Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_002947 3,788,632 C→G M1M (ATG→ATC) † PP_3350 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,788,6320CG98.8% 274.1 / NA 80M1M (ATG→ATC) †PP_3350hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (35/44);  minor base T (0/1);  total (35/45)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCATCAAGCGTTCGCTAATCG  >  NC_002947/3788491‑3788775
                                                                                                                                             |                                                                                                                                               
gtcgAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGaa                                                                                                                                          <  1:241911/149‑1 (MQ=255)
 tcgAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAAt                                                                                                                                         >  3:361043/1‑149 (MQ=255)
 tcgAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAAt                                                                                                                                         >  4:59111/1‑149 (MQ=255)
     gaAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTcc                                                                                                                                     <  4:108258/149‑1 (MQ=255)
     gaAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTcc                                                                                                                                     <  1:367057/149‑1 (MQ=255)
     gaAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTcc                                                                                                                                     >  2:181658/1‑149 (MQ=255)
      aaaGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACTATGAGGGGCAGGCATACCCCCTTCAACGGCTTGATGATCAGAATTTccc                                                                                                                                    >  5:305160/1‑149 (MQ=255)
           ggTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCAc                                                                                                                               <  7:5188/149‑1 (MQ=255)
            gTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACt                                                                                                                              <  6:397640/149‑1 (MQ=255)
            gTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACt                                                                                                                              >  5:374339/1‑149 (MQ=255)
                  cTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGtttt                                                                                                                        >  3:168453/1‑149 (MQ=255)
                  cTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGtttt                                                                                                                        >  6:343333/1‑149 (MQ=255)
                   tCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGtttt                                                                                                                        >  8:99631/1‑148 (MQ=255)
                     gATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTta                                                                                                                      <  3:258696/148‑1 (MQ=255)
                          aGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGAtgatca                                                                                                                                             <  5:261224/120‑1 (MQ=255)
                          aGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGAtgatca                                                                                                                                             >  6:261224/1‑120 (MQ=255)
                          aGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTg                                                                                                                >  2:373732/1‑149 (MQ=255)
                           gCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGt                                                                                                               <  3:59111/149‑1 (MQ=255)
                            cGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGtt                                                                                                              <  5:265924/149‑1 (MQ=255)
                             gAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTc                                                                                                             <  5:339940/149‑1 (MQ=255)
                                gggCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCtt                                                                                                           >  4:86062/1‑148 (MQ=255)
                                 ggCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTAc                                                                                                         <  7:124066/149‑1 (MQ=255)
                                     ccTGGCCTCCCCGTCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAAc                                                                                                     <  6:267762/149‑1 (MQ=255)
                                      cTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACt                                                                                                    <  7:99631/149‑1 (MQ=255)
                                         gCCTACGCGGCCAGCCCGCTTGAAGAGAGCCGGCCGGGGAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGa                                                                                                 >  8:238479/1‑149 (MQ=37)
                                           ctacgcggccagcCCGCTTGAAGAGAGCCGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATATCCCTTCACGTGTTTTTATAATTGTTCTTACAAACTGGAt                                                                                                >  5:14842/6‑148 (MQ=37)
                                              cccGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCTCTTGTTTTTATAATTGTTCTTACAAACTGGATAAc                                                                                             >  3:26881/1‑148 (MQ=255)
                                              cccGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAACCTGGATAAct                                                                                            >  6:397564/1‑149 (MQ=255)
                                              cccGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAAct                                                                                            <  5:343333/149‑1 (MQ=255)
                                              cccGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAAct                                                                                            <  1:157024/149‑1 (MQ=255)
                                                cggccggcTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAActct                                                                                          >  2:27653/1‑149 (MQ=255)
                                                 ggccggcTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCTCTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTg                                                                                         <  4:26881/149‑1 (MQ=255)
                                                   ccggcTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGAt                                                                                                <  5:314307/140‑1 (MQ=255)
                                                   ccggcTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGAt                                                                                                >  6:314307/1‑140 (MQ=255)
                                                     ggcTCTCTTCAAGCTGTCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCATGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTaa                                                                                     <  7:152921/149‑1 (MQ=255)
                                                       ctctctTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACg                                                                                   <  1:373732/149‑1 (MQ=255)
                                                        tctgtTGAAGCGGGCTGGGCGCGTAGGCGGAATGGAACAGCGAAAGCACCCTGAGGGGCAGTCATACCCCGTTCAACGGGTTGATGATCTGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGa                                                                                  <  4:276823/149‑1 (MQ=255)
                                                        tctctTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGa                                                                                  >  1:47906/1‑149 (MQ=255)
                                                         cactTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGat                                                                                 >  8:336362/3‑149 (MQ=255)
                                                             tCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACATACTGGATAACTCTGTTAACGattatt                                                                             >  2:273326/1‑149 (MQ=255)
                                                              cAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGatta                                                                               <  4:168453/146‑1 (MQ=255)
                                                               aaGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTAtttt                                                                           <  1:236777/149‑1 (MQ=255)
                                                                aGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTAttttt                                                                          <  3:86062/149‑1 (MQ=255)
                                                                  cGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGt                                                                        <  6:374339/149‑1 (MQ=255)
                                                                  cGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGt                                                                        <  2:230994/149‑1 (MQ=255)
                                                                      cTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAAc                                                                    <  7:336362/149‑1 (MQ=255)
                                                                        ggCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTAttttt                                                                          <  4:186374/141‑1 (MQ=255)
                                                                        ggCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTAttttt                                                                          >  3:186374/1‑141 (MQ=255)
                                                                           cgcgTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCatat                                                               <  4:361043/149‑1 (MQ=255)
                                                                           cgcgTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGCCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCatat                                                               <  1:133511/149‑1 (MQ=255)
                                                                                 ggCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGcc                                                          <  6:76521/148‑1 (MQ=255)
                                                                                  gCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACACCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGt                                                        <  6:14842/149‑1 (MQ=255)
                                                                                            acaGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGtt                                              >  7:207063/1‑149 (MQ=255)
                                                                                            acaGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGtt                                              <  2:47906/149‑1 (MQ=255)
                                                                                            acaGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGtt                                              >  2:27175/1‑149 (MQ=255)
                                                                                               gCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTg                                           <  7:277254/149‑1 (MQ=255)
                                                                                               gCGAAACCACCATGAGGCGCAGGCAGACCCCGTTCAACGGCATGCTGATCAGAATTTCCCTTCACTTGTTTATAAAATTCTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGgttgg                                           <  6:330755/149‑3 (MQ=255)
                                                                                                 gAAATCAACATGAGGGTCAGGCATACCCCGTTACACGGCTTTATTATCACAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGcc                                         <  7:343947/149‑1 (MQ=255)
                                                                                                 gAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGc                                          <  7:238479/148‑1 (MQ=255)
                                                                                                   aaGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACATACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCg                                        <  1:273326/148‑1 (MQ=255)
                                                                                                    aGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCgtg                                      >  4:283085/1‑149 (MQ=255)
                                                                                                       aCCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTa                                    >  2:355452/1‑148 (MQ=255)
                                                                                                              ggggCAGGCATACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAAt                            <  3:283085/149‑1 (MQ=255)
                                                                                                                ggcaggcaTACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGa                          <  1:27175/149‑1 (MQ=255)
                                                                                                                  caggcaTACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGAt                         >  7:204309/1‑148 (MQ=255)
                                                                                                                   aggcaTACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGAt                         >  3:196217/1‑147 (MQ=255)
                                                                                                                        tACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCAt                   >  7:128547/1‑148 (MQ=255)
                                                                                                                        tACCCCGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCATc                  <  1:27653/149‑1 (MQ=255)
                                                                                                                           cccGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAg                                <  3:313753/132‑1 (MQ=255)
                                                                                                                           cccGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAg                                >  4:313753/1‑132 (MQ=255)
                                                                                                                           cccGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAGTGATCAGCATCAAg               >  4:282314/1‑149 (MQ=255)
                                                                                                                            ccGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCAt                   <  3:210569/144‑1 (MQ=255)
                                                                                                                            ccGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCAt                   >  4:210569/1‑144 (MQ=255)
                                                                                                                            ccGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCATCAAGc              <  8:128547/149‑1 (MQ=255)
                                                                                                                             cGTTCAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCATCAAGCg             >  2:204696/1‑149 (MQ=255)
                                                                                                                                 cAACGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCATCAAGCGTTc          <  5:159517/148‑1 (MQ=255)
                                                                                                                                  aaCGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCa                       >  2:71382/1‑134 (MQ=255)
                                                                                                                                  aaCGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCa                       <  1:71382/134‑1 (MQ=255)
                                                                                                                                   aCGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACaa                                 >  8:103864/1‑123 (MQ=255)
                                                                                                                                   aCGGCTTGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACaa                                 <  7:103864/123‑1 (MQ=255)
                                                                                                                                        ttGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCATCAAGCGTTCGCTAATCg  >  2:339749/1‑149 (MQ=255)
                                                                                                                                        ttGATGATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCATCAAGCGTTCGCTAATCg  >  7:159533/1‑149 (MQ=255)
                                                                                                                                             |                                                                                                                                               
GTCGAGAAAGCGGTAGTCCTCGATCCAGCGAGGGGCCCCTGGCCTCCCCGGCCGGCTCTCTTCAAGCGGGCTGGCCGCGTAGGCGGAATGGCACAGCGAAAGCACCATGAGGGGCAGGCATACCCCGTTCAACGGCTTGATCATCAGAATTTCCCTTCACTTGTTTTTATAATTGTTCTTACAAACTGGATAACTCTGTTAACGATTATTTTTGTTAACCATATGCGCCGTCAATAGCGTTTTGCCGTGTACAAGGAATGATCAGCATCAAGCGTTCGCTAATCG  >  NC_002947/3788491‑3788775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑