Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,282,775	0	G	C	27.4%	123.3 / 55.3	84	intergenic (‑167/+62)	PP_2010/PP_2011	cytochrome b561/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (31/30);  new base C (11/12);  total (42/42)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.56e-01
Rejected as consensus: Frequency below/above cutoff threshold.

GTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAG  >  NC_002947/2282628‑2282923                                                                                                                                                    |                                                                                                                                                     gTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACCGTCCAACTGCACAGTCTTgg                                                                                                                                                      >  8:306783/1‑148 (MQ=255)    tGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACCGACTTGGAAGc                                                                                                                                                  >  4:299532/1‑149 (MQ=255)    tGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGc                                                                                                                                                  >  4:294572/1‑149 (MQ=255)        tGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACCGTCCAACTGCGCAGTCTTGGAAGCCtgt                                                                                                                                              >  3:76388/1‑149 (MQ=255)        tGGCGCGCGTGCTGGCGGTCAGTAGTCATTTTAATGGCTACCGGCAACAGAGCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACGGGCCCCTTCGCGGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACtgt                                                                                                                                              <  6:309655/149‑1 (MQ=21)          gcgcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGc                                                                                                                                            <  5:89828/149‑1 (MQ=255)            gcTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAg                                                                                                                                          <  2:370977/149‑1 (MQ=255)             ctctTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGt                                                                                                                                         <  5:59217/149‑1 (MQ=255)              tctTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGtt                                                                                                                                        <  6:297643/149‑1 (MQ=255)              tctTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCGTGGAAGCCTGTGCAggt                                                                                                                                        >  6:35841/1‑147 (MQ=255)                ttGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGtt                                                                                                                                        <  4:15975/147‑1 (MQ=255)                      gcgcTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGTTGGACtgt                                                                                                                                 <  6:149850/148‑1 (MQ=255)                       cgcTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTgg                                                                                                                               <  4:296095/149‑1 (MQ=255)                          tCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACtgt                                                                                                                                              <  6:385106/131‑1 (MQ=255)                          tCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACtgt                                                                                                                                              >  5:385106/1‑131 (MQ=255)                              gAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGGGGGAGCggg                                                                                                                        >  4:331122/1‑149 (MQ=255)                              gAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACtgtg                                                                                                                                             >  1:75588/1‑128 (MQ=255)                              gAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACtgtg                                                                                                                                             <  2:75588/128‑1 (MQ=255)                               aGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCggg                                                                                                                        <  8:335596/148‑1 (MQ=255)                               aGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCGCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGc                                                                                                                       <  5:35841/149‑1 (MQ=255)                                   aTTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTCGCCTG‑CTCCGGCCCCTTCGCGGGCACGCCCGCGCCCACAGTCCAACTGCACAGGCGTGCAAGACTGTGGAGGTGGCCGGTGGGAGCGGGCGTGcg                                                                                                                  >  8:298839/1‑148 (MQ=17)                                       tAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGGAGGTGGGCTGTGGGAGCGGGCGTGCCcgc                                                                                                               >  2:291384/1‑149 (MQ=255)                                           ggCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAg                                                                                                           >  4:263854/1‑149 (MQ=255)                                            gCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAgg                                                                                                          >  1:229512/1‑149 (MQ=255)                                            gCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAgg                                                                                                          <  3:331122/149‑1 (MQ=255)                                            gCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCACCCTCCCACAGTCCAACAGCACAGTCATGGAAGACGGAGCCGTTGGAATCTGGGAGCGGGGGTGCCCGCGAAgg                                                                                                          >  8:354352/1‑149 (MQ=255)                                             cTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCAGCGAAgag                                                                                                         <  8:49414/149‑3 (MQ=17)                                              tACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAACCCTCTGCAGTTGGACTGTGGGAGCCGGCGTGCCCGCGAAgggg                                                                                                        >  1:231592/1‑149 (MQ=255)                                               aCCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGc                                                                                                       >  8:344158/1‑149 (MQ=255)                                                ccGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCGTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGcc                                                                                                      >  8:88250/1‑149 (MQ=255)                                                   gAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCg                                                                                                     >  8:17470/1‑147 (MQ=255)                                                     aaCAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAg                                                                                                  <  2:229512/148‑1 (MQ=255)                                                        aGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGc                                                                                                                                                  <  4:131361/97‑1 (MQ=255)                                                        aGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGc                                                                                                                                                  >  3:131361/1‑97 (MQ=255)                                                         gATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGc                                                                                             <  6:141407/149‑1 (MQ=255)                                                         cctCTTTGCGCCAGGTCTGTCAAAACTGTGCTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCACCTCCCCAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTTCCCGCGAAGGGGCCGGAGCAGGc                                                                                             <  7:306783/147‑1 (MQ=25)                                                                  gcCAGGTCTGTTAAAAATGTGTTGCCTGCCACCGGCCTCTTCGCTGGAAGGCCGGCTCCCACAGTCCAACTGCACAGGCTTCCAAGACtgtg                                                                                                                                             <  7:248124/92‑1 (MQ=17)                                                                  gcCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGa                                                                                                                             >  2:77514/1‑108 (MQ=255)                                                                  gcCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGa                                                                                                                             <  1:77514/108‑1 (MQ=255)                                                                  gcCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAggg                                                                                                         >  3:315778/1‑128 (MQ=255)                                                                  gcCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAggg                                                                                                         <  4:315778/128‑1 (MQ=255)                                                                   ccAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCGGTGCAGTTGGGGTGTGGGAGCGGGCGTGGCCGCGAGGGGGCCGGGGCAGGCGGCA‑CAGttt                                                                                  >  7:298839/1‑148 (MQ=25)                                                                    cAGGTCTGTGAAAAATGTGTTGCCAGCCCCCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACCGTCTTGGACGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTa                                                                                  <  3:103002/149‑1 (MQ=255)                                                                     aGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTAc                                                                                 <  7:88250/149‑1 (MQ=255)                                                                       gTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACCGTCCAACTGCACAGTGTTGGAAGCCTGTGCAGTTGGACTGTGGGCGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGCCATCAGTTACCg                                                                               >  5:151343/1‑149 (MQ=255)                                                                       gTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCg                                                                               <  1:291384/149‑1 (MQ=255)                                                                            tgAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCGGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGCGCAGGCGAGATCAGGTACCGGGCAg                                                                          >  7:253654/1‑149 (MQ=255)                                                                                aaaTGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAg                                                                      <  3:294572/149‑1 (MQ=255)                                                                                aaaTGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAg                                                                      <  3:299532/149‑1 (MQ=255)                                                                                     tgtTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCa                                                                 <  3:263854/149‑1 (MQ=255)                                                                                           cagccaCCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGGCTGTGGGAGCGGGCGTGCCCGCGGAGGGGCCGGAGCAGGGGAGCTCAGTTACCGGGCAGATAGGGCCAGtgat                                                            >  5:9404/1‑148 (MQ=25)                                                                                              ccaCCGGCCTCTTCGCTGGCACGCCCGCTCCCCCAGTCCAACTGCACAGTCGTGGAAGCCTGTGGAGTTGGGCTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGCGCAGGCGCCAGCAGTTACCGGGCAGATAGGGCCAGTCATcacc                                                        >  3:241939/1‑149 (MQ=25)                                                                                                     ccTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGc                                                                   <  2:51292/131‑1 (MQ=255)                                                                                                     ccTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGc                                                                   >  1:51292/1‑131 (MQ=255)                                                                                                      ccctTCGCGGGCACGCCCGCTCCCACAGTCCAACAGCACAGGCGTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGGGCCCGCGGAGGGGGCGGAGCAGGCGCCCTCAGTTACCCGGCAGCTAGGGGCAGTCAGCACCCCCCAgc                                                 >  8:90879/3‑147 (MQ=14)                                                                                                       tctTCGCTGGCACGCCCGCTCCCACAGTCCACCTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAg                                                                                               <  7:273343/101‑1 (MQ=255)                                                                                                       tctTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGCCTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGGCGATAGGGCCAGTCATCACCCACCAGaaa                                               >  5:274876/1‑149 (MQ=255)                                                                                                       tctTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAg                                                                                               >  8:273343/1‑101 (MQ=255)                                                                                                             cTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCg                                         <  7:17470/149‑1 (MQ=255)                                                                                                                gCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTc                                      <  7:344158/149‑1 (MQ=255)                                                                                                                   cGCCCGCTCCCACACTCCAACTGCGCAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGc                                   <  4:76388/149‑1 (MQ=255)                                                                                                                      ccGCTCCCACAGTCCAACTTCACAGTGTTGGATGCCTGTGCAGTTGGAGTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGcctc                                <  2:103676/149‑1 (MQ=255)                                                                                                                      ccGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGcctc                                >  5:151710/1‑149 (MQ=255)                                                                                                                      ccGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGcctc                                >  4:330938/1‑149 (MQ=255)                                                                                                                            ccACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCa                                                                 >  5:405306/1‑110 (MQ=255)                                                                                                                            ccACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCa                                                                 <  6:405306/110‑1 (MQ=255)                                                                                                                            caacaGTCAAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACAGTGGGAGCCCGCGTGCCCGCGAAGGGGCGGGAGCACGAGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACAACCGTTCAGCGACCTGc                            >  4:348086/3‑147 (MQ=255)                                                                                                                             cacaGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAg                         >  8:149037/1‑149 (MQ=255)                                                                                                                              acaGTCCAACTGCACAGTGTTGGACGCCTGCGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAgg                        <  3:348086/149‑1 (MQ=255)                                                                                                                                    cAACTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCAGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCAt                  >  1:366263/1‑149 (MQ=37)                                                                                                                                    cAACTGCACAGGCTTCCAAGACTGTGCAGTTGGACAGTGGGAGCGGGCGTCCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCACAACCACCCGTACTGCCTCCTGCCAGGCACCAt                  >  3:381989/1‑149 (MQ=25)                                                                                                                                     aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGa                                                 >  4:223654/1‑117 (MQ=25)                                                                                                                                     aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGa                                                 <  3:223654/117‑1 (MQ=25)                                                                                                                                     aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCt                                     >  8:162524/1‑129 (MQ=255)                                                                                                                                     aaCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCt                                     <  7:162524/129‑1 (MQ=255)                                                                                                                                      aCTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                <  1:240400/149‑1 (MQ=255)                                                                                                                                      aCTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                >  3:117473/1‑149 (MQ=255)                                                                                                                                        tGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTg                             >  3:98719/1‑134 (MQ=255)                                                                                                                                        tGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTg                             <  4:98719/134‑1 (MQ=255)                                                                                                                                          cacaGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCAt            >  1:101162/1‑149 (MQ=255)                                                                                                                                            ccggcTTGGACGCCTGGGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCa          <  4:241939/145‑1 (MQ=255)                                                                                                                                               tCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATc           >  4:244330/1‑145 (MQ=255)                                                                                                                                               tCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATc           <  3:244330/145‑1 (MQ=255)                                                                                                                                                 ttGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCa          >  5:126755/1‑144 (MQ=255)                                                                                                                                                 ttGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCa          <  6:126755/144‑1 (MQ=255)                                                                                                                                                   ggAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCAc     >  3:300873/1‑147 (MQ=255)                                                                                                                                                    gAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAg  >  8:45076/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     GTCTGAATGGCGCTCTTGCTGGCGCTCAGGAGTCATTTTAATGGCTACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAG  >  NC_002947/2282628‑2282923

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑