New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 719133 | 59 (1.000) | 6 (0.110) | 5/244 | NT | 9.3% | coding (784/1410 nt) | PP_0613 | amidase family protein |
? | NC_002947 | = 719213 | 61 (1.100) | coding (704/1410 nt) | PP_0613 | amidase family protein |
TTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCGCTGCACCGCTTGCGCCACCAGTGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/718982‑719133 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgtagCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTGGCTCAGCCAGCAGCAAGATCTGAGCGGCCTACGCATCGCCTACAGCGCCAACTTCGGTTACGTGCAGGTCGACCCACAGATCCAGGCACTGGTG < NC_002947/719213‑719068 TTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCGCTGCACCGCTTGCGCCACCAGTGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGC > 5:301265/1‑148 TTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCGCTGCACCGCTTGCGCCACCAGTGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGC < 6:301265/148‑1 TGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCGCTGCACCGCTTGCGCCACCAGTGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCG > 8:316601/1‑148 GAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCGCTGCACCGCTTGCGCCACCAGTGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCG > 4:315673/1‑147 GAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCGCTGCACCGCTTGCGCCACCAGTGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCG > 8:109256/1‑147 AAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCGCTGCACCGCTTGCGCCACCAGTGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCGTAG > 8:127620/1‑149 AGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCGCTGCACCGCTTGCGCCACCAGTGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCGTAGCGCGCCCCGATGCCCGCGACGG > 5:29628/1‑149 CCAGCCGCGCCAGGCGCTGCACCGCTTGCGCCACCAGTGCCTGGATCTGTGCGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCGTAGCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTG > 8:44486/1‑149 ACCGCTTGCGCCACCAGTGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCGTAGCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTGGCTCAGCCAGCAGCAAGATC > 8:184005/1‑149 TGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCGTAGCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTGGCTCAGCCAGCAGCAAGATCTGAGCGGCCTACGCATC < 6:29628/149‑1 TGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCGTAGCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTGGCTCAGCCAGCAGCAAGATCTGAGCGGCCTACGCATC < 7:44486/149‑1 CTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCGTAGCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTGGCTCAGCCAGCAGCAAGATCTGAGCGGCCTACGCATCGCC < 7:184005/149‑1 CGTAGCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTGGCTCAGCCAGCAGCAAGATCTGAGCGGCCTACGCATCGCCTACAGCGCCAACTTCGGTTACGTGCAGGTCGACCCACAGATCCAGGCACT < 4:106196/147‑1 GTAGCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTGGCTCAGCCAGCAGCAAGATCTGAGCGGCCTACGCATCGCCTACAGCGCCAACTTCGGTTACGTGC > 2:268883/1‑121 GTAGCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTGGCTCAGCCAGCAGCAAGACCTGAGCGGCCTACGCATCGCCTACAGCGCCAACTTCGGTTACGTGC < 1:268883/121‑1 TAGCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTGGCTCAGCCAGCAGCAAGATCTGAGCGGCCTACGCATCGCCTACAGCGCCAACTTCGGTTACGTGCAGGTCGACCCACAGATCCAGGCACTGGTG < 2:346810/149‑1 TTGAAGGTTTCCAGCGGGTCGCTGAAGCCCGGGTCCACTTCCTCTACCTGCGCACCCAGCCGCGCCAGGCGCTGCACCGCTTGCGCCACCAGTGCCTGGATCTGTGGGTCGACCTGCACGTAACCGAAGTTGGCGCTGTAGGCGATGCGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/718982‑719133 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcgtagCGCGCCCCGATGCCCGCGACGGTTTGGCCGGCGCACCCCGGCAGGCGCCGTGGCTCAGCCAGCAGCAAGATCTGAGCGGCCTACGCATCGCCTACAGCGCCAACTTCGGTTACGTGCAGGTCGACCCACAGATCCAGGCACTGGTG < NC_002947/719213‑719068 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |