| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 630038 = | 54 (0.920) | 3 (0.050) | 3/244 | NT | 6.1% | coding (160/1395 nt) | eutB | ethanolamine ammonia‑lyase subunit alpha |
| ? | NC_002947 | 630134 = | 42 (0.750) | coding (64/1395 nt) | eutB | ethanolamine ammonia‑lyase subunit alpha | |||||
ATCTGGTCTACCGCTTCGACAGCCTCAAGGAAGTGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/630169‑630038‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggccaTCACTTCCTTGAGGCTGTCGAAGCGGTAGACCAGATGGCCGACCGTGTGTACGAAACTTGCCATACAGAATCTCCAGAGCCGCGGGTTGCCCCGCGGCGGGTGGCGGCGATCAGTGCAGGGCCTCTTCGGCCTTCTGGATCGCGGC > NC_002947/630134‑630279 ATCTGGTCTACCGCTTCGACAGCCTCAAGGAAGTGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTG > 1:368586/1‑128ATCTGGTCTACCGCTTCGACAGCCTCAAGGAAGTGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTG < 2:368586/128‑1 TACCGCTTCGACAGCCTCAAGGAAGTGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTGGCC > 5:146056/1‑123 TACCGCTTCGACAGCCTCAAGGAAGTGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTGGCC < 6:146056/123‑1 CGCTTCGACAGCCTCAAGGAAGTGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTGGCCA < 7:183445/121‑1 CGCTTCGACAGCCTCAAGGAAGTGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTGGCCA > 8:183445/1‑121 AGCCTCAAGGAAGTGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTT < 3:321281/107‑1 AGCCTCAAGGAAGTGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTT > 4:321281/1‑107 TGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTGGCCATCACTTCCTTGAGGCTGTCGAAGCGGTAGACCAGATGGCCGACCGTGTG > 4:298492/1‑148 GATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTGGCCATCACTTCCTTGAGGCTGTCGAAGCGGTAGACCAGATGGCCGACCGTGTGTA > 8:254066/1‑149 CGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTGGCCATCACTTCCTTGAGGCTGTCGAAGCGGTAGACCAGATGGCCGACCGTGTGTACGAAACTTGCCATACAGAATCTCCAGAGCCGCGGGTTGCCCCGCGGCGGG < 7:254066/149‑1 GGCCATCACTTCCTTGAGGCTGTCGAAGCGGTAGACCAGATGGCCGACCGTGTGTACGAAACTTGCCATACAGAATCTCCAGAGCCGCGGGTTGCCCCGCGGCGGGTGGCGGCGATCAGTGCAGGGCCTCTTCGGCCTTCTGGATCGCG > 2:94283/1‑149 CCATCACTTCCTTGAGGCTGGCGAAGCGGTAGACCAGATGGCCGACCGTGTGTACGAAACTTGCCATACAGAATCTCCACCGCCGCGGGTTGCCCCGCGGCGGGTGGCGGCGATCAGTGCAGGGCCTCTTCGGCCTTCTGGATCGCGGC < 1:369043/149‑1 CATCACTTCCTTGAGGCTGTCGAAGCGGTAGACCAGATGGCCGACCGTGTGTACGAAACTTGCCATACAGAATCTCCAGAGCCGCGGGTTGCCCCGCGGCGGGTGGCGGCGATCAGTGCAGGGCCTCTTCGGCCTTCTGGATCGCGGC > 5:246819/1‑148 ATCACTTCCTTGAGGCTGTCGAAGCGGTAGACCAGATGGCCGACCGTGTGTACGAAACTTGCCATACAGAATCTCCAGAGCCGCGGGTTGCCCCGCGGCGGGTGGCGGCGATCAGTGCAGG > 7:49044/1‑121 ATCACTTCCTTGAGGCTGTCGAAGCGGTAGACCAGATGGCCGACCGTGTGTACGAAACTTGCCATACAGAATCTCCAGAGCCGCGGGTTGCCCCGCGGCGGGTGGCGGCGATCAGTGCAGG < 8:49044/121‑1 ATCTGGTCTACCGCTTCGACAGCCTCAAGGAAGTGATGGCCAAGGCCAGCCCGGCACGCTCCGGGGACTGCCTGGCAGGCGTGGCGGCCAGCAACGACGCCGAGCGCGTCGCCGCGCAGATGGCGTTGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/630169‑630038‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttggccaTCACTTCCTTGAGGCTGTCGAAGCGGTAGACCAGATGGCCGACCGTGTGTACGAAACTTGCCATACAGAATCTCCAGAGCCGCGGGTTGCCCCGCGGCGGGTGGCGGCGATCAGTGCAGGGCCTCTTCGGCCTTCTGGATCGCGGC > NC_002947/630134‑630279 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |