New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 37977563 (1.070)5 (0.090) 5/246 NT 8.1% coding (72/1107 nt) gbcB glycine‑betaine dioxygenase subunit
?NC_002947 = 379807 53 (0.940)coding (104/1107 nt) gbcB glycine‑betaine dioxygenase subunit

GATGTCGCAGGCAGGAATGTGCGTCGTCTTCAGCTTGCGCATTATCGATGCCATGAAAAGGGCCATAGTCGGCCGCTGGAGATGAACATGTCCGATACCTTCCTCAATCCGGTCACTACCCAGACCTGGGCCAATGGCCGCCACATTGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/379623‑379775
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgcACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACAATGTGGCGGCCATTGGCCCAGGTCTGGGTAGTGACCGGATTGAGGAAGGTATCGGACATGTTCATCTCCAGCGGCCGACTATGGCCCTTTTCATGGCATCGATAAT  <  NC_002947/379807‑379663
                                                                                                                                                                                                                                                                                                          
GATGTCGCAGGCAGGAATGTGCGTCGTCTTCAGCTTGCGCATTATCGATGCCATGAAAAGGGCCATAGTCGGCCGCTGGAGATGAACATGTCCGATACCTTCCTCAATCCGGTCACTACCCAGACCTGGGCCAATGGCCGCCACATTGT                                                                                                                                                       >  6:86579/1‑149
                                             CGATGCCATGAAAAGGGCCATAGTCGGCCGCTGGAGATGAACATGTCCGATACCTTCCTCAATCCGGTCACTACCCAGACCTGGGCCAATGGCCGCCACATTGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACAAT                                                                                                          <  3:337723/149‑1
                                              GATGCCATGAAAAGGGCCATAGTCGGCCGCTGGAGATGAACATGTCCGATACCTTCCTCAATCCGGTCACTACCCAGACCTGGGCCAATGGCCGCCACATTGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACAATG                                                                                                         >  8:91575/1‑149
                                                TGCCATGAAAAGGGCCATAGTCGGCCGCTGGAGATGAACATGTCCGATACCTTCCTCAATCCGGTCACTACCCAGACCTGGGCCAATGGCCGCCACATTGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACAATGTG                                                                                                       <  7:91575/149‑1
                                                    ATGAAAAGGGCCATAGTCGGCCGCTGGAGATGAACATGTCCGATACCTTCCTCAATCCGGTCACTACCCAGACCTGGGCCAATGGCCGCCACATTGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCA                                                                                                              >  3:73351/1‑138
                                                    ATGAAAAGGGCCATAGTCGGCCGCTGGAGATGAACATGTCCGATACCTTCCTCAATCCGGTCACTACCCAGACCTGGGCCAATGGCCGCCACATTGTGCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCA                                                                                                              <  4:73351/138‑1
                                                                    TCGGCCGCTGGAGATGAACATGTCCGATACCTTCCTCAATCCGGTCACTACCCAGACCTGGGCCAATGGCCGCCACATTGT                                                                                                                                                       >  5:270933/1‑81
                                                                    TCGGCCGCTGGAGATGAACATGTCCGATACCTTCCTCAATCCGGTCACTACCCAGACCTGGGCCAATGGCCGCCACATTGT                                                                                                                                                       <  6:270933/81‑1
                                                                                                                                                     GCGCACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACAATGTGGCGGCCATTGGCCCAGGTCTGGGTAGTGACCGGATTGAGGAAGGTATCGGACATGTTCATCTCCAGCGGCCGACTATGGCCCTTTTCATGGCATCGATAAT  <  6:63637/149‑1
                                                                                                                                                                                                                                                                                                          
GATGTCGCAGGCAGGAATGTGCGTCGTCTTCAGCTTGCGCATTATCGATGCCATGAAAAGGGCCATAGTCGGCCGCTGGAGATGAACATGTCCGATACCTTCCTCAATCCGGTCACTACCCAGACCTGGGCCAATGGCCGCCACATTGTGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/379623‑379775
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgcACGTCCCAGGTCTCCTGGATGACCTTGACGCAGCGCACAATGTGGCGGCCATTGGCCCAGGTCTGGGTAGTGACCGGATTGAGGAAGGTATCGGACATGTTCATCTCCAGCGGCCGACTATGGCCCTTTTCATGGCATCGATAAT  <  NC_002947/379807‑379663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.