| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 295175 = | 68 (1.160) | 4 (0.070) | 4/248 | NT | 5.9% | coding (579/813 nt) | ssuB | aliphatic sulfonates ABC transporter ATP‑binding protein SsuB |
| ? | NC_002947 | 295216 = | 63 (1.110) | coding (620/813 nt) | ssuB | aliphatic sulfonates ABC transporter ATP‑binding protein SsuB | |||||
AGCACTTCGCTTTCCAGCGCGGCCAGACGGTGCGAACCACGCGCCCGGGGCCGTGCCAGGTCAACAGTGAGGTCGAGCCCGACCTCGCCGTCCTCGATCAGGATCACCCGGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/295324‑295175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccGGGTGATCCTGATCGAGGACGGCGAGGTCGGGCTCGACCTCACTGTTGACCTGGCACGGCCCCGGGCGCGTGGTTCGCACCGTCTGGCCGCGCTGGAAAGCGAAGTGCTCAACCGTGTTCTGTCCACCCCGGGCACTGCGCCC > NC_002947/295216‑295358 AGCACTTCGCTTTCCAGCGCGTCCAGACGGTGCGAACCACGCGCCCGGGGCCGTGCCAGGTCAACAGTGAGGTCGAGCCCGACCTCGCCGTCCTCGATCAGGATCACCCGGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGA < 7:326285/148‑1AGCACTTCGCTTTCCAGCGCGGCCAGACGGTGCGAACCACGCGCCCGGGGCCGTGCCAGGTCAACAGTGAGGTCGAGCCCGACCTCGCCGTCCTCGATCAGGATCACCCGGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGAC < 3:233364/149‑1AGCACTTCGCTTTCCAGCGCGGCCAGACGGTGCGAACCACGCGCCCGGGGCCGTGCCAGGTCAACAGTGAGGTCGAGCCCGACCTCGCCGTCCTCGATCAGGATCACCCGGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGA < 6:175354/148‑1AGCACTTCGCTTTCCAGCGCGGCCAGACGGTGCGAACCACGCGCCCGGGGCCGTGCCAGGTCAACAGTGAGGTCGAGCCCGACCTCGCCGTCCTCGATCAGGATCACCCGGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGA < 7:2358/148‑1 GCACTTCGCTTTCCAGCGCGGCGAGACGGTGCGAACCACGCGCCCGGGGCCGTGCCAGGTCAACAGTGAGGTCGAGCCCGACCTCGCCGTCCTCGATCAGGATCACCCGGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGAC > 7:157432/1‑148 CCGGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGACCGGGTGATCCTGATCGAGGACGGCGAGGTCGGGCTCGACCTCACTGTTGACCTGGCACGGCCCCGGGCGCGTGGTTCGCACCGTCTGGCCGCGC < 1:151242/136‑1 CCGGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGACCGGGTGATCCTGATCGAGGACGGCGAGGTCGGGCTCGACCTCACTGTTGACCTGGCACGGCCCCGGGCGCGTGGTTCGCACCGTCTGGCCGCGC > 2:151242/1‑136 CGGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGACCGGGTGATCCTGATCGAGGACGGCGAGGTCGGGCTCGACCTCACTGTTGACCTGGCACGGCCCCGGGCGCGTGGTTCGCACCGTCTGGCCGCGCTGGAAAGCGAAGTG > 5:79740/1‑149 GGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGACCGGGTGATCCTGATCGAGGACGGCGAGGTCGGGCTCGACCTCACTGTTGACCTGGCACGGCCCCGGGCGCGTGGTTCGCACCGTCTGGCCGCGCTGGAAAGCGAAGTGC > 1:175929/1‑149 TGACCGGGTGATCCTGATCGAGGACGGCGAGGTCGGGCTCGACCTCACTGTTGACCTGGCACGGCCCCGGGCGCGTGGTTCGCACCGTCTGGCCGCGCTGGAAAGCGAAGTGCTCAACCGTGTTCTGTCCACCCCGGGCACTGCGCCC > 7:248739/1‑148 AGCACTTCGCTTTCCAGCGCGGCCAGACGGTGCGAACCACGCGCCCGGGGCCGTGCCAGGTCAACAGTGAGGTCGAGCCCGACCTCGCCGTCCTCGATCAGGATCACCCGGTCAGCCACGGCAACCGCCTCGCTGACGTCGTGGGTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/295324‑295175‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaccGGGTGATCCTGATCGAGGACGGCGAGGTCGGGCTCGACCTCACTGTTGACCTGGCACGGCCCCGGGCGCGTGGTTCGCACCGTCTGGCCGCGCTGGAAAGCGAAGTGCTCAACCGTGTTCTGTCCACCCCGGGCACTGCGCCC > NC_002947/295216‑295358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |