New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 70234	51 (0.870)	4 (0.070)	4/242	NT	7.2%	coding (1671/2055 nt)	glyS	glycine‑tRNA ligase subunit beta
	?	NC_002947	= 70267	55 (1.000)					coding (1638/2055 nt)	glyS	glycine‑tRNA ligase subunit beta

GGGAGAACTCGTTGGCATTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/70080‑70234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacgcgcACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCCGAGCA  <  NC_002947/70267‑70121                                                                                                                                                                                                                                                                                                                GGGAGAACTCGTTGGCATTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCGGTTTGCGGAACGCCTGCACGGCTTGT                                                                                                                                                           <  1:10718/149‑1   GAGAACTCGTTGGCATTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTAC                                                                                                                                                         <  5:104619/149‑1                  TTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGT                                                                                                                                                           >  3:33284/1‑132                  TTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGT                                                                                                                                                           <  4:33284/132‑1                                      GACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGAC                                                                                                                      >  2:253001/1‑149                                          TGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGC                                                                                                                  >  6:122642/1‑149                                                  GATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAA                                                                                                          <  5:122642/149‑1                                                   ATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAG                                                                                                         <  1:253001/149‑1                                                                                                                                                     TACGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCC       >  5:40474/1‑149                                                                                                                                                       CGCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTACTGAGCAAGGCCGAAGGAGCCATCGCCGA     >  8:242555/1‑149                                                                                                                                                        GCGCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAA                   <  8:63358/134‑1                                                                                                                                                          GCACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTACTGAGCAAGGCCGAAGGAGCCATCGCCGAGCA  <  7:242555/149‑1                                                                                                                                                                                                                                                                                                                GGGAGAACTCGTTGGCATTGTCGAAGTACTTCGGCTCGACCTGCTCGGCGATGGCTCCTTCGGCCTTGCTCAGCAGGTTCGACACGCGCTTGTTCACCGCGGCCAGGGCCTCGGCTTCCGGCAGTTTGCGGAACGCCTGCACGGCTTGTACGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/70080‑70234 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtacgcgcACTGCAGCCAGGCTCCGCCCTGGACTTCGACCAGCGCGTACAAGCCGTGCAGGCGTTCCGCAAACTGCCGGAAGCCGAGGCCCTGGCCGCGGTGAACAAGCGCGTGTCGAACCTGCTGAGCAAGGCCGAAGGAGCCATCGCCGAGCA  <  NC_002947/70267‑70121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.