Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	6,013,885	T→C	intergenic (+90/+20)	xpt → / ← PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	6,013,885	0	T	C	100.0%	169.6 / NA	50	intergenic (+90/+20)	xpt/PP_5266	xanthine phosphoribosyltransferase/acetyl‑CoA hydrolase family protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (29/21);  total (29/21)

AATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATCC  >  NC_002947/6013740‑6014028                                                                                                                                                   |                                                                                                                                                aaTCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTGTCGAACGCTGTGGCGGA‑CCGGTGGGAGCGGGCGTGCCCGc                                                                                                                                               >  8:225090/1‑148 (MQ=38)         gCCCGGGTGAAGTCCCTGGAAGGTGGTGTGGGCAGCGTCATCGAATAAACCCGACACCTGCGTCGCGGGCACGCCCGCTCCCCCAGGGGCAGCACAGGGCGCGAACGCTGTGCCGTACCCTGTGGGAGCGGGCGTGCCCGCGAATGGcc                                                                                                                                       <  1:243871/149‑1 (MQ=37)                        cTGGACGGGGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTg                                                                                                                       <  5:101972/149‑1 (MQ=255)                                tggtgtggtCAGCTTCATCGAATACACGCGACTCCTGCTTCGCGGGCACGGCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTgccgc                                                                                                               <  3:290949/149‑1 (MQ=255)                                                aTCGATTAAACGCGACACCTGCTTCGCGGGCACGCCGGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCcaacaac                                                                                               <  6:24293/149‑1 (MQ=255)                                                                acCTGCTTCGCGGGCCCGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGtt                                                                               <  2:325510/149‑1 (MQ=255)                                                                        cgcgGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCttt                                                                        <  7:225090/148‑1 (MQ=255)                                                                               aCGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGGAAAGTTCTTCTTTAAGCCCCt                                                                >  3:259461/1‑149 (MQ=255)                                                                                   ccGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAg                                                                     >  5:328307/1‑140 (MQ=255)                                                                                   ccGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAg                                                                     <  6:328307/140‑1 (MQ=255)                                                                                   ccGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCgg                                                            >  6:234343/1‑149 (MQ=255)                                                                                       tCCCACAGGTACGGCACAGCGTTCGAGACCTGTGCTGCA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGc                                                        >  1:197933/1‑149 (MQ=21)                                                                                         ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAc                                                                                                                                  <  2:366378/73‑1 (MQ=255)                                                                                         ccACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAAc                                                                                                                                  >  1:366378/1‑73 (MQ=255)                                                                                          cacaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                      >  4:369629/1‑148 (MQ=255)                                                                                          cacaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGccc                                                      >  5:366485/1‑148 (MQ=255)                                                                                           acaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCt                                                                <  6:196451/137‑1 (MQ=255)                                                                                           acaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCt                                                                >  5:196451/1‑137 (MQ=255)                                                                                           acaGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGcccc                                                     >  4:369247/1‑148 (MQ=255)                                                                                            caGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCaa                                                   >  5:26624/1‑149 (MQ=255)                                                                                            caGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCaa                                                   <  5:234343/149‑1 (MQ=255)                                                                                             aGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGtt                                                                               >  4:264623/1‑120 (MQ=255)                                                                                             aGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGtt                                                                               >  4:269747/1‑120 (MQ=255)                                                                                             aGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGtt                                                                               <  3:269747/120‑1 (MQ=255)                                                                                             aGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGtt                                                                               <  3:264623/120‑1 (MQ=255)                                                                                               gTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTg                                                >  6:311353/1‑149 (MQ=255)                                                                                               gTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTg                                                >  2:160583/1‑149 (MQ=255)                                                                                                 gcagcaCAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCa                                              >  5:2604/1‑149 (MQ=255)                                                                                                     cacaGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCg                                          >  5:33578/1‑149 (MQ=255)                                                                                                        aGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGccc                                       >  7:196264/1‑149 (MQ=255)                                                                                                           tctcGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAg                                    <  1:150953/149‑1 (MQ=255)                                                                                                             tcGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGt                                  >  8:44100/1‑149 (MQ=255)                                                                                                             tcGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGt                                  >  7:219088/1‑149 (MQ=255)                                                                                                              cGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                              >  5:190111/1‑120 (MQ=255)                                                                                                              cGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGc                                                              <  6:190111/120‑1 (MQ=255)                                                                                                               gAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGccc                                       <  4:82458/142‑1 (MQ=255)                                                                                                               gAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGccc                                       >  3:82458/1‑142 (MQ=255)                                                                                                                      gtgCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCa                          >  6:302388/1‑148 (MQ=255)                                                                                                                       tgCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATa                        <  5:302388/149‑1 (MQ=255)                                                                                                                        gCCGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAc                       <  6:2604/149‑1 (MQ=255)                                                                                                                         ccGTA‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATAcc                      >  8:341193/1‑149 (MQ=255)                                                                                                                             a‑CCTGTGGGAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTc                  >  8:282076/1‑149 (MQ=255)                                                                                                                                     ttcgCGGGCCCGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCTCTCCGGcccc           >  1:139266/4‑149 (MQ=255)                                                                                                                                     ggAGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGcccc           >  5:234748/1‑149 (MQ=255)                                                                                                                                       aGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCgg         >  2:268215/1‑149 (MQ=255)                                                                                                                                       aGCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCgg         <  2:197933/149‑1 (MQ=255)                                                                                                                                        gCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGt        <  6:33578/149‑1 (MQ=255)                                                                                                                                        gCGGGCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGt        <  8:219088/149‑1 (MQ=255)                                                                                                                                            gCGTGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCAt    <  5:311353/149‑1 (MQ=255)                                                                                                                                               tGCCCGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATcc  >  2:116749/1‑148 (MQ=255)                                                                                                                                                   |                                                                                                                                                AATCGCTGGCCCGGGTGAAGTCGCTGGAAGGTGGTGTGGTCAGCTTCATCGAATAAACGCGACACCTGCTTCGCGGGCACGCCCGCTCCCACAGGTGCAGCACAGGTCTCGAACGCTGTGCCGTA‑CCTGTGGGAGCGGGCGTGCCTGCGAATGGCCGCAACCCTTTTATCTGGTTGCCGCCAGCCCCGCCAACAACAAGCGCTGGTAAAGTTCTTCTTTAAGCCCCTGCGGCTGCCCCAACTGCATCCGCCCCAGGTGGCTTTCATACCCCTCCGGCCCCGGTGCATCC  >  NC_002947/6013740‑6014028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑