Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	171349–172965	176325–172967	3–4977	31 [29]	[28] 31	PP_16SA–[PP_5SA]	PP_16SA,PP_23SA,[PP_5SA]

CTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGC  >  NC_002947/171202‑171409                                                                                                                                                    |                                                              ctTAACCAAACGCTCTTTAACAGATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGt                                                             >  7:65749/1‑149 (MQ=17) ctTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGt                                                             >  2:408440/1‑149 (MQ=32)  ttAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAgg                                                               <  4:4619/146‑1 (MQ=32)  ttAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAgg                                                               >  3:4619/1‑146 (MQ=32)     aCCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTc                                                          <  1:408440/148‑1 (MQ=32)       cAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCtt                                                        >  1:419326/1‑148 (MQ=32)        aaaCGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTa                                                       >  6:334602/1‑148 (MQ=32)           cGCTCTTTAACAAATAGAATCAAACAAATCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGACTTATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTaaaa                                                    <  1:121964/149‑1 (MQ=11)                    aCAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATAATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAg                                          >  1:123285/1‑149 (MQ=17)                        aTCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTaaaaa                                                   <  4:96765/136‑1 (MQ=32)                        aTCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTaaaaa                                                   >  3:96765/1‑136 (MQ=32)                        aTCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTAtt                                      <  2:69786/149‑1 (MQ=32)                        aTCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGATGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTAtt                                      >  8:329067/1‑149 (MQ=17)                           gAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGa                                    >  2:212714/1‑148 (MQ=32)                              tCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTg                                <  3:175758/149‑1 (MQ=32)                                aaGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGaa                              <  1:212714/149‑1 (MQ=32)                                aaGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGaa                              >  1:76613/1‑149 (MQ=32)                                 aGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTg                                >  4:44475/1‑146 (MQ=32)                                  gCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAaga                            <  4:49860/149‑1 (MQ=32)                                    aaTTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGt                          <  7:156105/149‑1 (MQ=32)                                      ttCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGttt                        <  2:123285/149‑1 (MQ=32)                                          tgtgGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATc                    <  3:132307/149‑1 (MQ=32)                                            tgGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCAt                  <  1:292355/149‑1 (MQ=32)                                             gggTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATg                 >  4:8425/1‑149 (MQ=32)                                                tGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGc               >  1:202112/1‑148 (MQ=32)                                                  cTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCt              >  4:26497/1‑147 (MQ=32)                                                        aGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTg       <  2:419326/148‑1 (MQ=32)                                                          tATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAAc    <  3:44475/149‑1 (MQ=32)                                                          tATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAAc    <  3:26497/149‑1 (MQ=32)                                                           aTGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAAc    <  4:220252/148‑1 (MQ=31)                                                            tGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGc  >  6:216436/1‑149 (MQ=11)                                                                                                                                                    |                                                              CTTAACCAAACGCTCTTTAACAAATCGAATCAAGCAATTCGTGTGGGTGCTTGTGAGTATGGACTGATAGTCAAAAAGATTATCAGCATCACAAGTGAC‑CATGCGAGAAATCACATAGTCATTTGAGATTGCTGAGCCAAGTTTAGGGTTTCTTAAAAACCCAAGCAGTATTGAACTGAAGAGTTTGATCATGGCTCAGATTGAACGC  >  NC_002947/171202‑171409

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑