| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 805362 = | 50 (0.850) | 4 (0.070) | 4/244 | NT | 7.5% | coding (1968/2832 nt) | PP_0693 | hypothetical protein |
| ? | NC_002947 | 805389 = | 52 (0.930) | coding (1941/2832 nt) | PP_0693 | hypothetical protein | |||||
CGGCCGACCTGCCCTACGGCACGCCATACATGGAAGCCATCGACGACTCGATGGACAACCTGCTGCCGCTGCTCAATGACTACCAGGACAGCTGGCAAAGCCTTCAGCGGGTGGACAACCAGATCGAGGCGCTGTACGCCCAGGTGCGCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/805513‑805362‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctcGATCTGGTTGTCCACCCGCTGAAGGCTTTGCCAGCTGTCCTGGTAGTCATTGAGCAGCGGCAGCAGGTTGTCCATCGAGTCGTCGATGGCTTCCATGTATGGCGTGCCGTAGGGCAGGTCGGCCGGCAACAGCTGGCGACGGCGCAG > NC_002947/805389‑805535 CGGCCGACCTGCCCTACGGCACGCCATACATGGAAGCCATCGACGACTCGATGGACAACCTGCTGCCGCTGCTCAATGACTACCAGGACAGCTGGCAAAGCCTTCAGCGGGTGGACAACCAGATCGAGGCGCTGTACGCCCAGGTGCGC < 2:55839/149‑1 GGCCGACCTGCCCTACGGCACGCCATACATGGAAGCCATCGACGACTCGATGGACAACCTGCTGCCGCTGCTCAATGACTACCAGGACAGCTGGCAAAGCCTTCAGCGGGTGGACAACCAGATCGAGGCGCTGTACGCCCAGGTGCGCC < 7:14816/149‑1 CCGACCTGCCCTACGGCACGCCATACATGGAAGCCATCGACGACTCGATGGACAACCTGCTGCCGCTGCTCAATGACTACCAGGACAGCTGGCAAAGCCTTCAGCGGGTGGACAACCAGATCGAGGCGCTGTACGCCCAGGTGCGCCTC < 6:81851/149‑1 ATCGAGGCGCTGTACGCCCAGGTGCGCCTCGATCTGGTTGTCCACCCGCTGAAGGCTTTGCCAGCTGTCCTGGTAGTCATTGAGCAGCGGCAGCAGGTTGTCCATC > 3:99769/1‑106 ATCGAGGCGCTGTACGCCCAGGTGCGCCTCGATCTGGTTGTCCACCCGCTGAAGGCTTTGCCAGCTGTCCTGGTAGTCATTGAGCAGCGGCAGCAGGTTGTCCATC < 4:99769/106‑1 GAGGCGCTGTACGCCCAGGTGCGCCTCGATCTGGTTGTCCACCCGCTGAAGGCTTTGCCAGCTGTCCTGGTAGTCATTGAGCAGCGGCAGCAGGTTGTC < 5:369834/99‑1 GAGGCGCTGTACGCCCAGGTGCGCCTCGATCTGGTTGTCCACCCGCTGAAGGCTTTGCCAGCTGTCCTGGTAGTCATTGAGCAGCGGCAGCAGGTTGTC > 6:369834/1‑99 CCTCGATCTGGTTGTCCACCCGCTGAAGGCTTTGCCAGCTGTCCTGGTAGTCATTGAGCAGCGGCAGCAGGTTGTCCATCGAGTCGTCGATGGCTTCCATGTATGGCGTGCCGTAGGGCAGGTCGGCCGGCAACAGCTGGCGACGGC > 5:163680/1‑147 CCTCGATCTGGTTGTCCACCCGCTGAAGGCTTTGCCAGCTGTCCTGGTAGTCATTGAGCAGCGGCAGCAGGTTGTCCATCGAGTCGTCGATGGCTTCCATGTATGGCGTGCCGTAGGGCAGGTCGGCCGGCAACAGCTGGCGACGGC < 6:163680/147‑1 CTCGATCTGGTTGTCCACCCGCTGAAGGCTTTGCCAGCTGTCCTGGTAGTCATTGAGCAGCGGCAGCAGGTTGTCCATCGAGTCGTCGATGGCTTCCATGTATGGCGTGCCGTAGGGCAGGTCGGCCGGCAACAGCTGGCGACGGCG > 7:186876/1‑147 TCGATCTGGTTGTCCACCCGCTGAAGGCTTTGCCAGCTGTCCTGGTAGTCATTGAGCAGCGGCAGCAGGTTGTCCATCGAGTCGTCGATGGCTTCCATGTATGGCGTGCCGTAGGGCAGGTCGGCCGGCAACAGCTGGCGACGGCGCAG > 1:353654/1‑149 CGGCCGACCTGCCCTACGGCACGCCATACATGGAAGCCATCGACGACTCGATGGACAACCTGCTGCCGCTGCTCAATGACTACCAGGACAGCTGGCAAAGCCTTCAGCGGGTGGACAACCAGATCGAGGCGCTGTACGCCCAGGTGCGCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/805513‑805362‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcctcGATCTGGTTGTCCACCCGCTGAAGGCTTTGCCAGCTGTCCTGGTAGTCATTGAGCAGCGGCAGCAGGTTGTCCATCGAGTCGTCGATGGCTTCCATGTATGGCGTGCCGTAGGGCAGGTCGGCCGGCAACAGCTGGCGACGGCGCAG > NC_002947/805389‑805535 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |