| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 13986 | 56 (0.950) | 7 (0.130) | 6/240 | NT | 12.5% | coding (657/2421 nt) | gyrB | DNA gyrase subunit B |
| ? | NC_002947 | = 14012 | 46 (0.840) | coding (683/2421 nt) | gyrB | DNA gyrase subunit B | |||||
CCACATCCACTTCAAGCCATCGGCTGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/13830‑13986‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaagtacTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCCAGCTGAAGTGAATGTTC < NC_002947/14012‑13866 CCACATCCACTTCAAGCCATCGGCTGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCT > 4:199561/1‑149 ATCCACTTCAAGCCATCGGCTGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAA < 4:293793/149‑1 TCCACTTCAAGCCATCGGCTGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAG > 8:317633/1‑149 ACTTCAAGCCATCGGCTGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTAC > 7:38259/1‑149 ACTTCAAGCCATCGGCTGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTAC > 2:334426/1‑149 TTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTACTCGACGAACGCACGCAGACCGCC > 6:213766/1‑149 ACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTACTCGACGAACGCACGCAGACCGCCTTCGTAC > 4:2687/1‑149 ACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAA < 3:2687/148‑1 CTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGA < 6:36995/149‑1 CAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAA < 5:213766/147‑1 TCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAA > 6:370327/1‑133 TCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAA < 5:370327/133‑1 TTCAAGTACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCCAGCTGAAGT < 5:121617/148‑1 AAGTACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCCAGCTGAAGTGAAT < 1:40630/149‑1 AAGTACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCCAGCTGAAGTGAAT > 7:317633/1‑149 GTACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCCAGCTGAAGTGAAT < 6:139309/147‑1 GTACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCCAGCTGAAGTGAAT > 5:139309/1‑147 ACTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCCAGCTGAAGTGAATGTTC > 7:343141/1‑149 CTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCCAGCTGAAGTGAATGTTC < 4:274184/148‑1 CTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCC > 2:146066/1‑131 CTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCC < 1:146066/131‑1 CCACATCCACTTCAAGCCATCGGCTGAAACCTTCAAGAACATTCACTTCAGCTGGGACATCCTGGCCAAGCGCATCCGCGAGCTGTCGTTCCTCAACTCGGGCGTTGGCATTCTGCTGAAGGATGAGCGCAGCGGTAAGGAAGAGTTCTTCAAGTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/13830‑13986‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcaagtacTCGACGAACGCACGCAGACCGCCTTCGTACTTGAAGAACTCTTCCTTACCGCTGCGCTCATCCTTCAGCAGAATGCCAACGCCCGAGTTGAGGAACGACAGCTCGCGGATGCGCTTGGCCAGGATGTCCCAGCTGAAGTGAATGTTC < NC_002947/14012‑13866 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |