| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 4,740,811 | (T)7→6 | intergenic (+48/+705) | gltA → / ← yeiW | citrate synthase/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,740,805 | 0 | T | . | 92.2% | 246.3 / 18.7 | 66 | intergenic (+42/+711) | gltA/yeiW | citrate synthase/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (2/3); new base . (29/30); total (32/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCACTGGAAAGAAATGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCTTTTTTTATTTTTCTGGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGC > NC_002947/4740657‑4740949 | cGCACTGGAAAGAAATGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCt > 5:228334/1‑149 (MQ=255) aCTGGAAAGAAATGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCtttt < 1:342922/149‑1 (MQ=255) cTGGAAAGAAATGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAAAAGGCT‑GCCCGAGGGCAGCcttctt < 4:258418/149‑1 (MQ=255) gaaagaaaTGCTCTCCAGCCCGTTCAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCtttttta < 5:115692/148‑2 (MQ=255) gaaagaaaTGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCtttttta < 6:387704/148‑2 (MQ=255) gaaagaaaTGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCtttttt > 2:328390/1‑147 (MQ=255) gaaagaaaTGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCtttttt < 2:143503/147‑1 (MQ=255) gaaagaaaTGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCtttttt < 1:328390/147‑1 (MQ=255) aaagaaaTGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCttttttatt > 1:144851/1‑146 (MQ=255) aagaaaTGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCttttttattt < 1:28579/149‑5 (MQ=255) agaaaTGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAACTAAGCTGCAGTAGCCGAACGCAAGAAGGCTAGCCCTCGGGCAGCCttttttattt < 7:244860/149‑5 (MQ=255) ccAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCgg > 3:233017/1‑149 (MQ=255) ccGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCctct > 2:89150/1‑149 (MQ=255) aGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGc < 1:304479/149‑1 (MQ=255) aTCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCt > 7:218000/1‑149 (MQ=255) ccGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCtt < 4:204111/148‑1 (MQ=255) ccGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGccc < 7:319154/149‑1 (MQ=255) gTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCcgc < 4:148044/149‑1 (MQ=255) tCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCcgc > 4:77593/1‑148 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTcgcg < 4:227895/134‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTcgcg > 3:227895/1‑134 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAag < 8:213199/149‑1 (MQ=255) gcgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCACTTAGCGGGCGTGCCCCCGat > 7:217651/1‑147 (MQ=255) cgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 5:304754/149‑1 (MQ=38) cgcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 8:331518/149‑1 (MQ=255) cgcCAGCTGGACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 7:327353/149‑1 (MQ=255) gcCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGGCAAGGCCGCGAagag < 5:192037/149‑1 (MQ=38) cAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGc < 2:144851/149‑1 (MQ=255) cAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCCGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGc < 7:101430/149‑1 (MQ=255) aGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGcc < 1:30503/149‑1 (MQ=255) gCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGa > 8:129195/1‑141 (MQ=255) gCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGa < 7:129195/141‑1 (MQ=255) gCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCg < 1:89150/149‑1 (MQ=255) gCTGTACACCGGCGAGCACAAGCGCGACATCGTTCCCCTGAAAGACCCCAAGTACGCTGCAGTACCCGAACCCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCg < 6:228334/149‑1 (MQ=255) gCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCtttttt > 4:274988/1‑91 (MQ=255) gCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCtttttt < 3:274988/91‑1 (MQ=255) gAAGCGCGACATCGTTGCCCTTAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCTAATAGGCCGGCACAGACACCACAAAAc < 2:237278/149‑1 (MQ=255) gAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGTCGGCCTCATAGCGGCCATGCCCGCGAAGCGGACGGCACACACACCACAAAAc > 3:156044/1‑149 (MQ=255) aaGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa > 8:165757/1‑123 (MQ=255) aaGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGaa < 7:165757/123‑1 (MQ=255) aTCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGcaca > 1:46300/1‑126 (MQ=39) aTCGTTGCCCTCAACCCCCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGGT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGGGCCGGCCTCTTCGCGGCCTGGCCCGCTAAGAGGCCGGcaca < 2:46300/126‑1 (MQ=255) cGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 1:346061/114‑1 (MQ=255) cGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga > 2:346061/1‑114 (MQ=255) gTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTtctc > 1:351230/1‑149 (MQ=255) cTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGGCTCTTACCGGCCGTGCGCGGGGAGAGGCCGGGCCCGCCCCCACAAAAACGCAGTTTTTATacgcccc > 1:185124/1‑148 (MQ=255) tGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTccgcccgc > 4:59581/1‑149 (MQ=255) tGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAG‑CATTTTTTATTTGTCCTATGCCGGCCAATTCCCGGCCAACCACGCAAAGAGTACCGCACACACACCACAAAAAAACAGTTTTTATacgcaca > 4:149888/1‑145 (MQ=255) aaaGCCCCCAACTAAGCTGCAGTAGCCGAACGCAACAAGGCT‑CCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGCCCTTGCCCGCTAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTccgcccgc < 8:218000/147‑1 (MQ=255) aaaGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTAATCGAGGCCTTGCCCGCGAAGAGGCCGCCTCAGCCACCCCAAAACCTCAGTTTTTATccgcccgcg > 3:238174/1‑147 (MQ=255) aaGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTAGCGGCCTTGCCCGCGAAGAGGCCCGCACAGCCACCACAAAACCTCCGTTTTTCTCCCCCCGCGCa > 4:350524/1‑149 (MQ=255) gACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCCGCCTTGCCCGCCAAAAGGCCGGCACAGCCACCACAAAACCTCAGATTTTATCCGCCCGCACACg > 4:92107/1‑149 (MQ=255) ccgctctgCCGAACGCACTAAGGCT‑GCCCTCGGGCAG‑CGTTTTTTATTTGCCCTGGGCCGGCGTCTTCGCGGCCTGGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAgg < 3:42110/141‑1 (MQ=255) cAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga < 6:322691/85‑1 (MQ=38) cAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAaga > 5:322691/1‑85 (MQ=38) aGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTAt < 3:59581/149‑1 (MQ=255) ccGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCGTGCCCGCGAAGAGGCCGGCCCAGCCACCACAACACCACCGTTTTTATCCGCCCCCGCACCCCGCCCTGTCAgggagaacgg > 4:42110/1‑141 (MQ=255) ccGAACCCATGAAGGCT‑GCCGTCGGGCAGCCTTTTTTT‑TTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAAc < 3:329876/149‑1 (MQ=255) cgaacgaacgaaGGCT‑GCCGTCTGGAAGAC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTGGCCGGCGAAGTGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACg < 4:238174/149‑1 (MQ=255) cGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACg > 7:371469/1‑149 (MQ=255) cGAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACg < 3:77593/149‑1 (MQ=255) gAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACgg < 1:110686/149‑1 (MQ=255) gAACGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACgg > 3:116797/1‑149 (MQ=255) aaCGCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCGCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc > 6:290103/1‑149 (MQ=255) taaaaaagGCT‑GCCCGAGGGCAGCCTATTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTGTCCGCCCGCGCACGCAGCCCTTTCAGGGTATTGAACGgc > 1:4060/6‑147 (MQ=255) gCAAGAAGGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCGCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCa > 7:262654/1‑149 (MQ=255) aaaaaacggCT‑GCCCGAGGCCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTGGCCCGCCAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGgc < 2:4060/139‑1 (MQ=255) aagaagGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATc > 5:163602/1‑149 (MQ=255) gaagGCT‑GCCCTCGGGCAGCCTTTTTTATTTGTTCT‑GTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga < 4:281895/69‑1 (MQ=9) gaagGCT‑GCCCTCGGGCAGCCTTTTTTATTTGTTCT‑GTGCCGGCCTCTTCGCGGGCAAGGCCGCGAaga > 3:281895/1‑69 (MQ=9) aagGCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCACTTAGCGGCCATTGACGCGCAGAGGCCCGCAAACACACCAAAAAAACAAAGTTTTTATCCCCCCCCTCAACCACACCAGTTATGGTATTTAAAGGCGCATacaa > 8:317235/1‑148 (MQ=255) ggCT‑GCCCGTGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAATAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCTCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATccacca < 1:275277/149‑1 (MQ=255) ggCT‑GCCCGAGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCAAGCAGCCCATTCAGGGTATTGAACGGCGCATccacc > 2:275277/1‑148 (MQ=255) gCT‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACCGACCCCACAAAACCTCAGTTTTTCTCCGCCCGCGCCCGCAGCCCATTCAGGGTTTTGAACGGCGCATGcaccac > 7:354860/1‑149 (MQ=255) t‑GCCCTCGGGCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACg > 8:94895/1‑148 (MQ=255) gagggCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTAGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCAAAGTTTTTCTACGCCCGCTAACGCAGCCCGTTCAGGGTATTGAACGGCGCATCCACCACGAACatg > 4:332715/3‑149 (MQ=255) gggCAG‑CTTTTTTTATTTGTCCTGTGCCGGCCGCTTCGCGGCGTTCCCCGCTAATAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACttgtt < 3:167197/149‑1 (MQ=255) ggCAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACttgttg < 7:94895/149‑1 (MQ=255) cAGCC‑TTTTTTATTTGTCCTGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGc < 3:92107/149‑1 (MQ=255) | CGCACTGGAAAGAAATGCTCTCCAGCCCGTACAAGATCGGCCGTCCGCGCCAGCTGTACACCGGCGAGCAGAAGCGCGACATCGTTGCCCTGAAAGACCGCAAGTAAGCTGCAGTAGCCGAACGCAAGAAGGCT‑GCCCTCGGGCAGCCTTTTTTTATTTTTCTGGTGCCGGCCTCTTCGCGGCCTTGCCCGCGAAGAGGCCGGCACAGACACCACAAAACCTCAGTTTTTCTCCGCCCGCTCACGCAGCCCTTTCAGGGTATTGAACGGCGCATCCACCACGAACTTGTTGGC > NC_002947/4740657‑4740949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |