (MQ=255) cGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGc > 2:346430/1‑149 (MQ=255) ccAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAg > 6:21725/1‑115 (MQ=255) ccAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAg < 5:21725/115‑1 (MQ=255) ccAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATg > 3:151745/1‑149 (MQ=255) aatggcgcgGTTGGCCATGGCCAGCCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATg > 3:33714/6‑149 (MQ=255) aGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCa < 7:80222/149‑1 (MQ=255) ggCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTg < 6:309581/149‑1 (MQ=255) cTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGCGATGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTg > 1:285104/1‑149 (MQ=255) tggccatggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTg > 8:264810/1‑149 (MQ=255) catggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTgcggc < 5:299464/149‑1 (MQ=255) atggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTgcggcg > 8:111361/1‑149 (MQ=255) tggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGgcgc < 1:341096/149‑1 (MQ=255) tggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGgcgc < 1:346430/149‑1 (MQ=255) ggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCaa < 6:175455/73‑1 (MQ=255) ggccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCaa > 5:175455/1‑73 (MQ=255) gccaACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCt > 5:218564/1‑149 (MQ=255) caACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCGCAAGGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGa < 6:74364/149‑1 (MQ=255) caACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGa < 5:16182/149‑1 (MQ=255) aaCCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGagc < 6:116875/85‑1 (MQ=255) aaCCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGagc > 5:116875/1‑85 (MQ=255) aaCCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGAg > 7:116511/1‑149 (MQ=255) aCCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGAGc < 2:285104/149‑1 (MQ=255) aCCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGAGc < 4:151745/149‑1 (MQ=255) | CGACACAGGCCAGTTGCCTGCCCAGGACTGGCAACGCCTGGCCAATGCCTATATCCAGCAAGTCGACGAAAAGGGCCTGACTGCGCTGCTGGCCCACGCCCCCTCCCCCGCAGCGGCCAACCAGACGCGGCTGGCCATGGCCAACCGCGCCATTGCCGTCGGCCACCACCAGCAGGCCCAACGCTGGC‑‑TGCAGTCGCTACCGCCTGATCAACTGCAGCAACCCGAGCAGCGCCAGCAACTTTGGCAACTGGCCCGCGAAGGCGACGATGCAGCGCTGGTGCGGCGCCTGAGC > NC_002947/3908273‑3908564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |