| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,989,982 | C→G | 5.2% | S89R (AGC→AGG) | PP_3516 → | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,989,982 | 0 | C | G | 5.2% | 240.5 / 2.2 | 74 | S89R (AGC→AGG) | PP_3516 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (31/39); new base G (2/2); total (33/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATGGCCACCTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGCTGCCCGAGCGTGCGCTCAAAGCCA > NC_002947/3989837‑3990130 | aTGGCCACCTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAg < 7:285171/149‑1 (MQ=255) tGGCCACCTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGGGAgg > 4:134561/1‑149 (MQ=255) tGGCCACCTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGGGAgg > 4:129364/1‑149 (MQ=255) gCCACCTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTg < 3:61031/149‑1 (MQ=255) ccACCTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTg > 6:159212/1‑148 (MQ=255) cACCTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCa > 7:279539/1‑149 (MQ=255) tccggCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCa < 2:61749/144‑1 (MQ=255) ccTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACt > 3:136661/1‑149 (MQ=255) ccTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACt > 3:85156/1‑149 (MQ=255) cTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACtt < 8:279539/149‑1 (MQ=255) cTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACtt < 3:296916/149‑1 (MQ=255) cAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGGGAGGTGCACTTTg < 3:129364/148‑1 (MQ=255) cAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGGGAGGTGCACTTTg < 3:134561/148‑1 (MQ=255) cAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACCCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACttt < 8:23323/147‑1 (MQ=255) gcgcTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAAc < 2:99119/149‑1 (MQ=255) tGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGa > 3:286254/1‑149 (MQ=255) gAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACg > 2:172635/1‑149 (MQ=255) tACGCCGAGCACGCCGCTCAGCCTGTCTCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGc > 7:9133/1‑148 (MQ=255) aCGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGcca > 4:301454/1‑149 (MQ=255) cgcTCAGCCTGTCGCGCCAGCGGTCCAGCCAGCTCGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTg > 4:141521/1‑148 (MQ=255) gCCTGTCGAGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCTAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGccct < 8:223604/149‑2 (MQ=255) ccTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCgg > 7:26450/1‑149 (MQ=255) ccTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCgg > 3:29841/1‑149 (MQ=255) tCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCg < 8:41727/148‑1 (MQ=255) cgcgCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGt < 3:204741/149‑1 (MQ=255) gcgcCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGtt > 2:77557/1‑149 (MQ=255) gcCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTc < 4:136661/149‑1 (MQ=255) ggTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCAtcgtc > 5:122910/1‑149 (MQ=255) gTCCAGCCAGCTGGGTTACTCACGCAGAAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCAtcgtc > 5:118168/1‑148 (MQ=255) tCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGa < 4:286254/149‑1 (MQ=255) cagccagcTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAgc < 8:9133/149‑1 (MQ=255) cTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATTGTCGAGCGCGGCGa > 5:142686/1‑149 (MQ=255) cTGGGTTACTCACGCAGAAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGa < 6:118168/149‑1 (MQ=255) ggTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGAt < 1:172635/147‑1 (MQ=255) ggTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGAt < 6:122910/147‑1 (MQ=255) gTTACTCACGCAGCAAAGCGCACATCTGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCa < 2:13735/149‑1 (MQ=255) ttACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGCCGCGCTCGACGATgaaa < 1:77557/149‑4 (MQ=255) aCTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCAccc > 6:91926/1‑149 (MQ=255) cTCACGCAGCAAAGGGCACATCGGCCAGGAGCATGAAGCGTTCTAGCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCAccc < 7:61931/148‑1 (MQ=255) tCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTg > 7:19036/1‑82 (MQ=255) tCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTg < 8:19036/82‑1 (MQ=255) tCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGcgcg > 5:187671/1‑136 (MQ=255) tCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGcgcg < 6:187671/136‑1 (MQ=255) tCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTa > 8:276302/1‑149 (MQ=255) aCGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTAcc > 8:228202/1‑149 (MQ=255) agcaAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAATTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCtt > 1:341777/1‑149 (MQ=255) aGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATTGTCGAGCGCGGCGATGCACCCTACCGCTTCCACt < 6:142686/149‑1 (MQ=255) cgcACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTAc > 6:153718/1‑149 (MQ=255) caTCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCa > 2:156843/1‑149 (MQ=255) aTCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCAc > 4:3111/1‑149 (MQ=255) cATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAATTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACtt < 2:341777/149‑1 (MQ=255) gAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTtgtg > 1:240068/1‑149 (MQ=255) aaGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTtgtg < 3:141521/148‑1 (MQ=255) aaGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTtgtg < 5:153718/148‑1 (MQ=255) aaGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTgg < 5:91926/149‑1 (MQ=255) aaGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTgg < 5:159212/149‑1 (MQ=255) aaGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTgg < 8:134755/149‑1 (MQ=255) aaGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTgg < 3:301454/149‑1 (MQ=255) gTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACCGTACGCAGAACGACTTGTGGGTGc < 7:228202/149‑1 (MQ=255) ttCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCt > 8:56528/1‑149 (MQ=255) cTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACt > 3:268268/1‑119 (MQ=255) cTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACt < 4:268268/119‑1 (MQ=255) ccTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGc < 1:156843/149‑1 (MQ=255) ccTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGc > 6:265720/1‑149 (MQ=255) gTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCa < 6:285227/118‑1 (MQ=255) gTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCa > 5:285227/1‑118 (MQ=255) gTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGCTGc < 8:26450/148‑1 (MQ=255) aCCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGCTGCCCGa < 3:3111/149‑1 (MQ=255) cGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGCTGCCCGAGc > 4:333467/1‑149 (MQ=255) cGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGCTGCCCGAGc < 4:29841/149‑1 (MQ=255) tGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGCTGCCCGAGCGt < 3:333467/149‑1 (MQ=255) gCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTgg < 6:334520/127‑1 (MQ=255) gCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTgg > 5:334520/1‑127 (MQ=255) gCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGGTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGCGGCCCGAGCGTgcgc < 1:281975/149‑1 (MQ=255) cGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGCTGCCCGAGCGTGCGCTCAAAGcc > 2:102251/1‑148 (MQ=255) cGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGCTGCCCGAGCGTGCGCTCAAAGCCa < 7:56528/149‑1 (MQ=255) | ATGGCCACCTGCAGCGCTGGAGTACGCCGAGCACGCCGCTCAGCCTGTCGCGCCTGCGGTCCAGCCAGCTGGGTTACTCACGCAGCAAAGCGCACATCGGCCAGGACCATGAAGCGTTCTACCTGGTGACCGTGCCGCATGGCAGCGAGGTGCACTTTGAACAGGACGGCCACCAGATCAGTTGCAGCCCGGGCGGTTTCATCGTCGAGCGCGGCGATGCACCCTACCGCTTCCACTACGGCACGCAGAACGACTTGTGGGTGCTCAAGCTGCCCGAGCGTGCGCTCAAAGCCA > NC_002947/3989837‑3990130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |