| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,998,306 | A→G | 9.0% | Q331R (CAA→CGA) | PP_3526 → | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,998,306 | 0 | A | G | 9.0% | 218.8 / 9.1 | 78 | Q331R (CAA→CGA) | PP_3526 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (32/39); new base G (4/3); total (36/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
TGGAGCTGCGCATCACCAAGAGCCGCCGGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCTCATCAGACAGGTCGAT > NC_002947/3998159‑3998453 | tGGAGCTGCGCATCACCAAGAGCCGCCGGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCaa > 2:60530/1‑149 (MQ=255) gAGCTGCGCATCACCAAGAGCCGCCGGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAAc < 5:337562/148‑1 (MQ=255) gAGCTGCGCATCACCAAGAGCCGCCGGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGGGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAAc < 1:209556/148‑1 (MQ=255) aGCTGCGGATAACCAAGAGCCGCCGGCTGCTGGAGTATTCCGTCCTGTCGGTGATGGAACTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTGGGCTACC‑CGCCGTCGCGCGAGCAACgg < 4:70975/149‑1 (MQ=255) gCTGCGCATCACCAAGAGCCGCCGGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGc < 8:296625/149‑1 (MQ=255) cgcATCACCAAGAGCCGCCGGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTg < 1:268404/147‑1 (MQ=255) gcATCACCAAGAGCCGCCGGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGc < 3:82860/149‑1 (MQ=255) ccAAGAGCCGCCGGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGa > 7:30565/1‑149 (MQ=255) gagCCGCCGGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGa < 5:250636/149‑1 (MQ=255) ccgGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCt > 2:363223/1‑149 (MQ=255) ggCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCttt < 8:30565/149‑1 (MQ=255) ctgctgCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGa < 1:60530/149‑1 (MQ=255) tgctgcAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGag < 1:132091/149‑1 (MQ=255) gctgcAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagc > 5:366592/1‑149 (MQ=255) gcAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagccag > 8:130983/1‑149 (MQ=255) cAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagtcagc > 7:139005/1‑149 (MQ=255) cAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagccagc > 5:40201/1‑149 (MQ=255) cAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagcca < 2:168907/147‑1 (MQ=255) aGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagccagcc > 8:162652/1‑149 (MQ=255) aGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagccagcc < 5:294017/149‑1 (MQ=255) ttCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagcca < 6:63129/142‑1 (MQ=255) ttCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagcca > 5:63129/1‑142 (MQ=255) ccGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGgcg > 3:188377/1‑149 (MQ=255) aCCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTc < 1:363223/149‑1 (MQ=255) cTGTCGGTTATGGAAGTGGCGGTGGCCTGGGGGTTTGGCTCGGTTGCGCACTTCATCAATTGCTATTCGGCGTATTTCGGCTACCTCGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTg < 1:256275/131‑1 (MQ=255) cTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTg > 2:256275/1‑130 (MQ=255) cTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGa < 8:63334/149‑1 (MQ=255) gTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCAGTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagccag < 8:70618/134‑1 (MQ=255) gTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGagccag > 7:70618/1‑134 (MQ=255) tGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAAtct > 2:318429/1‑149 (MQ=255) gATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAAtct > 8:280389/1‑148 (MQ=255) ggAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGAATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTCGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAgg > 4:295058/1‑149 (MQ=255) gTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACg < 3:358931/149‑1 (MQ=255) tGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGa < 7:130983/149‑1 (MQ=255) gCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGa < 7:162652/148‑1 (MQ=255) cTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCa > 3:158890/1‑75 (MQ=255) cTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCa < 4:158890/75‑1 (MQ=255) cGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTgg < 6:40201/148‑1 (MQ=255) cGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGa > 1:180320/1‑149 (MQ=255) gggTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGAt < 2:180320/149‑1 (MQ=255) ggTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCt < 3:259779/144‑1 (MQ=255) ggTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCt > 4:259779/1‑144 (MQ=255) tctcGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑AGCCGTTGCTCGCGCGACGGCgggt > 1:199072/1‑72 (MQ=25) tctcGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑AGCCGTTGCTCGCGCGACGGCgggt < 2:199072/73‑2 (MQ=25) gCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCAt > 2:2274/1‑149 (MQ=255) gCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATATCAGGTACGAGGCTAGAGCTGGATGTACCGCAACAACGAAt > 2:117414/1‑149 (MQ=255) aCTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATca < 6:366592/149‑1 (MQ=255) aCTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGAGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATca > 3:124454/1‑149 (MQ=255) cTTCAGCAAGTGCTATGCGGCGTATTTCGGCTAGC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTATGAGGCTCGAGCTGGATGTACCGCAACACCGCATcac < 1:241861/149‑1 (MQ=255) cAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATcaca < 4:188377/147‑1 (MQ=255) cAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATca > 8:307644/1‑145 (MQ=255) aaGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAg > 1:143202/1‑84 (MQ=255) aaGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAg < 2:143202/84‑1 (MQ=255) aaGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACAcc < 7:129272/135‑1 (MQ=255) aaGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACAcc > 8:129272/1‑135 (MQ=255) cTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGAGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCt < 4:124454/148‑1 (MQ=255) tATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCttt > 1:291713/1‑149 (MQ=255) gcgTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCAGGAAGTACCGCAACACCGCAACACAGATCATGGCATtgatgcg > 8:141451/1‑144 (MQ=255) gTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGgcg > 7:67342/1‑147 (MQ=255) tttCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCt > 5:116052/1‑149 (MQ=255) ttCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCtt > 5:91939/1‑149 (MQ=255) tCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTgg < 7:330122/101‑1 (MQ=255) tCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTgg > 8:330122/1‑101 (MQ=255) ggCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTAt > 6:311262/1‑149 (MQ=255) gCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTAtt < 1:318429/149‑1 (MQ=255) cTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTAttt < 6:283421/149‑1 (MQ=255) cc‑cGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGTCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGc < 8:139005/148‑1 (MQ=255) cc‑cGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTg < 5:265409/147‑1 (MQ=255) ccagccgTTGCTCGCGCGACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTAttt < 2:129092/143‑1 (MQ=255) ccagccgTTGCTCGCGCGACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTAtt < 6:315695/142‑1 (MQ=255) ccagccgTTGCTCGCGCGACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTAtt > 5:315695/4‑145 (MQ=255) ccagccgTTGCTCGCGCGACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTgaa > 1:129092/4‑147 (MQ=255) cgccgTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCtca < 8:67342/149‑1 (MQ=255) gccgTTGCTCGCGCGACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCtca > 7:196659/1‑148 (MQ=255) ccgTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCtcatc < 7:280389/149‑1 (MQ=255) ccgTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCtcatc < 1:2274/149‑1 (MQ=255) tCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCTCATCAGa < 3:295058/149‑1 (MQ=255) gcgAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCTCATCAGACAgg > 1:149162/1‑149 (MQ=255) gcgAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCTCATCAGACAgg > 6:268210/1‑149 (MQ=255) gAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCTCATCAGACAGGTc > 7:185022/1‑149 (MQ=255) cAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCTCATCAGACAGGTCGAt < 7:141451/149‑1 (MQ=255) | TGGAGCTGCGCATCACCAAGAGCCGCCGGCTGCTGCAGTATTCCGACCTGTCGGTGATGGAAGTGGCGGTGGCCTGCGGGTTTGTCTCGGTGTCGCACTTCAGCAAGTGCTATGCGGCGTATTTCGGCTACC‑CGCCGTCGCGCGAGCAACGGCTGGGCGAGTGACCGAGGCCCTTTGAGCCAGCCCAGGCGCTCGAGCAATCTCAGGTACGAGGCTCGAGCTGGATGTACCGCAACACCGCATCACAGATCATGGCTTTGTGGCGCAGCTTTATTTGCTCATCAGACAGGTCGAT > NC_002947/3998159‑3998453 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |