| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 1,499,480 | 2 bp→AC | intergenic (+57/‑106) | trpS → / → zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,499,480 | 0 | C | A | 100.0% | 47.0 / NA | 20 | intergenic (+57/‑107) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (7/13); total (7/13) | |||||||||||
| * | NC_002947 | 1,499,481 | 0 | A | C | 100.0% | 53.2 / NA | 20 | intergenic (+58/‑106) | trpS/zapE | tryptophan‑‑tRNA ligase/nucleoside triphosphate hydrolase domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (7/13); total (7/13) | |||||||||||
ACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCCACGGCTTTGCCGGTGT‑T‑‑TCGGGCAC‑G‑CCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAA > NC_002947/1499341‑1499610 || aCGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCttt < 5:170900/148‑1 (MQ=255) gggCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGc < 5:73845/148‑1 (MQ=255) cGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGgt < 2:151630/148‑1 (MQ=255) aGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTTCCCGCCCAACACGCGCCGCGGTGCATGGCACCCGCGTTGCCGgtg > 6:40456/1‑146 (MQ=255) gACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGCAACCCGCGCCGCGGTGCATGGCACCCGCGTTGCCCGTGt‑tcgcgg > 3:38654/1‑143 (MQ=255) gACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGt‑tcgcg < 6:150036/147‑5 (MQ=255) tGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGGGCCCCCGAAACAGGCCCCGCGGGGCCTGGCACCGGCTTTGCCGGTGT‑TA‑GCGGGCCc‑g‑ccc > 8:127688/1‑147 (MQ=37) ttCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCACAC‑CCGCTCCCACAGACTGATTGcc < 1:140237/148‑1 (MQ=21) tGAACTCAGCCTTGGCACACCCGATGGACTGAGGCGGCCAATCGGTGGGATGGGGCGTGGCCGCGAAACAGGGGCCGCGGTGCATGCCACCGGCTTTGCCGTGGT‑TC‑TCGGGCAC‑GCCCGCTCCCACAGACTGATTGCCATTAAGCgg < 6:67059/148‑1 (MQ=16) gCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCAC‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACa < 5:84012/147‑1 (MQ=21) cacaGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCCTGCCCGCGAAACACGCGCCCCCGTGCATGGCACCCGCTTTTCCGGTGT‑TAGCCGGCCCC‑C‑CCCCTCCCCCAGACAGATTTGCAATAAGCGGGCCGATCGCTAAACTGAc > 6:33351/1‑148 (MQ=255) aCTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCTAAACAGGCGCCGCGGTGCAGGGCACCGGCTTTGCGGGTGT‑TC‑GCGGGCAC‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGttt < 6:142493/148‑1 (MQ=21) cTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCAC‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGtttt < 2:137893/148‑1 (MQ=21) gAGGCTGCCAAACGGGGGGAGCGGGCGTGCCCGCGAAACCGGCGCCGCGGTGCAGGGCACCGGCTTGGCCGGTGTGC‑‑GCGGGCAC‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGtttttt < 3:149412/148‑1 (MQ=21) ggCTGCCAAACGGGGGGAGCGGGCGGGCCCGCGAAACAGGCGCCGCGGTGCATGGCACCGGCGTTGCCGGTGTGC‑‑GCGGGCAC‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCCATCGCTACAGTGACGGCCCGTTTTttgt < 7:82742/148‑1 (MQ=21) gCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACCGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TA‑GCGGGCCC‑GCCCGCTGCCACAGACTGGTTGCCATTAAGCGGGGCTATCGCTACAGGGTCGGCCCGGTTTttgtt > 8:86563/1‑148 (MQ=18) gAAACAGGCGCCGCGGTGCATGGCACCGGCTGTGCCGGTGT‑TC‑GCGGGCAC‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGaa < 2:11529/148‑1 (MQ=37) cAGGCGCCGCGGTGCTTGGCACGGGCTTTGCGGGTGTGG‑‑GGGGGCAG‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCt < 1:103692/148‑1 (MQ=255) cAGGCGCCGCGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCAC‑GCCCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGGCCGGTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCt > 3:126301/1‑148 (MQ=37) ccgcGGTGCATGGCACCGGCTTTGCCGGTGT‑TC‑GCGGGCAC‑GCCCGCTCCCACAGCCTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCaa > 7:146959/1‑147 (MQ=37) || ACGGGCCGCAGTTCGACAACGCTGAAGCCCGTGATGCGGCCATTCAGAGCCTGAACGAAGCCTTGGCACCACAGCAGGACTGAGGCTGCCAAACGGTGGGAGCGGGCGTGCCCGCGAAACAGGCGCCGCGGTGCATGGCCACGGCTTTGCCGGTGT‑T‑‑TCGGGCAC‑G‑CCGCTCCCACAGACTGATTGCCATTAAGCGGGCCTATCGCTACAGTGACGGCCCGTTTTTTGTTGCCTCGCTAACGAATCATGACTCCCTTAGAACGCTATCAA > NC_002947/1499341‑1499610 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |