| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 278,744 | +A | intergenic (‑239/+75) | PP_0224 ← / ← sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 278,742 | 1 | . | A | 89.6% | 233.5 / 19.6 | 77 | intergenic (‑237/+77) | PP_0224/sctC | DszC family monooxygenase/sulfur compound ABC transporter ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (5/3); new base A (36/33); total (41/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑T‑A‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGC > NC_002947/278597‑278884 | gTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑T‑a‑aa > 8:205096/1‑148 (MQ=255)gTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAAATTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑T‑a‑aa > 7:270023/1‑148 (MQ=255) tCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑T‑a‑aac < 6:384273/149‑3 (MQ=255) tCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑T‑a‑aac < 2:157014/149‑3 (MQ=255) cTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑T‑A‑A‑acccg > 1:385901/1‑147 (MQ=255) cAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTc > 4:345885/1‑149 (MQ=255) cAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑T‑A‑A‑acccgatc > 4:81253/1‑144 (MQ=255) aGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTcc < 1:14832/149‑1 (MQ=255) aGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTcc > 5:382955/1‑149 (MQ=255) gCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCt < 6:353988/149‑1 (MQ=255) cTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTa < 4:278013/149‑1 (MQ=255) cgcgACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTacaca > 5:220536/1‑148 (MQ=255) aCGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTc > 1:42669/1‑148 (MQ=255) aCGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTc > 6:333009/1‑148 (MQ=255) gtgCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑ACCGCTACTACACACATGCCTCAAGa > 7:277249/1‑148 (MQ=255) cTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCt < 3:345885/148‑1 (MQ=255) cTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCt < 1:227115/148‑1 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTGCTACACACATGCCTCAAGATCtgtg > 6:4993/1‑148 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCtgtg > 8:127414/1‑148 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCtgtg < 1:357162/148‑1 (MQ=255) gtccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCtgtg < 3:380552/148‑1 (MQ=255) ccggtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCAc > 6:97865/1‑149 (MQ=255) gtggtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAATGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑T‑AGA‑CCCGCTCCTACAAACATACCTCAAGATCTGTGAACTg > 8:68160/1‑148 (MQ=255) gtccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTGCCCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTa < 1:330446/148‑1 (MQ=255) tccggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAg > 5:7663/1‑147 (MQ=255) cggtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGc < 5:158019/149‑1 (MQ=255) gtATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCgg < 2:385901/149‑1 (MQ=255) atataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGtt > 5:325508/1‑148 (MQ=255) atataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATATGTGCACTGTAGGAGCGGGtt > 1:5536/1‑148 (MQ=255) tataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTaca > 2:114073/1‑110 (MQ=255) tataCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTaca < 1:114073/110‑1 (MQ=255) taCCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTAc < 6:382955/148‑1 (MQ=255) cccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcg > 2:357682/1‑149 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCTATGTAGGAGctg > 6:297791/1‑137 (MQ=39) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCcgc > 6:186027/1‑149 (MQ=255) ccTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACACAGGTG‑CCGGTTTCTTCTCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAggctcgg < 5:297791/139‑6 (MQ=255) cTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCCAGATGTGTGCACGGTAGGAGCGGGGTTACCcgc > 6:245390/1‑148 (MQ=255) aaTGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACAAACATGCCTCAGGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGa > 3:316818/1‑148 (MQ=255) ttATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGGTT‑A‑A‑CCCGCTCGGACACCCATGCCGCAAGGTGTGGGCACTGTAGGAGCGGGTTTACCGGGGGAAggggc > 4:241376/1‑147 (MQ=255) aaaaaaTTTTTATCAATAAACTTTTTGTAAAATTTATATACGGGGTTTTTGTTACCTTTGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCTTACACACTTGCCTCATTATTTGTGCACTGTTGTAGCGGGTTTACCCGCGAAAGGGCCg < 8:270023/146‑1 (MQ=255) taAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCgg > 4:150950/1‑148 (MQ=255) aaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTacacac > 6:166056/1‑94 (MQ=255) aaaTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTacacac < 5:166056/94‑1 (MQ=255) aTTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAg < 5:97865/149‑1 (MQ=255) ttATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAGGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGtt < 4:316818/148‑1 (MQ=255) tATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATTCCTCAAGATCTGTTCACTGTAGGAGAGGGTTTACCCGCGAAAGGGCCGGAAAAGGttt > 5:244331/1‑148 (MQ=255) aTGAACTACCTTTTTGGAATATTTATAGACGGGGCATTTGTTACCGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCCCCTACACACATCCCTCAACATCTGTGCACTGTAGGCGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTa < 5:333009/148‑1 (MQ=37) actaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCg > 4:170781/1‑148 (MQ=255) ctaactTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGCAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGa < 3:81253/149‑1 (MQ=255) actTTTAGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑ACCGCTCCTACAACAATGCCTAAAGAAATTGGCACAGTAGGAGCGGCTTTTCCAGCGAAACGGCCGGAAc > 7:395320/1‑133 (MQ=255) ctTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTC‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGTAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGcc < 7:205096/149‑1 (MQ=255) tttGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGa < 2:51261/142‑1 (MQ=255) tttGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGa > 1:51261/1‑142 (MQ=255) ttATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCCAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAgg > 2:121668/1‑148 (MQ=255) ataGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑ACCCCGGCTAAACACAAGCCACAAGATATGTGCACAGTAGGAGCGGGGTTTCCCGCGCAAGGGCCCGAACACGTTTACAAGGAGGCCGCAGTCCCGACGaa > 2:151997/1‑148 (MQ=255) taGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACt < 6:325508/149‑1 (MQ=255) acgggggATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGGAA‑A‑A‑CCCGCTCCAACACACATGCCTCAAGATCTGCCCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgc < 5:4993/147‑1 (MQ=39) aaGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGGTT‑A‑A‑ACCCCGCCTAAACACAAGCCGAAAGATATGTGGACGGTAGGGGCGGGTTTTACCGCGAAAAGGGCGGGACAGGGTTTCTAGGCGGCCCCAGTGCCGAgggaagtgc > 8:351518/1‑142 (MQ=255) aaGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgc < 7:127414/149‑1 (MQ=255) gtttaTTTGTTACTTTGTTT‑CCGGTCTCTTCGTGGG‑T‑ATA‑GCAGATCCTACTCACATTCCTCAAGATCTGTGCACTGTAGGAGCGTGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTgcgc < 7:68160/144‑1 (MQ=255) gggATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCaa < 3:170781/149‑1 (MQ=255) gggATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTAGCGCaa < 2:5536/149‑1 (MQ=255) ttGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑ACCCCACCAACACACAATCCTCAATATATGTGGACTGTAGGAGCGGGGTTAACCCCGAAAAGGCCGGAACACGTTTAAAAGGAGGCCGCAGTCCCCAGGAACATGCGCAAAAACt > 2:178079/1‑149 (MQ=255) gTTACTGAGGGG‑CCGGGGTCTTGGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCACGATTTGTGCCCTGTTGGAGGGGTTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTg < 6:244331/148‑1 (MQ=255) gTTACAGCGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCg < 3:392427/113‑1 (MQ=255) gTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCGAAACACATGCCACAAGATATGTGCACTGTAGGAGCGGGTTTAACCCCGAAAGGGCCGGAACAGGGTTAATCg > 4:392427/1‑113 (MQ=37) aCAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgc > 5:353841/1‑149 (MQ=255) aCAGAGGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgc > 5:115777/1‑149 (MQ=255) agagTTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGt < 7:332974/65‑1 (MQ=25) agagGTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGGCGCAGTCCCGAGGAACTTGCGCAAGAACTGCcgcg > 5:405883/1‑148 (MQ=255) agagATG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGt > 8:332974/1‑65 (MQ=25) gTG‑CCGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACg < 6:115777/148‑1 (MQ=255) cGGGCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTctt > 4:136152/1‑149 (MQ=255) ggCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttcc < 6:220536/149‑1 (MQ=255) ggCTCTTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttcc < 6:7663/149‑1 (MQ=255) ctctTCGCGGT‑A‑A‑ACCCCGCACCAACACACATCCCACAAGATCTGTCCACTGTAGGAGCGGGTTAACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttcctt < 7:351518/149‑1 (MQ=255) ctctTCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTcttcctt < 2:42669/149‑1 (MQ=255) ttCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTGCTc < 7:304306/92‑1 (MQ=255) ttCGCGGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTGCTc > 8:304306/1‑92 (MQ=255) gcgGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGgcgc > 7:37378/1‑149 (MQ=255) gcgGG‑TAA‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGgcgc > 5:337620/1‑149 (MQ=255) | GTCGCTACAGCTGATCGCGACAGACGTGTGCTGGTCCGGTGGTCCGGTATATATACCCTAATGATTTATAAAATTTTTATGAACTAACTTTTTGGAATATTTATAGAAGGGGGATTTGTTACAGAGGTG‑CCGGGCTCTTCGCGGG‑T‑A‑A‑CCCGCTCCTACACACATGCCTCAAGATCTGTGCACTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGAACAGGTTTACTCGGAGGCCGCAGTCCCGAGGAACTTGCGCAAGAACTGCCGCGTACGCTCTTCCTTCGGCGC > NC_002947/278597‑278884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |