New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	104207 =	63 (1.070)	4 (0.070)	4/248	NT	6.1%	coding (366/1059 nt)	PP_0099	hypothetical protein
	?	NC_002947	104260 =	62 (1.100)					coding (419/1059 nt)	PP_0099	hypothetical protein

GGTCGAGGTCGCGCAGCACCAGTGAACCCTTGGTGACAATGGTCACCGGGTGACGAAAACGCAGTAACACTTCGAGCAAGCGCCGGGTCAGTAACTGTTCGCGCTCGATCGGCTGGTACGGGTCGGTGTTGGAGCCCAGATTGATCGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/104358‑104207 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCGACCTCGACCTGCTGGCCGAGATGGCCCGCCAGCGCCTGGCACGGGTGATGAT  >  NC_002947/104260‑104401                                                                                                                                                                                                                                                                                                        GGTCGAGGTCGCGCAGCACCAGTGAACCCTTGGTGACAATGGTCACCGGGTGACGAAAACGCAGTAACACTTCGAGCAAGCGCCGGGTCAGTAACTGTTCGCGCTCGATCGGCTGGTACGGGTCGGTGTTGGAGCCCAGATTGATCGGC                                                                                                                                                   <  2:86338/149‑1   TCGAGGTCGCGCAGCACCAGTGAACCCTTGGTGACAATGGTCACCGGGTGACGAAAACGCAGTAACACTTCGAGCAAGCGCCGGGTCAGTAACTGTTCGCGCTCGATCGGCTGGTACGGGTCGGTGTTGGAGCCCAGATTGATCGGCGC                                                                                                                                                 >  8:245725/1‑149   TCGAGGTCGCGCAGCACCAGTGAACCCTTGGTGACAATGGTCACCGGGTGACGAAAACGCAGTAACACTTCGAGCAAGCGCCGGGTCAGTAACTGATGGCGCTCGATCGGCTGGTACGGGTCGGTGTTGGAGCCCAGATTGATCGGCGC                                                                                                                                                 <  5:260517/149‑1     GAGGTCGCGCAGCACCAGTGAACCCATGGTGACAATGGTCACCGGGTGACGAAAACGCAGTAACACTACGAGCAAGCGCCGGGTCAGTAACTGTTCGCGCTCGATCCGCTGGTACGGGTCGGTGTTGGAGCCCACATTCATCGGCGCG                                                                                                                                                >  1:244047/1‑148                    CAGTGAACCCTTGGTGACAATGGTCACCGGGTGACGAAAACGCAGTAACACTTCGAGCAAGCGCCGGGTCAGTAACTGTTCGCGCTCGATCGGCTGGTACGGGTCGGTGTTGGAGCCCAGATTGATCGGC                                                                                                                                                   <  1:175781/130‑1                    CAGTGAACCCTTGGTGACAATGGTCACCGGGTGACGAAAACGCAGTAACACTTCGAGCAAGCGCCGGGTCAGTAACTGTTCGCGCTCGATCGGCTGGTACGGGTCGGTGTTGGAGCCCAGATTGATCGGC                                                                                                                                                   >  2:175781/1‑130                                                                                                TGTTCGCGCTCGATCGGCTGGTACGGGTCGGTGTTGGAGCCCAGATTGATCGGCGCGAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCGAC                                                    >  6:251491/1‑149                                                                                                    CGCGCTCGATCGGCTGGTACGGGTCGGTGTTGGAGCCCAGATTGATCGGCGCGAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCG                                                      >  3:29546/1‑143                                                                                                    CGCGCTCGATCGGCTGGTACGGGTCGGTGTTGGAGCCCAGATTGATCGGCGCGAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCG                                                      <  4:29546/143‑1                                                                                                                    GTACGGGTCGGTGTTGGAGCCCAGATTGATCGGCGCGAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCGACCTCGACCTGCTGGCCGAGA                                 <  5:251491/148‑1                                                                                                                                                    GCGCGAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCGACCTCGACCTGCTGGCCGAGATGGCCCGCCAGCGCCTGGCACGGGTGATGAT  >  3:355574/1‑147                                                                                                                                                    GCGCGAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCGACCTCGACCTGCTGGCCGAGATGGCCCGCCAGCGCCTGGCACGGGTGATGAT  >  4:117486/1‑147                                                                                                                                                    GCGCGAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCGACCTCGACCTGCTGGCCGAGATGGCCCGCCAGCGCCTGGCACGGGTGATGAT  >  6:15086/1‑147                                                                                                                                                        GAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCGACCTCGACCTGCTGGCCGAGA                                 <  5:377996/112‑1                                                                                                                                                        GAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCGACCTCGACCTGCTGGCCGAGA                                 >  6:377996/1‑112                                                                                                                                                                                                                                                                                                        GGTCGAGGTCGCGCAGCACCAGTGAACCCTTGGTGACAATGGTCACCGGGTGACGAAAACGCAGTAACACTTCGAGCAAGCGCCGGGTCAGTAACTGTTCGCGCTCGATCGGCTGGTACGGGTCGGTGTTGGAGCCCAGATTGATCGGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/104358‑104207 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgAACAGTTACTGACCCGGCGCTTGCTCGAAGTGTTACTGCGTTTTCGTCACCCGGTGACCATTGTCACCAAGGGTTCACTGGTGCTGCGCGACCTCGACCTGCTGGCCGAGATGGCCCGCCAGCGCCTGGCACGGGTGATGAT  >  NC_002947/104260‑104401

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.