| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5818083 = | 31 (0.990) | 4 (0.140) | 4/274 | 3.8 | 13.5% | coding (77/687 nt) | PP_5094 | PLP binding domain‑containing protein |
| ? | NC_002947 | 5818107 = | 22 (0.740) | coding (101/687 nt) | PP_5094 | PLP binding domain‑containing protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGCCAGATCAAGGGCAAGTCGCTGAGGGCCTGCTGCTTTGTCAGTGCTTCCTGTAGGTAATTCTCCCCGAAGTCGTGCACACCGGCGGCATGGATCTCGCGGATAGCGCTGGCGGGCTTGGTCTTGCTCACGGCCAGCAACTGGACGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5818236‑5818083‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggccgTGAGCAAGACCAA‑‑GCC‑CGCCAGCGCTATCCGCGAGATCCATGCCGCCGGTGTGCACGACTTCGGGGAGAATTACCTACAGGAAGCACTGACAAAGCAGCAGGCCCTCAGCGACTTGCCCTTGATCTGGCACTTCATCGGCCCCATT > NC_002947/5818107‑5818252 TGCCAGATCAAGGGCAAGTCGCTGAGGGCCTGCTGCTTTGTCAGTGCTTCCTGTAGGTAATTCTCCCCGAAGTCGTGCACACCGGCGGCATGGATCTCGCGGATAGCGCTGGCGGGCTTGGTCTTGCTCACGGCCAGCAACTGGACGC < 2:74104/148‑1 GGATAGCGCTGGCGGGCTTGGTCTTGCTCACGGCCAGCAACTGGACGCTGGCCG‑GATCACGCCCGACTGCCTGGGCAGCGCTATCCGCGAGATCCATGCCGCCGGTGTGCACGACTTCGGGGAGAATTACCTACAGGAAGCACTGAC > 3:24363/1‑147 TCACGGCCAGCAACTGGACGCTGGCCGTGAGCAAGACCAA‑‑GCC‑CGCCAGCGCTATCCGCGAGATCCATGCCGCCGGTGTGCACGACTTCG > 8:160636/1‑90 CACGGCCAGCAACTGGACGCTGGCCGTGAGCAAGACCAA‑‑GCC‑CGCCAGCGCTATCCGCGAGATCCATGCCGCCGGTGTGCACGACTTCGG < 7:160636/90‑1 GGCCAGCAACTGGACGCTGGCCGTGAGCAAGACCAA‑‑GCC‑CGCCAGCGCTATCCGCGAGATCCATGCCGCCGGTGTGCACGACTTCGGGGAGAATTACCTACAGGAAGCACTGACAAAGCAGCAGGCCCTCAGCGACTTGCCATTGATC > 7:72455/1‑148 CCGTGAGCAAGACCAA‑‑GCC‑CGCCAGCGCTATCCGCGAGATCCATGCCGCCGGTGTGCACGACTTCGGGGAGAATTACCTACAGGAAGCACTGACAAAGCAGCAGGCCCTCAGCGACTTGCCCTTGATCTGGCACTTCATCGGCCCCAT < 1:110425/148‑1 CGTGAGCAAGACCAA‑‑GCC‑CGCCAGCGCTATCCGCGAGATCCATGCCGCCGGTGTGCACGACTTCGGGGAGAATTACCTACAGGAAGCACTGACAAATCAGCAGGCCCTCAGCGACTTGCCCTTGATCTGGCACTTCATCGGCCCCATT < 6:141440/148‑1 TGCCAGATCAAGGGCAAGTCGCTGAGGGCCTGCTGCTTTGTCAGTGCTTCCTGTAGGTAATTCTCCCCGAAGTCGTGCACACCGGCGGCATGGATCTCGCGGATAGCGCTGGCGGGCTTGGTCTTGCTCACGGCCAGCAACTGGACGCTGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5818236‑5818083‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggccgTGAGCAAGACCAA‑‑GCC‑CGCCAGCGCTATCCGCGAGATCCATGCCGCCGGTGTGCACGACTTCGGGGAGAATTACCTACAGGAAGCACTGACAAAGCAGCAGGCCCTCAGCGACTTGCCCTTGATCTGGCACTTCATCGGCCCCATT > NC_002947/5818107‑5818252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |